RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
HDLBP-218ENST00000441124 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
HDLBP-218ENST00000441124 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
HDLBP-218ENST00000441124 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
HDLBP-218ENST00000441124 FOXI1Q12951 378 aa11.22□□□□□ -0.61
HDLBP-218ENST00000441124 RNASEKQ6P5S7 137 aaKnown RBP11.22□□□□□ -0.61
HDLBP-218ENST00000441124 PGLYRP4Q96LB8 373 aa11.22□□□□□ -0.61
HDLBP-218ENST00000441124 XCL1P47992 114 aa11.21□□□□□ -0.61
HDLBP-218ENST00000441124 SYCNQ0VAF6 134 aa11.21□□□□□ -0.61
HDLBP-218ENST00000441124 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
HDLBP-218ENST00000441124 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
HDLBP-218ENST00000441124 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
HDLBP-218ENST00000441124 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
HDLBP-218ENST00000441124 PHF5AQ7RTV0 110 aaKnown RBP11.18□□□□□ -0.62
HDLBP-218ENST00000441124 NIT2Q9NQR4 276 aa11.18□□□□□ -0.62
HDLBP-218ENST00000441124 IGLV1-50A0A075B6I6 118 aa11.17□□□□□ -0.62
HDLBP-218ENST00000441124 IGLV7-43P04211 117 aa11.17□□□□□ -0.62
HDLBP-218ENST00000441124 UBE2D1P51668 147 aa11.17□□□□□ -0.62
HDLBP-218ENST00000441124 EIF5AP63241 154 aaKnown RBP11.17□□□□□ -0.62
HDLBP-218ENST00000441124 C9orf116Q5BN46 136 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-218ENST00000441124 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-218ENST00000441124 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-218ENST00000441124 CCL25O15444 150 aa11.16□□□□□ -0.62
HDLBP-218ENST00000441124 BCL2P10415 239 aa11.16□□□□□ -0.62
HDLBP-218ENST00000441124 BAGE2Q86Y30 109 aa11.16□□□□□ -0.62
HDLBP-218ENST00000441124 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.62
HDLBP-218ENST00000441124 H0Y9J4 135 aa11.15□□□□□ -0.62
HDLBP-218ENST00000441124 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
HDLBP-218ENST00000441124 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
HDLBP-218ENST00000441124 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
HDLBP-218ENST00000441124 CAMPP49913 170 aa11.14□□□□□ -0.63
HDLBP-218ENST00000441124 AKR1C8PQ5T2L2 129 aa11.14□□□□□ -0.63
HDLBP-218ENST00000441124 A0A087WZ39 114 aa11.13□□□□□ -0.63
HDLBP-218ENST00000441124 DEFA1P59665 94 aa11.13□□□□□ -0.63
HDLBP-218ENST00000441124 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
HDLBP-218ENST00000441124 RPL7L1Q6DKI1 246 aaKnown RBP11.13□□□□□ -0.63
HDLBP-218ENST00000441124 ISOC2Q96AB3 205 aa11.13□□□□□ -0.63
HDLBP-218ENST00000441124 TSPAN13O95857 204 aa11.12□□□□□ -0.63
HDLBP-218ENST00000441124 FGF6P10767 208 aa11.12□□□□□ -0.63
HDLBP-218ENST00000441124 FHITP49789 147 aa11.12□□□□□ -0.63
HDLBP-218ENST00000441124 BORCS7-ASMTA0A0B4J1R7 106 aa11.11□□□□□ -0.63
HDLBP-218ENST00000441124 SCO2A0A1W2PP80 73 aa11.11□□□□□ -0.63
HDLBP-218ENST00000441124 PAGE4O60829 102 aa11.11□□□□□ -0.63
HDLBP-218ENST00000441124 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
HDLBP-218ENST00000441124 Q6ZNX1 250 aa11.11□□□□□ -0.63
HDLBP-218ENST00000441124 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
HDLBP-218ENST00000441124 MLST8Q9BVC4 326 aa11.11□□□□□ -0.63
HDLBP-218ENST00000441124 MED28Q9H204 178 aa11.11□□□□□ -0.63
HDLBP-218ENST00000441124 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
HDLBP-218ENST00000441124 LINC00959A0A1B0GUT2 108 aa11.1□□□□□ -0.63
HDLBP-218ENST00000441124 NTF3P20783 257 aa11.1□□□□□ -0.63
HDLBP-218ENST00000441124 MARVELD1Q9BSK0 173 aa11.1□□□□□ -0.63
HDLBP-218ENST00000441124 APCSP02743 223 aa11.09□□□□□ -0.63
HDLBP-218ENST00000441124 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
HDLBP-218ENST00000441124 TRGC1P0CF51 173 aa11.09□□□□□ -0.63
HDLBP-218ENST00000441124 BTF3L4Q96K17 158 aa11.09□□□□□ -0.63
HDLBP-218ENST00000441124 APOMO95445 188 aa11.08□□□□□ -0.64
HDLBP-218ENST00000441124 IGLC6P0CF74 106 aa11.08□□□□□ -0.64
HDLBP-218ENST00000441124 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.64
HDLBP-218ENST00000441124 SS18Q15532 418 aa11.08□□□□□ -0.64
HDLBP-218ENST00000441124 OR2D3Q8NGH3 330 aa11.08□□□□□ -0.64
HDLBP-218ENST00000441124 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
HDLBP-218ENST00000441124 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
HDLBP-218ENST00000441124 UPK1BO75841 260 aa11.07□□□□□ -0.64
HDLBP-218ENST00000441124 MALP21145 153 aa11.07□□□□□ -0.64
HDLBP-218ENST00000441124 NUP35Q8NFH5 326 aa11.07□□□□□ -0.64
HDLBP-218ENST00000441124 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-218ENST00000441124 H7C423 109 aa11.06□□□□□ -0.64
HDLBP-218ENST00000441124 PFDN1O60925 122 aa11.06□□□□□ -0.64
HDLBP-218ENST00000441124 MEF2BQ02080 365 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-218ENST00000441124 OPRPNQ99935 248 aaPredicted RBP11.06□□□□□ -0.64
HDLBP-218ENST00000441124 A0A1B0GV50 99 aa11.05□□□□□ -0.64
HDLBP-218ENST00000441124 CD164L2Q6UWJ8 174 aa11.05□□□□□ -0.64
HDLBP-218ENST00000441124 NCR2O95944 276 aa11.04□□□□□ -0.64
HDLBP-218ENST00000441124 ZNF25P17030 456 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-218ENST00000441124 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
HDLBP-218ENST00000441124 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
HDLBP-218ENST00000441124 GATD1Q8NB37 220 aa11.04□□□□□ -0.64
HDLBP-218ENST00000441124 S100ZQ8WXG8 99 aa11.04□□□□□ -0.64
HDLBP-218ENST00000441124 IFITM3Q01628 133 aa11.03□□□□□ -0.64
HDLBP-218ENST00000441124 EIF5AL1Q6IS14 154 aaKnown RBP11.03□□□□□ -0.64
HDLBP-218ENST00000441124 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
HDLBP-218ENST00000441124 TMUB2Q71RG4 321 aa11.03□□□□□ -0.64
HDLBP-218ENST00000441124 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
HDLBP-218ENST00000441124 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
HDLBP-218ENST00000441124 F2Z2F3 143 aa11.01□□□□□ -0.65
HDLBP-218ENST00000441124 BCL2L11O43521 198 aa11.01□□□□□ -0.65
HDLBP-218ENST00000441124 Q5BKY6 102 aa11.01□□□□□ -0.65
HDLBP-218ENST00000441124 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
HDLBP-218ENST00000441124 CRCT1Q9UGL9 99 aa11.01□□□□□ -0.65
HDLBP-218ENST00000441124 FAM168BA1KXE4 195 aa11□□□□□ -0.65
HDLBP-218ENST00000441124 COX7A2LO14548 114 aa11□□□□□ -0.65
HDLBP-218ENST00000441124 RPL35P42766 123 aaKnown RBP11□□□□□ -0.65
HDLBP-218ENST00000441124 TWIST1Q15672 202 aa11□□□□□ -0.65
HDLBP-218ENST00000441124 FXYD6-FXYD2A0A087WZ82 144 aa10.99□□□□□ -0.65
HDLBP-218ENST00000441124 XKRY2A2RUG3 117 aa10.99□□□□□ -0.65
HDLBP-218ENST00000441124 IFNA1P01562 189 aa10.99□□□□□ -0.65
HDLBP-218ENST00000441124 PMCHP20382 165 aa10.99□□□□□ -0.65
HDLBP-218ENST00000441124 SFT2D1Q8WV19 159 aa10.99□□□□□ -0.65
HDLBP-218ENST00000441124 SDHAF1A6NFY7 115 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms