RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 UBE2L6O14933 153 aa16.01■□□□□ 0.15
C9orf3-207ENST00000445181 Q8N976 141 aa16.01■□□□□ 0.15
C9orf3-207ENST00000445181 RMI2Q96E14 147 aa16.01■□□□□ 0.15
C9orf3-207ENST00000445181 A0A087WTM6 91 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 TRBV6-5A0A0K0K1A5 114 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 SMKR1H3BMG3 65 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 NCR2O95944 276 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 CRPP02741 224 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 PMCHP20382 165 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 KRTAP10-2P60368 255 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 FAM104BQ5XKR9 115 aa16■□□□□ 0.15
C9orf3-207ENST00000445181 RBX1P62877 108 aa15.99■□□□□ 0.15
C9orf3-207ENST00000445181 Q0VG73 95 aa15.99■□□□□ 0.15
C9orf3-207ENST00000445181 SEC11CQ9BY50 192 aa15.99■□□□□ 0.15
C9orf3-207ENST00000445181 LINC00862A6NCI5 91 aa15.98■□□□□ 0.15
C9orf3-207ENST00000445181 I3L3M4 83 aa15.98■□□□□ 0.15
C9orf3-207ENST00000445181 CDK2AP2O75956 126 aa15.98■□□□□ 0.15
C9orf3-207ENST00000445181 RPS10P46783 165 aaKnown RBP15.98■□□□□ 0.15
C9orf3-207ENST00000445181 MRPL51Q4U2R6 128 aaKnown RBP15.98■□□□□ 0.15
C9orf3-207ENST00000445181 ATP5L2Q7Z4Y8 100 aa15.98■□□□□ 0.15
C9orf3-207ENST00000445181 COX11Q9Y6N1 276 aa15.98■□□□□ 0.15
C9orf3-207ENST00000445181 IGKV2D-24A0A075B6R9 120 aa15.97■□□□□ 0.15
C9orf3-207ENST00000445181 A0A1B0GXF2 115 aa15.97■□□□□ 0.15
C9orf3-207ENST00000445181 PPP1R17O96001 155 aa15.97■□□□□ 0.15
C9orf3-207ENST00000445181 APCSP02743 223 aa15.97■□□□□ 0.15
C9orf3-207ENST00000445181 TMEM70Q9BUB7 260 aa15.96■□□□□ 0.15
C9orf3-207ENST00000445181 CKS2P33552 79 aa15.95■□□□□ 0.14
C9orf3-207ENST00000445181 ENHOQ6UWT2 76 aa15.94■□□□□ 0.14
C9orf3-207ENST00000445181 LINC00269Q8N2A0 174 aa15.94■□□□□ 0.14
C9orf3-207ENST00000445181 CLPSL2Q6UWE3 100 aa15.93■□□□□ 0.14
C9orf3-207ENST00000445181 NRACQ8N912 160 aa15.93■□□□□ 0.14
C9orf3-207ENST00000445181 C1orf43Q9BWL3 253 aa15.93■□□□□ 0.14
C9orf3-207ENST00000445181 TMEM242Q9NWH2 141 aa15.93■□□□□ 0.14
C9orf3-207ENST00000445181 LRCOL1A6NCL2 159 aa15.92■□□□□ 0.14
C9orf3-207ENST00000445181 POLR2KP53803 58 aaKnown RBP15.92■□□□□ 0.14
C9orf3-207ENST00000445181 AMMECR1LQ6DCA0 310 aa15.92■□□□□ 0.14
C9orf3-207ENST00000445181 BTF3L4Q96K17 158 aa15.92■□□□□ 0.14
C9orf3-207ENST00000445181 CTDSP1Q9GZU7 261 aa15.92■□□□□ 0.14
C9orf3-207ENST00000445181 PGPEP1Q9NXJ5 209 aa15.92■□□□□ 0.14
C9orf3-207ENST00000445181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-207ENST00000445181 A0A1B0GUV1 79 aa15.91■□□□□ 0.14
C9orf3-207ENST00000445181 IGKV2-29A2NJV5 120 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-207ENST00000445181 VCYO14598 125 aa15.91■□□□□ 0.14
C9orf3-207ENST00000445181 SUMO2P61956 95 aaKnown RBP15.91■□□□□ 0.14
C9orf3-207ENST00000445181 MIAQ16674 131 aa15.91■□□□□ 0.14
C9orf3-207ENST00000445181 KRTAP4-5Q9BYR2 181 aa15.91■□□□□ 0.14
C9orf3-207ENST00000445181 TRBV27A0A0K0K1C4 114 aa15.9■□□□□ 0.14
C9orf3-207ENST00000445181 D6R8Y8 96 aa15.9■□□□□ 0.14
C9orf3-207ENST00000445181 TSHBP01222 138 aa15.9■□□□□ 0.14
C9orf3-207ENST00000445181 FUSP35637 526 aaKnown RBP eCLIP15.9■□□□□ 0.14
C9orf3-207ENST00000445181 IMMP2LQ96T52 175 aa15.9■□□□□ 0.14
C9orf3-207ENST00000445181 RYR1P21817 5038 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 LRP1BQ9NZR2 4599 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 IGLV4-60A0A075B6I1 120 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 FCER1GP30273 86 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 RNASEKQ6P5S7 137 aaKnown RBP15.89■□□□□ 0.13
C9orf3-207ENST00000445181 C20orf203Q8NBC4 194 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 PRR34Q9NV39 138 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 DNAH5Q8TE73 4624 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 PCLOQ9Y6V0 5065 aa15.89■□□□□ 0.13
C9orf3-207ENST00000445181 H7C423 109 aa15.88■□□□□ 0.13
C9orf3-207ENST00000445181 LECT2O14960 151 aa15.88■□□□□ 0.13
C9orf3-207ENST00000445181 REG3AQ06141 175 aa15.88■□□□□ 0.13
C9orf3-207ENST00000445181 CDPF1Q6NVV7 123 aa15.88■□□□□ 0.13
C9orf3-207ENST00000445181 MAPKAPK5-AS1Q8N8E1 139 aa15.88■□□□□ 0.13
C9orf3-207ENST00000445181 BAALCQ8WXS3 180 aa15.88■□□□□ 0.13
C9orf3-207ENST00000445181 KIR2DL4Q99706 377 aa15.88■□□□□ 0.13
C9orf3-207ENST00000445181 HSPG2P98160 4391 aa15.87■□□□□ 0.13
C9orf3-207ENST00000445181 TNFRSF6BO95407 300 aa15.87■□□□□ 0.13
C9orf3-207ENST00000445181 PPBPP02775 128 aa15.87■□□□□ 0.13
C9orf3-207ENST00000445181 C10orf91Q5T1B1 145 aa15.87■□□□□ 0.13
C9orf3-207ENST00000445181 Q8N814 137 aa15.87■□□□□ 0.13
C9orf3-207ENST00000445181 C20orf78Q9BR46 151 aa15.87■□□□□ 0.13
C9orf3-207ENST00000445181 ORMDL3Q8N138 153 aa15.86■□□□□ 0.13
C9orf3-207ENST00000445181 CARHSP1Q9Y2V2 147 aaKnown RBP15.86■□□□□ 0.13
C9orf3-207ENST00000445181 TRBV24-1A0A075B6N3 115 aa15.85■□□□□ 0.13
C9orf3-207ENST00000445181 FGF6P10767 208 aa15.85■□□□□ 0.13
C9orf3-207ENST00000445181 C7orf77A4D0Y5 90 aa15.84■□□□□ 0.13
C9orf3-207ENST00000445181 HLA-DQA1P01909 254 aa15.84■□□□□ 0.13
C9orf3-207ENST00000445181 S100PP25815 95 aa15.84■□□□□ 0.13
C9orf3-207ENST00000445181 WFDC2Q14508 124 aa15.84■□□□□ 0.13
C9orf3-207ENST00000445181 TMEM136Q6ZRR5 245 aa15.84■□□□□ 0.13
C9orf3-207ENST00000445181 TMEM101Q96IK0 257 aa15.84■□□□□ 0.13
C9orf3-207ENST00000445181 IGLV10-54A0A075B6I4 117 aa15.83■□□□□ 0.12
C9orf3-207ENST00000445181 IGLV5-52A0A0A0MRZ9 124 aa15.83■□□□□ 0.12
C9orf3-207ENST00000445181 NPYP01303 97 aa15.83■□□□□ 0.12
C9orf3-207ENST00000445181 ESDP10768 282 aa15.83■□□□□ 0.12
C9orf3-207ENST00000445181 CLRN3Q8NCR9 226 aa15.83■□□□□ 0.12
C9orf3-207ENST00000445181 NTN5Q8WTR8 489 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-207ENST00000445181 PRELID3AQ96N28 172 aa15.83■□□□□ 0.12
C9orf3-207ENST00000445181 IGKV3OR2-268A0A0C4DH90 116 aa15.82■□□□□ 0.12
C9orf3-207ENST00000445181 PHOX2AO14813 284 aa15.82■□□□□ 0.12
C9orf3-207ENST00000445181 ZNF25P17030 456 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-207ENST00000445181 RHEBQ15382 184 aa15.82■□□□□ 0.12
C9orf3-207ENST00000445181 RPS10P5Q9NQ39 176 aa15.82■□□□□ 0.12
C9orf3-207ENST00000445181 TRAV8-4A0A0B4J246 113 aa15.81■□□□□ 0.12
C9orf3-207ENST00000445181 RPL32P62910 135 aaKnown RBP15.81■□□□□ 0.12
C9orf3-207ENST00000445181 SMIM2Q9BVW6 85 aa15.81■□□□□ 0.12
C9orf3-207ENST00000445181 TRAV9-1A0A075B6T8 112 aa15.8■□□□□ 0.12
C9orf3-207ENST00000445181 NDUFA5Q16718 116 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms