RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ISOC2Q96AB3 205 aa7.14□□□□□ -1.27
SF3A1-203ENST00000444440 CHCHD5Q9BSY4 110 aa7.14□□□□□ -1.27
SF3A1-203ENST00000444440 TMEM70Q9BUB7 260 aa7.14□□□□□ -1.27
SF3A1-203ENST00000444440 SRRM2Q9UQ35 2752 aaKnown RBP7.14□□□□□ -1.27
SF3A1-203ENST00000444440 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 Q0VG73 95 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 RIGQ13278 110 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 ATRAIDQ6UW56 229 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 Q8N976 141 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 DEFB104AQ8WTQ1 72 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 V9GYV3 84 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
SF3A1-203ENST00000444440 Q6ZSA8 131 aa7.12□□□□□ -1.27
SF3A1-203ENST00000444440 GATD1Q8NB37 220 aa7.12□□□□□ -1.27
SF3A1-203ENST00000444440 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
SF3A1-203ENST00000444440 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
SF3A1-203ENST00000444440 FLG2Q5D862 2391 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-203ENST00000444440 GAGE6Q13070 117 aa7.11□□□□□ -1.27
SF3A1-203ENST00000444440 COTL1Q14019 142 aa7.11□□□□□ -1.27
SF3A1-203ENST00000444440 IQCJQ1A5X6 159 aa7.11□□□□□ -1.27
SF3A1-203ENST00000444440 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
SF3A1-203ENST00000444440 CLPSL2Q6UWE3 100 aa7.11□□□□□ -1.27
SF3A1-203ENST00000444440 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
SF3A1-203ENST00000444440 TMEM191AQ9H0A3 160 aa7.11□□□□□ -1.27
SF3A1-203ENST00000444440 SMIM27A0A1W2PRY6 76 aa7.1□□□□□ -1.27
SF3A1-203ENST00000444440 CRPP02741 224 aa7.1□□□□□ -1.27
SF3A1-203ENST00000444440 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
SF3A1-203ENST00000444440 RBX1P62877 108 aa7.1□□□□□ -1.27
SF3A1-203ENST00000444440 CLLU1Q5K131 121 aa7.1□□□□□ -1.27
SF3A1-203ENST00000444440 TMEM243Q9BU79 118 aa7.1□□□□□ -1.27
SF3A1-203ENST00000444440 TRAV26-2A0A0B4J265 109 aa7.09□□□□□ -1.27
SF3A1-203ENST00000444440 A0A1B0GW15 77 aa7.09□□□□□ -1.27
SF3A1-203ENST00000444440 UBE2L6O14933 153 aa7.09□□□□□ -1.27
SF3A1-203ENST00000444440 PPP1R2P9O14990 202 aa7.09□□□□□ -1.27
SF3A1-203ENST00000444440 S100A8P05109 93 aa7.09□□□□□ -1.27
SF3A1-203ENST00000444440 INAFM2P0DMQ5 153 aa7.09□□□□□ -1.27
SF3A1-203ENST00000444440 MRAP2Q96G30 205 aa7.09□□□□□ -1.27
SF3A1-203ENST00000444440 NCR2O95944 276 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 PPP1R17O96001 155 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 RAB4AP20338 218 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 PMCHP20382 165 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 AMTP48728 403 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 PNRC1Q12796 327 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-203ENST00000444440 LINC00269Q8N2A0 174 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 C1orf43Q9BWL3 253 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 PRR34Q9NV39 138 aa7.08□□□□□ -1.28
SF3A1-203ENST00000444440 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 A0A1B0GUV1 79 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 I3L3M4 83 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 HLA-DQA1P01909 254 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 MT-ND4LP03901 98 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 MIAQ16674 131 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 SCXQ7RTU7 201 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 C20orf203Q8NBC4 194 aa7.07□□□□□ -1.28
SF3A1-203ENST00000444440 RPL39LQ96EH5 51 aaKnown RBP7.07□□□□□ -1.28
SF3A1-203ENST00000444440 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
SF3A1-203ENST00000444440 SDHAF1A6NFY7 115 aa7.06□□□□□ -1.28
SF3A1-203ENST00000444440 USP17L23D6RBM5 183 aa7.06□□□□□ -1.28
SF3A1-203ENST00000444440 F8W036 122 aa7.06□□□□□ -1.28
SF3A1-203ENST00000444440 CAMPP49913 170 aa7.06□□□□□ -1.28
SF3A1-203ENST00000444440 UQCC3Q6UW78 93 aa7.06□□□□□ -1.28
SF3A1-203ENST00000444440 AMN1Q8IY45 258 aa7.06□□□□□ -1.28
SF3A1-203ENST00000444440 IGLV10-54A0A075B6I4 117 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 H7C423 109 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 GAS8-AS1O95177 125 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 APCSP02743 223 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 PRSS1P07477 247 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 AMMECR1LQ6DCA0 310 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 ANAPC16Q96DE5 110 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 RNF185Q96GF1 192 aa7.05□□□□□ -1.28
SF3A1-203ENST00000444440 TRAV8-4A0A0B4J246 113 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 LINC00862A6NCI5 91 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 VCYO14598 125 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-203ENST00000444440 HBBP68871 147 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 IFITM2Q01629 132 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 C14orf177Q52M58 125 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 FAM104BQ5XKR9 115 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 LINC00528Q8N1L1 170 aa7.04□□□□□ -1.28
SF3A1-203ENST00000444440 CKS2P33552 79 aa7.03□□□□□ -1.28
SF3A1-203ENST00000444440 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
SF3A1-203ENST00000444440 REG3AQ06141 175 aa7.03□□□□□ -1.28
SF3A1-203ENST00000444440 MRPL54Q6P161 138 aaKnown RBP7.03□□□□□ -1.28
SF3A1-203ENST00000444440 ATP5L2Q7Z4Y8 100 aa7.03□□□□□ -1.28
SF3A1-203ENST00000444440 CIRBP-AS1Q8TBR5 109 aa7.03□□□□□ -1.28
SF3A1-203ENST00000444440 TRBV27A0A0K0K1C4 114 aa7.02□□□□□ -1.29
SF3A1-203ENST00000444440 PANO1I0J062 215 aa7.02□□□□□ -1.29
SF3A1-203ENST00000444440 FCER1GP30273 86 aa7.02□□□□□ -1.29
SF3A1-203ENST00000444440 SMAGPQ0VAQ4 97 aa7.02□□□□□ -1.29
SF3A1-203ENST00000444440 MRPL51Q4U2R6 128 aaKnown RBP7.02□□□□□ -1.29
SF3A1-203ENST00000444440 RNASEKQ6P5S7 137 aaKnown RBP7.02□□□□□ -1.29
SF3A1-203ENST00000444440 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
SF3A1-203ENST00000444440 BTF3L4Q96K17 158 aa7.02□□□□□ -1.29
SF3A1-203ENST00000444440 CHAC1Q9BUX1 264 aa7.02□□□□□ -1.29
SF3A1-203ENST00000444440 DMBT1Q9UGM3 2413 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-203ENST00000444440 TMEM218A2RU14 115 aa7.01□□□□□ -1.29
SF3A1-203ENST00000444440 TCAPO15273 167 aa7.01□□□□□ -1.29
SF3A1-203ENST00000444440 PPBPP02775 128 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms