RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 A0A1B0GUT8 65 aa4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 A0A1B0GUV1 79 aa4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 LINC01546A6NGU7 62 aa4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 NABP2Q9BQ15 211 aa4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 HEATR1Q9H583 2144 aaKnown RBP4.17□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 LEPROTO15243 131 aa4.16□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ZNF497Q6ZNH5 498 aa4.16□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 FGF23Q9GZV9 251 aaPredicted RBP4.16□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 FRYQ5TBA9 3013 aa4.16□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 TEX49A0A1B0GTD5 131 aa4.16□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 UPK3BQ9BT76 320 aa4.16□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 OTOGLQ3ZCN5 2332 aa4.16□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 SVILO95425 2214 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 FSHBP01225 129 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CD28P10747 220 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 PLNP26678 52 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CKS2P33552 79 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 SFTA2Q6UW10 78 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 Q8IYB0 196 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 ORMDL3Q8N138 153 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 FAM216BQ8N7L0 139 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 DHRS4-AS1Q9P1J3 65 aa4.15□□□□□ -1.74
ALMS1-IT1-201ENST00000441587 CACNA1DQ01668 2161 aa4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 A0A087X002 238 aa4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CRIP2P52943 208 aaPredicted RBP4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 NANOS2P60321 138 aaKnown RBP4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 SERP2Q8N6R1 65 aa4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 Q8N8P6 123 aa4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 PRO1854Q9UHT4 67 aa4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CACNA1GO43497 2377 aa4.15□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 RAI1Q7Z5J4 1906 aaPredicted RBP4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 INTS1Q8N201 2190 aaKnown RBP4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IGHV3-74A0A0B4J1X5 117 aa4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 D6R8Y8 96 aa4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 SLC25A16P16260 332 aa4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 ATP11AUNQ6ZP68 121 aa4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 C18orf65Q6ZTR6 163 aa4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 FAM104AQ969W3 186 aa4.14□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 TRAV40A0A0B4J280 105 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IGLV1-44P01699 117 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 EGFEM1PQ0D2K5 195 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 FAM104BQ5XKR9 115 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 C2orf82Q6UX34 121 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IGFL3Q6UXB1 125 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 LINC00322Q6ZN03 302 aaPredicted RBP4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CNEP1R1Q8N9A8 125 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 DEFB124Q8NES8 71 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 FDCSPQ8NFU4 85 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CLEC2BQ92478 149 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 MAP1BP46821 2468 aaKnown RBP4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 DIDO1Q9BTC0 2240 aaKnown RBP4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 PRR14LQ5THK1 2151 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IGHV3OR16-10A0A075B7F0 116 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IQCF6A8MYZ5 107 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 ARMS2P0C7Q2 107 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CFC1BP0CG36 223 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CFC1P0CG37 223 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 EIF4EBP1Q13541 118 aaPredicted RBP4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 PRR4Q16378 134 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 SPINK9Q5DT21 86 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 C2orf66Q6UXQ4 117 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 SDIM1Q6ZPB5 146 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 FAM167A-AS1Q96KT0 104 aa4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 RP1L1Q8IWN7 2480 aaPredicted RBP4.13□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 C19orf84I3L1E1 186 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 FXYD7P58549 80 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 KLF14Q8TD94 323 aaPredicted RBP4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 MRPL35Q9NZE8 188 aaKnown RBP4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 LOC400499M0QZD8 3231 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 RIF1Q5UIP0 2472 aaKnown RBP4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 DSPP15924 2871 aaKnown RBP4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 USF3Q68DE3 2245 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 TRAV12-1A0A0B4J245 112 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 TRBV6-1A0A0K0K1D8 114 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 SOCS3O14543 225 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IGKV3-15P01624 115 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IGHV3-33P01772 117 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 RPL27AP46776 148 aaKnown RBP4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 MRPL51Q4U2R6 128 aaKnown RBP4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 PATE2Q6UY27 113 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 SCGB3A1Q96QR1 104 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 ZNF318Q5VUA4 2279 aa4.12□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 A0A0B4J2C4 111 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 IGHV3-64DA0A0J9YX35 117 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 TMEM30CPA0ZSE6 113 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 ZNF815PA8K554 130 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 C17orf98A8MV24 154 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CCKP06307 115 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 SAA1P0DJI8 122 aaPredicted RBP4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 ZNF22P17026 224 aaPredicted RBP4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 DEFB109BQ30KR1 87 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 C9orf106Q8NAJ2 232 aa4.11□□□□□ -1.75
ALMS1-IT1-201ENST00000441587 CEP250Q9BV73 2442 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms