RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 UBE2L6O14933 153 aa8.82□□□□□ -1
HMGN1-208ENST00000443046 MGPP08493 103 aa8.82□□□□□ -1
HMGN1-208ENST00000443046 IGLC6P0CF74 106 aa8.82□□□□□ -1
HMGN1-208ENST00000443046 NIT2Q9NQR4 276 aa8.82□□□□□ -1
HMGN1-208ENST00000443046 FAM231BA6NCW3 169 aa8.81□□□□□ -1
HMGN1-208ENST00000443046 PAGE4O60829 102 aa8.81□□□□□ -1
HMGN1-208ENST00000443046 FOXI1Q12951 378 aa8.81□□□□□ -1
HMGN1-208ENST00000443046 PKIGQ9Y2B9 76 aa8.81□□□□□ -1
HMGN1-208ENST00000443046 ALG5Q9Y673 324 aa8.81□□□□□ -1
HMGN1-208ENST00000443046 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
HMGN1-208ENST00000443046 AMTP48728 403 aa8.8□□□□□ -1
HMGN1-208ENST00000443046 COTL1Q14019 142 aa8.8□□□□□ -1
HMGN1-208ENST00000443046 IGKV3OR2-268A0A0C4DH90 116 aa8.79□□□□□ -1
HMGN1-208ENST00000443046 DEFA1P59665 94 aa8.79□□□□□ -1
HMGN1-208ENST00000443046 ZNF664Q8N3J9 261 aa8.79□□□□□ -1
HMGN1-208ENST00000443046 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
HMGN1-208ENST00000443046 CACNG7P62955 275 aa8.78□□□□□ -1
HMGN1-208ENST00000443046 FER1L6-AS1Q8NA97 138 aa8.78□□□□□ -1
HMGN1-208ENST00000443046 NTF3P20783 257 aa8.77□□□□□ -1.01
HMGN1-208ENST00000443046 PTTG1IPP53801 180 aa8.77□□□□□ -1.01
HMGN1-208ENST00000443046 TMUB2Q71RG4 321 aa8.77□□□□□ -1.01
HMGN1-208ENST00000443046 LINC00526Q96FQ7 95 aa8.77□□□□□ -1.01
HMGN1-208ENST00000443046 CARD19Q96LW7 228 aa8.77□□□□□ -1.01
HMGN1-208ENST00000443046 CYTL1Q9NRR1 136 aa8.77□□□□□ -1.01
HMGN1-208ENST00000443046 IGHV1-58A0A0C4DH39 117 aa8.76□□□□□ -1.01
HMGN1-208ENST00000443046 H7C423 109 aa8.76□□□□□ -1.01
HMGN1-208ENST00000443046 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-208ENST00000443046 MBD3L1Q8WWY6 194 aa8.76□□□□□ -1.01
HMGN1-208ENST00000443046 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
HMGN1-208ENST00000443046 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
HMGN1-208ENST00000443046 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
HMGN1-208ENST00000443046 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
HMGN1-208ENST00000443046 GIPP09681 153 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-208ENST00000443046 RPS20P60866 119 aaKnown RBP8.75□□□□□ -1.01
HMGN1-208ENST00000443046 Q6ZNX1 250 aa8.75□□□□□ -1.01
HMGN1-208ENST00000443046 FXYD6-FXYD2A0A087WZ82 144 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 F2Z2F3 143 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 TRGC1P0CF51 173 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 FGF6P10767 208 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 RPL35P42766 123 aaKnown RBP8.74□□□□□ -1.01
HMGN1-208ENST00000443046 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 AMMECR1LQ6DCA0 310 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 OR5A1Q8NGJ0 315 aa8.74□□□□□ -1.01
HMGN1-208ENST00000443046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-208ENST00000443046 LINC00959A0A1B0GUT2 108 aa8.73□□□□□ -1.01
HMGN1-208ENST00000443046 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-208ENST00000443046 PFDN1O60925 122 aa8.73□□□□□ -1.01
HMGN1-208ENST00000443046 NCR2O95944 276 aa8.73□□□□□ -1.01
HMGN1-208ENST00000443046 XCL1P47992 114 aa8.73□□□□□ -1.01
HMGN1-208ENST00000443046 RNASEKQ6P5S7 137 aaKnown RBP8.73□□□□□ -1.01
HMGN1-208ENST00000443046 GATD1Q8NB37 220 aa8.73□□□□□ -1.01
HMGN1-208ENST00000443046 OR2D3Q8NGH3 330 aa8.73□□□□□ -1.01
HMGN1-208ENST00000443046 SFT2D1Q8WV19 159 aa8.73□□□□□ -1.01
HMGN1-208ENST00000443046 A0A0U1RQV1 116 aa8.72□□□□□ -1.01
HMGN1-208ENST00000443046 LOC107984640A0A0U1RRK4 108 aa8.72□□□□□ -1.01
HMGN1-208ENST00000443046 G3V3Q6 166 aa8.72□□□□□ -1.01
HMGN1-208ENST00000443046 CCL25O15444 150 aa8.72□□□□□ -1.01
HMGN1-208ENST00000443046 LYZL1Q6UWQ5 148 aa8.72□□□□□ -1.01
HMGN1-208ENST00000443046 TRAV26-2A0A0B4J265 109 aa8.71□□□□□ -1.02
HMGN1-208ENST00000443046 MT-ND6P03923 174 aa8.71□□□□□ -1.02
HMGN1-208ENST00000443046 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-208ENST00000443046 C9orf62Q8N4C0 152 aa8.71□□□□□ -1.02
HMGN1-208ENST00000443046 C11orf52Q96A22 123 aa8.71□□□□□ -1.02
HMGN1-208ENST00000443046 CNFNQ9BYD5 112 aa8.71□□□□□ -1.02
HMGN1-208ENST00000443046 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
HMGN1-208ENST00000443046 CAMPP49913 170 aa8.7□□□□□ -1.02
HMGN1-208ENST00000443046 GAGE2BQ13066 116 aa8.7□□□□□ -1.02
HMGN1-208ENST00000443046 C1orf137Q5JT78 98 aa8.7□□□□□ -1.02
HMGN1-208ENST00000443046 A0A1B0GV50 99 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 APCSP02743 223 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 CTRLP40313 264 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-208ENST00000443046 CENPWQ5EE01 88 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 KCNRGQ8N5I3 272 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 NUP35Q8NFH5 326 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 DIRC1Q969H9 104 aa8.69□□□□□ -1.02
HMGN1-208ENST00000443046 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
HMGN1-208ENST00000443046 XKRY2A2RUG3 117 aa8.68□□□□□ -1.02
HMGN1-208ENST00000443046 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
HMGN1-208ENST00000443046 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
HMGN1-208ENST00000443046 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
HMGN1-208ENST00000443046 FAM213BQ8TBF2 198 aa8.68□□□□□ -1.02
HMGN1-208ENST00000443046 ISOC2Q96AB3 205 aa8.68□□□□□ -1.02
HMGN1-208ENST00000443046 RPL39LQ96EH5 51 aaKnown RBP8.68□□□□□ -1.02
HMGN1-208ENST00000443046 SMIM12Q96EX1 92 aa8.68□□□□□ -1.02
HMGN1-208ENST00000443046 IGLV1-50A0A075B6I6 118 aa8.67□□□□□ -1.02
HMGN1-208ENST00000443046 UMAD1C9J7I0 102 aa8.67□□□□□ -1.02
HMGN1-208ENST00000443046 H0Y9J4 135 aa8.67□□□□□ -1.02
HMGN1-208ENST00000443046 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-208ENST00000443046 IFNA1P01562 189 aa8.67□□□□□ -1.02
HMGN1-208ENST00000443046 BCL2P10415 239 aa8.67□□□□□ -1.02
HMGN1-208ENST00000443046 ESDP10768 282 aa8.67□□□□□ -1.02
HMGN1-208ENST00000443046 MEF2BQ02080 365 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-208ENST00000443046 SDHAF1A6NFY7 115 aa8.66□□□□□ -1.02
HMGN1-208ENST00000443046 ARPC5O15511 151 aa8.66□□□□□ -1.02
HMGN1-208ENST00000443046 APOMO95445 188 aa8.66□□□□□ -1.02
HMGN1-208ENST00000443046 SS18Q15532 418 aa8.66□□□□□ -1.02
HMGN1-208ENST00000443046 TMEM101Q96IK0 257 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms