RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 COTL1Q14019 142 aa13.34□□□□□ -0.27
UBE2D4-205ENST00000443780 C14orf177Q52M58 125 aa13.34□□□□□ -0.27
UBE2D4-205ENST00000443780 A0A1B0GUV1 79 aa13.33□□□□□ -0.28
UBE2D4-205ENST00000443780 HLA-DQA1P01909 254 aa13.33□□□□□ -0.28
UBE2D4-205ENST00000443780 C20orf203Q8NBC4 194 aa13.33□□□□□ -0.28
UBE2D4-205ENST00000443780 RPL39LQ96EH5 51 aaKnown RBP13.33□□□□□ -0.28
UBE2D4-205ENST00000443780 OSTCQ9NRP0 149 aa13.33□□□□□ -0.28
UBE2D4-205ENST00000443780 AMTP48728 403 aa13.32□□□□□ -0.28
UBE2D4-205ENST00000443780 REG3AQ06141 175 aa13.32□□□□□ -0.28
UBE2D4-205ENST00000443780 KRTAP26-1Q6PEX3 210 aa13.32□□□□□ -0.28
UBE2D4-205ENST00000443780 TEX261Q6UWH6 196 aa13.32□□□□□ -0.28
UBE2D4-205ENST00000443780 TSKUQ8WUA8 353 aa13.32□□□□□ -0.28
UBE2D4-205ENST00000443780 IGLV4-60A0A075B6I1 120 aa13.31□□□□□ -0.28
UBE2D4-205ENST00000443780 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
UBE2D4-205ENST00000443780 FAM229AH3BQW9 127 aa13.31□□□□□ -0.28
UBE2D4-205ENST00000443780 INAFM2P0DMQ5 153 aa13.31□□□□□ -0.28
UBE2D4-205ENST00000443780 BORCS7Q96B45 105 aa13.31□□□□□ -0.28
UBE2D4-205ENST00000443780 GFRA4Q9GZZ7 299 aa13.31□□□□□ -0.28
UBE2D4-205ENST00000443780 SRRM2Q9UQ35 2752 aaKnown RBP13.31□□□□□ -0.28
UBE2D4-205ENST00000443780 FAM231BA6NCW3 169 aa13.3□□□□□ -0.28
UBE2D4-205ENST00000443780 HIGD1CA8MV81 97 aa13.3□□□□□ -0.28
UBE2D4-205ENST00000443780 UBE2L6O14933 153 aa13.3□□□□□ -0.28
UBE2D4-205ENST00000443780 A0A1B0GUT8 65 aa13.29□□□□□ -0.28
UBE2D4-205ENST00000443780 IGLV10-54A0A075B6I4 117 aa13.28□□□□□ -0.28
UBE2D4-205ENST00000443780 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
UBE2D4-205ENST00000443780 TMEM241Q24JQ0 296 aa13.28□□□□□ -0.28
UBE2D4-205ENST00000443780 FAM74A3Q4VXF1 159 aa13.28□□□□□ -0.28
UBE2D4-205ENST00000443780 FLG2Q5D862 2391 aaPredicted RBP13.28□□□□□ -0.28
UBE2D4-205ENST00000443780 SDHAF1A6NFY7 115 aa13.27□□□□□ -0.29
UBE2D4-205ENST00000443780 C9JQL5 133 aa13.27□□□□□ -0.29
UBE2D4-205ENST00000443780 NCR2O95944 276 aa13.27□□□□□ -0.29
UBE2D4-205ENST00000443780 PRSS1P07477 247 aa13.27□□□□□ -0.29
UBE2D4-205ENST00000443780 ISOC2Q96AB3 205 aa13.27□□□□□ -0.29
UBE2D4-205ENST00000443780 TMEM191AQ9H0A3 160 aa13.27□□□□□ -0.29
UBE2D4-205ENST00000443780 V9GYV3 84 aa13.27□□□□□ -0.29
UBE2D4-205ENST00000443780 TRBV6-5A0A0K0K1A5 114 aa13.25□□□□□ -0.29
UBE2D4-205ENST00000443780 RPL23P62829 140 aaKnown RBP13.25□□□□□ -0.29
UBE2D4-205ENST00000443780 GAS8-AS1O95177 125 aa13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 APCSP02743 223 aa13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 SRSF3P84103 164 aaKnown RBP13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 DGAT2L7PQ6IED9 249 aa13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 SCXQ7RTU7 201 aa13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 NUP35Q8NFH5 326 aa13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 RNF185Q96GF1 192 aa13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 NAT8Q9UHE5 227 aa13.24□□□□□ -0.29
UBE2D4-205ENST00000443780 I3L3M4 83 aa13.23□□□□□ -0.29
UBE2D4-205ENST00000443780 PEA15Q15121 130 aa13.23□□□□□ -0.29
UBE2D4-205ENST00000443780 ADIRFQ15847 76 aa13.23□□□□□ -0.29
UBE2D4-205ENST00000443780 CHAC1Q9BUX1 264 aa13.23□□□□□ -0.29
UBE2D4-205ENST00000443780 H7C423 109 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 RAB4AP20338 218 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 PMCHP20382 165 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 RIGQ13278 110 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 AMMECR1LQ6DCA0 310 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 CLRN3Q8NCR9 226 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 SMDT1Q9H4I9 107 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 ST20Q9HBF5 79 aa13.22□□□□□ -0.29
UBE2D4-205ENST00000443780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-205ENST00000443780 IGKV2-29A2NJV5 120 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-205ENST00000443780 AMN1Q8IY45 258 aa13.21□□□□□ -0.29
UBE2D4-205ENST00000443780 LINC00528Q8N1L1 170 aa13.21□□□□□ -0.29
UBE2D4-205ENST00000443780 MRAP2Q96G30 205 aa13.21□□□□□ -0.29
UBE2D4-205ENST00000443780 RPS10P46783 165 aaKnown RBP13.2□□□□□ -0.3
UBE2D4-205ENST00000443780 RNASEKQ6P5S7 137 aaKnown RBP13.2□□□□□ -0.3
UBE2D4-205ENST00000443780 C9orf163Q8N9P6 203 aa13.2□□□□□ -0.3
UBE2D4-205ENST00000443780 NAT8BQ9UHF3 227 aa13.2□□□□□ -0.3
UBE2D4-205ENST00000443780 FGF6P10767 208 aa13.19□□□□□ -0.3
UBE2D4-205ENST00000443780 POLR2KP53803 58 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-205ENST00000443780 DMBT1Q9UGM3 2413 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-205ENST00000443780 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
UBE2D4-205ENST00000443780 TSHBP01222 138 aa13.18□□□□□ -0.3
UBE2D4-205ENST00000443780 PLA2G1BP04054 148 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-205ENST00000443780 CIRBP-AS1Q8TBR5 109 aa13.18□□□□□ -0.3
UBE2D4-205ENST00000443780 SMIM27A0A1W2PRY6 76 aa13.17□□□□□ -0.3
UBE2D4-205ENST00000443780 hDV102S1A0JD36 115 aa13.17□□□□□ -0.3
UBE2D4-205ENST00000443780 ESDP10768 282 aa13.17□□□□□ -0.3
UBE2D4-205ENST00000443780 TMEM242Q9NWH2 141 aa13.17□□□□□ -0.3
UBE2D4-205ENST00000443780 TRBV27A0A0K0K1C4 114 aa13.16□□□□□ -0.3
UBE2D4-205ENST00000443780 GAGE12HA6NDE8 117 aa13.16□□□□□ -0.3
UBE2D4-205ENST00000443780 SMKR1H3BMG3 65 aa13.16□□□□□ -0.3
UBE2D4-205ENST00000443780 ZNF25P17030 456 aaPredicted RBP13.16□□□□□ -0.3
UBE2D4-205ENST00000443780 CNBPP62633 177 aaKnown RBP13.15□□□□□ -0.3
UBE2D4-205ENST00000443780 NRACQ8N912 160 aa13.14□□□□□ -0.31
UBE2D4-205ENST00000443780 CHCHD10Q8WYQ3 142 aaPredicted RBP13.14□□□□□ -0.31
UBE2D4-205ENST00000443780 BTF3L4Q96K17 158 aa13.14□□□□□ -0.31
UBE2D4-205ENST00000443780 PPP1R17O96001 155 aa13.13□□□□□ -0.31
UBE2D4-205ENST00000443780 FAM104BQ5XKR9 115 aa13.13□□□□□ -0.31
UBE2D4-205ENST00000443780 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
UBE2D4-205ENST00000443780 TMEM101Q96IK0 257 aa13.13□□□□□ -0.31
UBE2D4-205ENST00000443780 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
UBE2D4-205ENST00000443780 VCYO14598 125 aa13.12□□□□□ -0.31
UBE2D4-205ENST00000443780 SLPIP03973 132 aa13.12□□□□□ -0.31
UBE2D4-205ENST00000443780 CAMPP49913 170 aa13.12□□□□□ -0.31
UBE2D4-205ENST00000443780 MRPL51Q4U2R6 128 aaKnown RBP13.12□□□□□ -0.31
UBE2D4-205ENST00000443780 C15orf56Q8N910 161 aa13.12□□□□□ -0.31
UBE2D4-205ENST00000443780 OR5A1Q8NGJ0 315 aa13.12□□□□□ -0.31
UBE2D4-205ENST00000443780 MYCBP2O75592 4640 aa13.11□□□□□ -0.31
UBE2D4-205ENST00000443780 A0A1B0GW15 77 aa13.11□□□□□ -0.31
UBE2D4-205ENST00000443780 SUMO2P61956 95 aaKnown RBP13.11□□□□□ -0.31
UBE2D4-205ENST00000443780 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms