RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 TMEM242Q9NWH2 141 aa5.28□□□□□ -1.56
SF3A3P1-201ENST00000446317 TEX48A0A1B0GUV7 120 aa5.27□□□□□ -1.57
SF3A3P1-201ENST00000446317 FAM104BQ5XKR9 115 aa5.27□□□□□ -1.57
SF3A3P1-201ENST00000446317 MUC7Q8TAX7 377 aa5.27□□□□□ -1.57
SF3A3P1-201ENST00000446317 WWC2-AS2Q96NR7 200 aa5.27□□□□□ -1.57
SF3A3P1-201ENST00000446317 TMEM191AQ9H0A3 160 aa5.27□□□□□ -1.57
SF3A3P1-201ENST00000446317 TRAPPC1Q9Y5R8 145 aa5.27□□□□□ -1.57
SF3A3P1-201ENST00000446317 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
SF3A3P1-201ENST00000446317 M0QY20 66 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 NPYP01303 97 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 CKS2P33552 79 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 OR10J3Q5JRS4 329 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 CEMP1Q6PRD7 247 aaPredicted RBP5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 ATP5L2Q7Z4Y8 100 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 NEXN-AS1Q8NBZ9 246 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 PTH2Q96A98 100 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 COX11Q9Y6N1 276 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 RHODO00212 210 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 TRGC2P03986 189 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 RHOHQ15669 191 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 RASL11AQ6T310 242 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 PRELID3AQ96N28 172 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 PRADC1Q9BSG0 188 aa5.26□□□□□ -1.57
SF3A3P1-201ENST00000446317 CSMD3Q7Z407 3707 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 NACAE9PAV3 2078 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 TRBV24-1A0A075B6N3 115 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 SRIP30626 198 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 ZFP2Q6ZN57 461 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 Q8N3U1 123 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 NRACQ8N912 160 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 ICOSQ9Y6W8 199 aa5.25□□□□□ -1.57
SF3A3P1-201ENST00000446317 STAB2Q8WWQ8 2551 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 TRAV9-1A0A075B6T8 112 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 A0A1B0GW15 77 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 TRBV6-4A0A1B0GX49 114 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 ZNF561-AS1K7EIQ3 104 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 TNFRSF6BO95407 300 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 TSPAN13O95857 204 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 C18orf15Q96N68 181 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 GNB1LQ9BYB4 327 aa5.24□□□□□ -1.57
SF3A3P1-201ENST00000446317 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 A4D1N5 150 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 NUPR2A6NF83 97 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 PMCHP20382 165 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 RPL36AP83881 106 aaKnown RBP5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 ESRGQ1W209 222 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 COX19Q49B96 90 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 PIK3CD-AS1Q5SR53 167 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 CASC10Q5T4H9 136 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 NIT1Q86X76 327 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 ORMDL3Q8N138 153 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 ATP6V0E2Q8NHE4 81 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 RPL36ALQ969Q0 106 aaKnown RBP5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 MRAP2Q96G30 205 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 CDIP1Q9H305 208 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 VCX2Q9H322 139 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 ST20Q9HBF5 79 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 APLNQ9ULZ1 77 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 KLK5Q9Y337 293 aaPredicted RBP5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 LYSTQ99698 3801 aa5.23□□□□□ -1.57
SF3A3P1-201ENST00000446317 IGLV2-18A0A075B6J9 118 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 TRBV7-3A0A075B6L6 115 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 IGKV2-29A2NJV5 120 aaPredicted RBP5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 SDHAF1A6NFY7 115 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 H7C1H1 209 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 HLA-DQA1P01909 254 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 IFI27P40305 119 aaPredicted RBP5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 UBE2D3P61077 147 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 UBE2D2P62837 147 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 PMCHL1Q16048 86 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 UBE2DNLQ8IWF7 75 aa5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 MRPS16Q9Y3D3 137 aaKnown RBP5.22□□□□□ -1.57
SF3A3P1-201ENST00000446317 LY6G6CO95867 125 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 IGHV3-30P01768 117 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 IGHV3-33P01772 117 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 IGHV3-30-3P0DP02 117 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 CKS1BP61024 79 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 GAGE6Q13070 117 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 MRPL23Q16540 153 aaKnown RBP5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 LYPD5Q6UWN5 251 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 TEX43Q6ZNM6 134 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 NTM-AS1Q6ZSK4 140 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 WFDC10BQ8IUB3 73 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 SIGMAR1Q99720 223 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 LINC00588Q9Y4M8 146 aa5.21□□□□□ -1.58
SF3A3P1-201ENST00000446317 M0R2N4 97 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 TSHBP01222 138 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 LINC00694P0DN24 101 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 SUMO2P61956 95 aaKnown RBP5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 RNASEKQ6P5S7 137 aaKnown RBP5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 TMEM70Q9BUB7 260 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 MAP1LC3AQ9H492 121 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 UQCR10Q9UDW1 63 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 LAMTOR2Q9Y2Q5 125 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 VPS13DQ5THJ4 4388 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 TRBV10-1A0A0K0K1A3 114 aa5.2□□□□□ -1.58
SF3A3P1-201ENST00000446317 TMEM262E9PQX1 116 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms