RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 NDUFA5Q16718 116 aa9.33□□□□□ -0.92
TREX1-202ENST00000444177 TMEM97Q5BJF2 176 aa9.33□□□□□ -0.92
TREX1-202ENST00000444177 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
TREX1-202ENST00000444177 UBE2WQ96B02 151 aa9.33□□□□□ -0.92
TREX1-202ENST00000444177 TRAV9-1A0A075B6T8 112 aa9.32□□□□□ -0.92
TREX1-202ENST00000444177 A0A1B0GXF2 115 aa9.32□□□□□ -0.92
TREX1-202ENST00000444177 HBBP68871 147 aa9.32□□□□□ -0.92
TREX1-202ENST00000444177 ELOBQ15370 118 aa9.32□□□□□ -0.92
TREX1-202ENST00000444177 NIT2Q9NQR4 276 aa9.32□□□□□ -0.92
TREX1-202ENST00000444177 TRBV25-1A0A075B6N4 114 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 TRAV26-2A0A0B4J265 109 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 PKIAP61925 76 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 MPV17L2Q567V2 206 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 SVBPQ8N300 66 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 CLRN3Q8NCR9 226 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 RMI2Q96E14 147 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 BTF3L4Q96K17 158 aa9.31□□□□□ -0.92
TREX1-202ENST00000444177 IGKV2D-24A0A075B6R9 120 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 IGLV5-52A0A0A0MRZ9 124 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 C7orf77A4D0Y5 90 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 SNAPINO95295 136 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 CRPP02741 224 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
TREX1-202ENST00000444177 RAB4AP20338 218 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 GAGE6Q13070 117 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 Q8N814 137 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 RNF185Q96GF1 192 aa9.3□□□□□ -0.92
TREX1-202ENST00000444177 DMBT1Q9UGM3 2413 aaPredicted RBP9.29□□□□□ -0.92
TREX1-202ENST00000444177 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
TREX1-202ENST00000444177 LECT2O14960 151 aa9.29□□□□□ -0.92
TREX1-202ENST00000444177 PPP1R17O96001 155 aa9.29□□□□□ -0.92
TREX1-202ENST00000444177 CAMPP49913 170 aa9.29□□□□□ -0.92
TREX1-202ENST00000444177 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
TREX1-202ENST00000444177 MRPL54Q6P161 138 aaKnown RBP9.29□□□□□ -0.92
TREX1-202ENST00000444177 Q8N976 141 aa9.29□□□□□ -0.92
TREX1-202ENST00000444177 NTN5Q8WTR8 489 aaPredicted RBP9.29□□□□□ -0.92
TREX1-202ENST00000444177 COX11Q9Y6N1 276 aa9.29□□□□□ -0.92
TREX1-202ENST00000444177 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 APOC3P02656 99 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 S100PP25815 95 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 Q0VG73 95 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 WFDC2Q14508 124 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 ATRAIDQ6UW56 229 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
TREX1-202ENST00000444177 FLG2Q5D862 2391 aaPredicted RBP9.28□□□□□ -0.92
TREX1-202ENST00000444177 SMR3BP02814 79 aaPredicted RBP9.27□□□□□ -0.93
TREX1-202ENST00000444177 INAFM2P0DMQ5 153 aa9.27□□□□□ -0.93
TREX1-202ENST00000444177 RBX1P62877 108 aa9.27□□□□□ -0.93
TREX1-202ENST00000444177 Q5VSD8 79 aa9.27□□□□□ -0.93
TREX1-202ENST00000444177 CLPSL2Q6UWE3 100 aa9.27□□□□□ -0.93
TREX1-202ENST00000444177 RPL39LQ96EH5 51 aaKnown RBP9.27□□□□□ -0.93
TREX1-202ENST00000444177 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
TREX1-202ENST00000444177 RPS10P5Q9NQ39 176 aa9.27□□□□□ -0.93
TREX1-202ENST00000444177 HERC1Q15751 4861 aa9.27□□□□□ -0.93
TREX1-202ENST00000444177 COTL1Q14019 142 aa9.26□□□□□ -0.93
TREX1-202ENST00000444177 BAALCQ8WXS3 180 aa9.26□□□□□ -0.93
TREX1-202ENST00000444177 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
TREX1-202ENST00000444177 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.25□□□□□ -0.93
TREX1-202ENST00000444177 UBE2L6O14933 153 aa9.25□□□□□ -0.93
TREX1-202ENST00000444177 PPBPP02775 128 aa9.25□□□□□ -0.93
TREX1-202ENST00000444177 AMTP48728 403 aa9.25□□□□□ -0.93
TREX1-202ENST00000444177 HAMPP81172 84 aa9.25□□□□□ -0.93
TREX1-202ENST00000444177 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
TREX1-202ENST00000444177 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
TREX1-202ENST00000444177 SLC7A5P1Q8MH63 180 aa9.25□□□□□ -0.93
TREX1-202ENST00000444177 TMEM70Q9BUB7 260 aa9.25□□□□□ -0.93
TREX1-202ENST00000444177 VPS13BQ7Z7G8 4022 aa9.24□□□□□ -0.93
TREX1-202ENST00000444177 COX19Q49B96 90 aa9.24□□□□□ -0.93
TREX1-202ENST00000444177 ST20Q9HBF5 79 aa9.24□□□□□ -0.93
TREX1-202ENST00000444177 TRBV24-1A0A075B6N3 115 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 SDHAF1A6NFY7 115 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 PHOX2AO14813 284 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 NCR2O95944 276 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 HLA-DQA1P01909 254 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 MIAQ16674 131 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 LINC00269Q8N2A0 174 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 NRACQ8N912 160 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
TREX1-202ENST00000444177 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
TREX1-202ENST00000444177 FAM229AH3BQW9 127 aa9.22□□□□□ -0.93
TREX1-202ENST00000444177 APCSP02743 223 aa9.22□□□□□ -0.93
TREX1-202ENST00000444177 CKS2P33552 79 aa9.22□□□□□ -0.93
TREX1-202ENST00000444177 RPS10P46783 165 aaKnown RBP9.22□□□□□ -0.93
TREX1-202ENST00000444177 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
TREX1-202ENST00000444177 RPL32P62910 135 aaKnown RBP9.22□□□□□ -0.93
TREX1-202ENST00000444177 C20orf78Q9BR46 151 aa9.22□□□□□ -0.93
TREX1-202ENST00000444177 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
TREX1-202ENST00000444177 I3L3M4 83 aa9.21□□□□□ -0.94
TREX1-202ENST00000444177 GAS8-AS1O95177 125 aa9.21□□□□□ -0.94
TREX1-202ENST00000444177 SUMO2P61956 95 aaKnown RBP9.21□□□□□ -0.94
TREX1-202ENST00000444177 ORMDL3Q8N138 153 aa9.21□□□□□ -0.94
TREX1-202ENST00000444177 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.94
TREX1-202ENST00000444177 PRR34Q9NV39 138 aa9.21□□□□□ -0.94
TREX1-202ENST00000444177 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms