RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 COTL1Q14019 142 aa11.82□□□□□ -0.52
LIME1-202ENST00000444951 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
LIME1-202ENST00000444951 ALKBH7Q9BT30 221 aaPredicted RBP11.82□□□□□ -0.52
LIME1-202ENST00000444951 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
LIME1-202ENST00000444951 I3L3M4 83 aa11.81□□□□□ -0.52
LIME1-202ENST00000444951 VCYO14598 125 aa11.81□□□□□ -0.52
LIME1-202ENST00000444951 PHOX2AO14813 284 aa11.81□□□□□ -0.52
LIME1-202ENST00000444951 POLR2KP53803 58 aaKnown RBP11.81□□□□□ -0.52
LIME1-202ENST00000444951 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
LIME1-202ENST00000444951 LELP1Q5T871 98 aa11.8□□□□□ -0.52
LIME1-202ENST00000444951 NTM-AS1Q6ZSK4 140 aa11.8□□□□□ -0.52
LIME1-202ENST00000444951 SMIM2Q9BVW6 85 aa11.8□□□□□ -0.52
LIME1-202ENST00000444951 MRPS16Q9Y3D3 137 aaKnown RBP11.8□□□□□ -0.52
LIME1-202ENST00000444951 TRBV6-8A0A0A6YYG3 113 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 TRAV8-6A0A0B4J262 113 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 TSHBP01222 138 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 FCER1GP30273 86 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 AMTP48728 403 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 TIRAPP58753 221 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 WFDC10BQ8IUB3 73 aa11.79□□□□□ -0.52
LIME1-202ENST00000444951 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
LIME1-202ENST00000444951 TRBV27A0A0K0K1C4 114 aa11.78□□□□□ -0.52
LIME1-202ENST00000444951 TMEM97Q5BJF2 176 aa11.78□□□□□ -0.52
LIME1-202ENST00000444951 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
LIME1-202ENST00000444951 CHCHD5Q9BSY4 110 aa11.78□□□□□ -0.52
LIME1-202ENST00000444951 TRBV25-1A0A075B6N4 114 aa11.77□□□□□ -0.53
LIME1-202ENST00000444951 TCAPO15273 167 aa11.77□□□□□ -0.53
LIME1-202ENST00000444951 IFI27P40305 119 aaPredicted RBP11.77□□□□□ -0.53
LIME1-202ENST00000444951 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
LIME1-202ENST00000444951 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
LIME1-202ENST00000444951 TMEM243Q9BU79 118 aa11.76□□□□□ -0.53
LIME1-202ENST00000444951 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
LIME1-202ENST00000444951 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
LIME1-202ENST00000444951 GAGE6Q13070 117 aa11.75□□□□□ -0.53
LIME1-202ENST00000444951 Q8N8P6 123 aa11.75□□□□□ -0.53
LIME1-202ENST00000444951 ABCA13Q86UQ4 5058 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
LIME1-202ENST00000444951 A0A1B0GVY2 172 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
LIME1-202ENST00000444951 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 UBE2L6O14933 153 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 SIVA1O15304 175 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 IGHV3-30P01768 117 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 IGHV3-33P01772 117 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 IGHV3-30-3P0DP02 117 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 IGHV3-30-5P0DP03 117 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 Q8N3U1 123 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 C18orf32Q8TCD1 76 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 Q9H8V8 135 aa11.74□□□□□ -0.53
LIME1-202ENST00000444951 NXT2Q9NPJ8 142 aaKnown RBP11.74□□□□□ -0.53
LIME1-202ENST00000444951 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
LIME1-202ENST00000444951 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
LIME1-202ENST00000444951 CHCHD7Q9BUK0 85 aa11.73□□□□□ -0.53
LIME1-202ENST00000444951 A0A087WX48 190 aa11.71□□□□□ -0.53
LIME1-202ENST00000444951 M0R2N4 97 aa11.71□□□□□ -0.53
LIME1-202ENST00000444951 RTL8CO15255 209 aa11.71□□□□□ -0.53
LIME1-202ENST00000444951 NIT1Q86X76 327 aa11.71□□□□□ -0.53
LIME1-202ENST00000444951 RNASEKQ6P5S7 137 aaKnown RBP11.7□□□□□ -0.54
LIME1-202ENST00000444951 ESDP10768 282 aa11.69□□□□□ -0.54
LIME1-202ENST00000444951 LAGE3Q14657 143 aa11.69□□□□□ -0.54
LIME1-202ENST00000444951 MPV17L2Q567V2 206 aa11.69□□□□□ -0.54
LIME1-202ENST00000444951 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
LIME1-202ENST00000444951 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
LIME1-202ENST00000444951 BAGE3Q86Y29 109 aa11.69□□□□□ -0.54
LIME1-202ENST00000444951 Q8N976 141 aa11.69□□□□□ -0.54
LIME1-202ENST00000444951 HSPG2P98160 4391 aa11.68□□□□□ -0.54
LIME1-202ENST00000444951 DNAH10OSP0CZ25 163 aa11.68□□□□□ -0.54
LIME1-202ENST00000444951 RPL39P62891 51 aaKnown RBP11.68□□□□□ -0.54
LIME1-202ENST00000444951 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
LIME1-202ENST00000444951 C1orf196B1AJZ1 125 aa11.67□□□□□ -0.54
LIME1-202ENST00000444951 LINC00614P0C842 121 aa11.67□□□□□ -0.54
LIME1-202ENST00000444951 FGF6P10767 208 aa11.67□□□□□ -0.54
LIME1-202ENST00000444951 BTF3P20290 206 aaKnown RBP11.67□□□□□ -0.54
LIME1-202ENST00000444951 RBX1P62877 108 aa11.67□□□□□ -0.54
LIME1-202ENST00000444951 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
LIME1-202ENST00000444951 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
LIME1-202ENST00000444951 URB1-AS1Q96HZ7 61 aa11.67□□□□□ -0.54
LIME1-202ENST00000444951 RAB5BP61020 215 aa11.66□□□□□ -0.54
LIME1-202ENST00000444951 PKIAP61925 76 aa11.66□□□□□ -0.54
LIME1-202ENST00000444951 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
LIME1-202ENST00000444951 AP5S1Q9NUS5 200 aa11.66□□□□□ -0.54
LIME1-202ENST00000444951 LRP1BQ9NZR2 4599 aa11.66□□□□□ -0.54
LIME1-202ENST00000444951 NBDYA0A0U1RRE5 68 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 PRSS29PA6NIE9 313 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BKO60814 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BJP06899 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BOP23527 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BBP33778 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BDP58876 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BCP62807 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 PMCHL1Q16048 86 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST2H2BEQ16778 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BHQ93079 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BNQ99877 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 HIST1H2BMQ99879 126 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 KLK12Q9UKR0 248 aa11.65□□□□□ -0.54
LIME1-202ENST00000444951 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms