RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 HLA-DQA1P01909 254 aa12.24□□□□□ -0.45
COMMD1-204ENST00000445644 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
COMMD1-204ENST00000445644 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
COMMD1-204ENST00000445644 RPL39LQ96EH5 51 aaKnown RBP12.24□□□□□ -0.45
COMMD1-204ENST00000445644 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
COMMD1-204ENST00000445644 USP17L23D6RBM5 183 aa12.23□□□□□ -0.45
COMMD1-204ENST00000445644 SMIM7Q9BQ49 75 aa12.23□□□□□ -0.45
COMMD1-204ENST00000445644 A8MWL6 223 aa12.22□□□□□ -0.45
COMMD1-204ENST00000445644 REG3AQ06141 175 aa12.22□□□□□ -0.45
COMMD1-204ENST00000445644 CT83Q5H943 113 aa12.22□□□□□ -0.45
COMMD1-204ENST00000445644 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
COMMD1-204ENST00000445644 FAM229AH3BQW9 127 aa12.21□□□□□ -0.45
COMMD1-204ENST00000445644 PRSS1P07477 247 aa12.21□□□□□ -0.45
COMMD1-204ENST00000445644 SCXQ7RTU7 201 aa12.21□□□□□ -0.45
COMMD1-204ENST00000445644 PKHD1L1Q86WI1 4243 aa12.2□□□□□ -0.46
COMMD1-204ENST00000445644 IGLV10-54A0A075B6I4 117 aa12.2□□□□□ -0.46
COMMD1-204ENST00000445644 ZNF727A8MUV8 499 aa12.2□□□□□ -0.46
COMMD1-204ENST00000445644 GAS8-AS1O95177 125 aa12.2□□□□□ -0.46
COMMD1-204ENST00000445644 COTL1Q14019 142 aa12.2□□□□□ -0.46
COMMD1-204ENST00000445644 C9JQL5 133 aa12.19□□□□□ -0.46
COMMD1-204ENST00000445644 AMTP48728 403 aa12.19□□□□□ -0.46
COMMD1-204ENST00000445644 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
COMMD1-204ENST00000445644 TSKUQ8WUA8 353 aa12.18□□□□□ -0.46
COMMD1-204ENST00000445644 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
COMMD1-204ENST00000445644 SRSF3P84103 164 aaKnown RBP12.17□□□□□ -0.46
COMMD1-204ENST00000445644 LINC00528Q8N1L1 170 aa12.17□□□□□ -0.46
COMMD1-204ENST00000445644 OSTCQ9NRP0 149 aa12.17□□□□□ -0.46
COMMD1-204ENST00000445644 V9GYV3 84 aa12.17□□□□□ -0.46
COMMD1-204ENST00000445644 SMIM15Q7Z3B0 74 aa12.16□□□□□ -0.46
COMMD1-204ENST00000445644 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
COMMD1-204ENST00000445644 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
COMMD1-204ENST00000445644 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
COMMD1-204ENST00000445644 UBE2L6O14933 153 aa12.15□□□□□ -0.46
COMMD1-204ENST00000445644 CIRBP-AS1Q8TBR5 109 aa12.15□□□□□ -0.46
COMMD1-204ENST00000445644 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
COMMD1-204ENST00000445644 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.14□□□□□ -0.47
COMMD1-204ENST00000445644 TRAV8-4A0A0B4J246 113 aa12.14□□□□□ -0.47
COMMD1-204ENST00000445644 TRBV6-5A0A0K0K1A5 114 aa12.14□□□□□ -0.47
COMMD1-204ENST00000445644 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
COMMD1-204ENST00000445644 IGKV2-29A2NJV5 120 aaPredicted RBP12.14□□□□□ -0.47
COMMD1-204ENST00000445644 RPL23P62829 140 aaKnown RBP12.14□□□□□ -0.47
COMMD1-204ENST00000445644 TMEM191AQ9H0A3 160 aa12.14□□□□□ -0.47
COMMD1-204ENST00000445644 FAT3Q8TDW7 4589 aa12.13□□□□□ -0.47
COMMD1-204ENST00000445644 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
COMMD1-204ENST00000445644 NCR2O95944 276 aa12.13□□□□□ -0.47
COMMD1-204ENST00000445644 RPS10P46783 165 aaKnown RBP12.13□□□□□ -0.47
COMMD1-204ENST00000445644 KRTAP10-4P60372 401 aaPredicted RBP12.13□□□□□ -0.47
COMMD1-204ENST00000445644 TEX261Q6UWH6 196 aa12.13□□□□□ -0.47
COMMD1-204ENST00000445644 RAB4AP20338 218 aa12.12□□□□□ -0.47
COMMD1-204ENST00000445644 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
COMMD1-204ENST00000445644 DGAT2L7PQ6IED9 249 aa12.12□□□□□ -0.47
COMMD1-204ENST00000445644 C9orf163Q8N9P6 203 aa12.12□□□□□ -0.47
COMMD1-204ENST00000445644 NUP35Q8NFH5 326 aa12.12□□□□□ -0.47
COMMD1-204ENST00000445644 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
COMMD1-204ENST00000445644 TSHBP01222 138 aa12.11□□□□□ -0.47
COMMD1-204ENST00000445644 APCSP02743 223 aa12.11□□□□□ -0.47
COMMD1-204ENST00000445644 AMN1Q8IY45 258 aa12.11□□□□□ -0.47
COMMD1-204ENST00000445644 LRP1Q07954 4544 aaKnown RBP12.11□□□□□ -0.47
COMMD1-204ENST00000445644 FLG2Q5D862 2391 aaPredicted RBP12.11□□□□□ -0.47
COMMD1-204ENST00000445644 PANO1I0J062 215 aa12.1□□□□□ -0.47
COMMD1-204ENST00000445644 I3L3M4 83 aa12.1□□□□□ -0.47
COMMD1-204ENST00000445644 SLPIP03973 132 aa12.1□□□□□ -0.47
COMMD1-204ENST00000445644 FAM74A3Q4VXF1 159 aa12.1□□□□□ -0.47
COMMD1-204ENST00000445644 PLA2G1BP04054 148 aaKnown RBP12.09□□□□□ -0.47
COMMD1-204ENST00000445644 FGF6P10767 208 aa12.09□□□□□ -0.47
COMMD1-204ENST00000445644 ESDP10768 282 aa12.09□□□□□ -0.47
COMMD1-204ENST00000445644 PMCHP20382 165 aa12.09□□□□□ -0.47
COMMD1-204ENST00000445644 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
COMMD1-204ENST00000445644 ADIRFQ15847 76 aa12.09□□□□□ -0.47
COMMD1-204ENST00000445644 CLRN3Q8NCR9 226 aa12.09□□□□□ -0.47
COMMD1-204ENST00000445644 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
COMMD1-204ENST00000445644 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
COMMD1-204ENST00000445644 IGKV3OR2-268A0A0C4DH90 116 aa12.08□□□□□ -0.48
COMMD1-204ENST00000445644 SMKR1H3BMG3 65 aa12.08□□□□□ -0.48
COMMD1-204ENST00000445644 H7C423 109 aa12.08□□□□□ -0.48
COMMD1-204ENST00000445644 CNBPP62633 177 aaKnown RBP12.08□□□□□ -0.48
COMMD1-204ENST00000445644 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
COMMD1-204ENST00000445644 ST20Q9HBF5 79 aa12.08□□□□□ -0.48
COMMD1-204ENST00000445644 TMEM242Q9NWH2 141 aa12.08□□□□□ -0.48
COMMD1-204ENST00000445644 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
COMMD1-204ENST00000445644 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
COMMD1-204ENST00000445644 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
COMMD1-204ENST00000445644 RNASEKQ6P5S7 137 aaKnown RBP12.07□□□□□ -0.48
COMMD1-204ENST00000445644 SDIM1Q6ZPB5 146 aa12.07□□□□□ -0.48
COMMD1-204ENST00000445644 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
COMMD1-204ENST00000445644 NRACQ8N912 160 aa12.06□□□□□ -0.48
COMMD1-204ENST00000445644 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
COMMD1-204ENST00000445644 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
COMMD1-204ENST00000445644 SMIM27A0A1W2PRY6 76 aa12.05□□□□□ -0.48
COMMD1-204ENST00000445644 RIGQ13278 110 aa12.05□□□□□ -0.48
COMMD1-204ENST00000445644 PEA15Q15121 130 aa12.05□□□□□ -0.48
COMMD1-204ENST00000445644 CHCHD10Q8WYQ3 142 aaPredicted RBP12.05□□□□□ -0.48
COMMD1-204ENST00000445644 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
COMMD1-204ENST00000445644 OR5A1Q8NGJ0 315 aa12.03□□□□□ -0.48
COMMD1-204ENST00000445644 SMDT1Q9H4I9 107 aa12.03□□□□□ -0.48
COMMD1-204ENST00000445644 FOXI1Q12951 378 aa12.02□□□□□ -0.49
COMMD1-204ENST00000445644 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
COMMD1-204ENST00000445644 MRPL51Q4U2R6 128 aaKnown RBP12.02□□□□□ -0.49
COMMD1-204ENST00000445644 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.49
COMMD1-204ENST00000445644 FAM104BQ5XKR9 115 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms