RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 TCTAP57738 103 aa13.52□□□□□ -0.25
SEMA3D-202ENST00000444867 K7EQD1 137 aa13.51□□□□□ -0.25
SEMA3D-202ENST00000444867 CRYBA4P53673 196 aa13.51□□□□□ -0.25
SEMA3D-202ENST00000444867 WIPF1O43516 503 aa13.5□□□□□ -0.25
SEMA3D-202ENST00000444867 COTL1Q14019 142 aa13.5□□□□□ -0.25
SEMA3D-202ENST00000444867 BVES-AS1Q5T3Y7 98 aa13.5□□□□□ -0.25
SEMA3D-202ENST00000444867 HIGD1BQ9P298 99 aa13.5□□□□□ -0.25
SEMA3D-202ENST00000444867 IGLV4-69A0A075B6H9 119 aa13.5□□□□□ -0.25
SEMA3D-202ENST00000444867 Q9UF83 564 aa13.5□□□□□ -0.25
SEMA3D-202ENST00000444867 TRBV7-3A0A075B6L6 115 aa13.49□□□□□ -0.25
SEMA3D-202ENST00000444867 SMIM9A6NGZ8 99 aa13.49□□□□□ -0.25
SEMA3D-202ENST00000444867 RPL36AP83881 106 aaKnown RBP13.49□□□□□ -0.25
SEMA3D-202ENST00000444867 KIR2DL5BQ8NHK3 375 aa13.49□□□□□ -0.25
SEMA3D-202ENST00000444867 RPL36ALQ969Q0 106 aaKnown RBP13.49□□□□□ -0.25
SEMA3D-202ENST00000444867 CHCHD7Q9BUK0 85 aa13.49□□□□□ -0.25
SEMA3D-202ENST00000444867 ATRQ13535 2644 aa13.48□□□□□ -0.25
SEMA3D-202ENST00000444867 IGLV4-3A0A075B6K6 122 aa13.48□□□□□ -0.25
SEMA3D-202ENST00000444867 TRGV2A0A075B6R0 118 aa13.48□□□□□ -0.25
SEMA3D-202ENST00000444867 E9PLD3 99 aa13.48□□□□□ -0.25
SEMA3D-202ENST00000444867 HSD52Q0P140 79 aa13.48□□□□□ -0.25
SEMA3D-202ENST00000444867 SPANXA1Q9NS26 97 aa13.48□□□□□ -0.25
SEMA3D-202ENST00000444867 GAGE12BA1L429 117 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 C11orf86A6NJI1 115 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 GAGE7O76087 117 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 GAGE12FP0CL80 117 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 GAGE12GP0CL81 117 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 GAGE12IP0CL82 117 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 NFE4Q86UQ8 179 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 ZNRF2Q8NHG8 242 aa13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 FBN1P35555 2871 aaKnown RBP13.47□□□□□ -0.25
SEMA3D-202ENST00000444867 HERVK_113P61574 105 aa13.46□□□□□ -0.25
SEMA3D-202ENST00000444867 DAZ4Q86SG3 579 aaKnown RBP13.46□□□□□ -0.25
SEMA3D-202ENST00000444867 OR11H2Q8NH07 326 aa13.46□□□□□ -0.25
SEMA3D-202ENST00000444867 VCX2Q9H322 139 aa13.46□□□□□ -0.25
SEMA3D-202ENST00000444867 DAZ3Q9NR90 486 aaKnown RBP13.46□□□□□ -0.25
SEMA3D-202ENST00000444867 TRBV6-4A0A1B0GX49 114 aa13.46□□□□□ -0.26
SEMA3D-202ENST00000444867 APOC4P55056 127 aa13.46□□□□□ -0.26
SEMA3D-202ENST00000444867 SLC25A29Q8N8R3 303 aa13.46□□□□□ -0.26
SEMA3D-202ENST00000444867 PHLDA1Q8WV24 401 aaPredicted RBP13.46□□□□□ -0.26
SEMA3D-202ENST00000444867 SEC11AP67812 179 aa13.45□□□□□ -0.26
SEMA3D-202ENST00000444867 AMELXQ99217 191 aa13.45□□□□□ -0.26
SEMA3D-202ENST00000444867 UBE2D3P61077 147 aa13.44□□□□□ -0.26
SEMA3D-202ENST00000444867 UBE2D2P62837 147 aa13.44□□□□□ -0.26
SEMA3D-202ENST00000444867 OPRPNQ99935 248 aaPredicted RBP13.44□□□□□ -0.26
SEMA3D-202ENST00000444867 UBE2D4Q9Y2X8 147 aa13.44□□□□□ -0.26
SEMA3D-202ENST00000444867 TRBV25-1A0A075B6N4 114 aa13.43□□□□□ -0.26
SEMA3D-202ENST00000444867 TRAV8-6A0A0B4J262 113 aa13.43□□□□□ -0.26
SEMA3D-202ENST00000444867 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
SEMA3D-202ENST00000444867 LINC00612Q8N6U2 182 aa13.43□□□□□ -0.26
SEMA3D-202ENST00000444867 TIMM21Q9BVV7 248 aa13.43□□□□□ -0.26
SEMA3D-202ENST00000444867 X6R8D5 127 aa13.43□□□□□ -0.26
SEMA3D-202ENST00000444867 PRADC1Q9BSG0 188 aa13.42□□□□□ -0.26
SEMA3D-202ENST00000444867 TTTY13Q9BZ97 58 aa13.42□□□□□ -0.26
SEMA3D-202ENST00000444867 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
SEMA3D-202ENST00000444867 MAPKAPK5-AS1Q8N8E1 139 aa13.42□□□□□ -0.26
SEMA3D-202ENST00000444867 ORAOV1Q8WV07 137 aa13.42□□□□□ -0.26
SEMA3D-202ENST00000444867 CHAC1Q9BUX1 264 aa13.42□□□□□ -0.26
SEMA3D-202ENST00000444867 TRGV4A0A0C4DH28 118 aa13.41□□□□□ -0.26
SEMA3D-202ENST00000444867 MYMXA0A1B0GTQ4 84 aa13.41□□□□□ -0.26
SEMA3D-202ENST00000444867 FAM104AQ969W3 186 aa13.41□□□□□ -0.26
SEMA3D-202ENST00000444867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.4□□□□□ -0.26
SEMA3D-202ENST00000444867 IGKV2-29A2NJV5 120 aaPredicted RBP13.4□□□□□ -0.26
SEMA3D-202ENST00000444867 EMP1P54849 157 aa13.4□□□□□ -0.26
SEMA3D-202ENST00000444867 MRPS36P82909 103 aaKnown RBP13.4□□□□□ -0.26
SEMA3D-202ENST00000444867 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
SEMA3D-202ENST00000444867 ZMAT5Q9UDW3 170 aaKnown RBP13.4□□□□□ -0.26
SEMA3D-202ENST00000444867 FHL2Q14192 279 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 TAL2Q16559 108 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 TMEM170BQ5T4T1 132 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 GTSF1LQ9H1H1 148 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 GAGE12JA6NER3 117 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 GAGE1Q13065 139 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 GAGE4Q13068 117 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 GAGE5Q13069 117 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 GAGE13Q4V321 117 aa13.39□□□□□ -0.27
SEMA3D-202ENST00000444867 A6NDN8 102 aa13.38□□□□□ -0.27
SEMA3D-202ENST00000444867 COX11Q9Y6N1 276 aa13.38□□□□□ -0.27
SEMA3D-202ENST00000444867 LYRM9A8MSI8 78 aa13.37□□□□□ -0.27
SEMA3D-202ENST00000444867 A0A0J9YXV3 536 aa13.36□□□□□ -0.27
SEMA3D-202ENST00000444867 TMEM223A0PJW6 202 aa13.36□□□□□ -0.27
SEMA3D-202ENST00000444867 CEMP1Q6PRD7 247 aaPredicted RBP13.36□□□□□ -0.27
SEMA3D-202ENST00000444867 SHISA2Q6UWI4 295 aa13.36□□□□□ -0.27
SEMA3D-202ENST00000444867 CSDC2Q9Y534 153 aaKnown RBP13.36□□□□□ -0.27
SEMA3D-202ENST00000444867 COL6A5A8TX70 2615 aa13.36□□□□□ -0.27
SEMA3D-202ENST00000444867 ZNF22P17026 224 aaPredicted RBP13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 DGAT2L7PQ6IED9 249 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 SBSPONQ8IVN8 264 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 TENM1Q9UKZ4 2725 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 NOTCH3Q9UM47 2321 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 TINCRA0A1B0GVN0 87 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 ZNF815PA8K554 130 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 TAX1BP3O14907 124 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 DEFB135Q30KP9 77 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 Q6ZUT4 128 aa13.35□□□□□ -0.27
SEMA3D-202ENST00000444867 H7C423 109 aa13.34□□□□□ -0.27
SEMA3D-202ENST00000444867 LEPROTO15243 131 aa13.34□□□□□ -0.27
SEMA3D-202ENST00000444867 DEFB130BP0DP73 79 aa13.34□□□□□ -0.27
SEMA3D-202ENST00000444867 DEFB130AP0DP74 79 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms