RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 TSHBP01222 138 aa10.78□□□□□ -0.68
CPSF7-205ENST00000439958 ERASQ7Z444 233 aa10.78□□□□□ -0.68
CPSF7-205ENST00000439958 IGKV3OR2-268A0A0C4DH90 116 aa10.78□□□□□ -0.68
CPSF7-205ENST00000439958 A0A0J9YY99 117 aa10.78□□□□□ -0.68
CPSF7-205ENST00000439958 PRSS29PA6NIE9 313 aa10.78□□□□□ -0.68
CPSF7-205ENST00000439958 K7EQD1 137 aa10.77□□□□□ -0.69
CPSF7-205ENST00000439958 HINT1P49773 126 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-205ENST00000439958 MRAPQ8TCY5 172 aa10.77□□□□□ -0.69
CPSF7-205ENST00000439958 BAALCQ8WXS3 180 aa10.77□□□□□ -0.69
CPSF7-205ENST00000439958 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
CPSF7-205ENST00000439958 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.69
CPSF7-205ENST00000439958 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.69
CPSF7-205ENST00000439958 IGHV3-64A0A075B6Q5 118 aa10.76□□□□□ -0.69
CPSF7-205ENST00000439958 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
CPSF7-205ENST00000439958 KRTAP10-11P60412 298 aa10.76□□□□□ -0.69
CPSF7-205ENST00000439958 TRBV6-5A0A0K0K1A5 114 aa10.76□□□□□ -0.69
CPSF7-205ENST00000439958 PLAC8L1A1L4L8 177 aa10.76□□□□□ -0.69
CPSF7-205ENST00000439958 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
CPSF7-205ENST00000439958 DAZ2Q13117 558 aaKnown RBP10.76□□□□□ -0.69
CPSF7-205ENST00000439958 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
CPSF7-205ENST00000439958 TRBV7-3A0A075B6L6 115 aa10.75□□□□□ -0.69
CPSF7-205ENST00000439958 IGHV4-28A0A0C4DH34 117 aa10.75□□□□□ -0.69
CPSF7-205ENST00000439958 G0S2P27469 103 aa10.75□□□□□ -0.69
CPSF7-205ENST00000439958 EREGO14944 169 aa10.75□□□□□ -0.69
CPSF7-205ENST00000439958 VCX2Q9H322 139 aa10.75□□□□□ -0.69
CPSF7-205ENST00000439958 A0A087WX48 190 aa10.75□□□□□ -0.69
CPSF7-205ENST00000439958 PCP2Q8IVA1 136 aa10.75□□□□□ -0.69
CPSF7-205ENST00000439958 C20orf203Q8NBC4 194 aa10.74□□□□□ -0.69
CPSF7-205ENST00000439958 X6R8D5 127 aa10.74□□□□□ -0.69
CPSF7-205ENST00000439958 DAD1P61803 113 aa10.74□□□□□ -0.69
CPSF7-205ENST00000439958 UFSP1Q6NVU6 142 aa10.73□□□□□ -0.69
CPSF7-205ENST00000439958 F8VRH5 84 aa10.73□□□□□ -0.69
CPSF7-205ENST00000439958 K7EMI3 77 aa10.73□□□□□ -0.69
CPSF7-205ENST00000439958 LINC01546A6NGU7 62 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 TENM3Q9P273 2699 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 F5H768 121 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 UBE2L6O14933 153 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 HHLA3Q9XRX5 114 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 M0R143 59 aa10.72□□□□□ -0.69
CPSF7-205ENST00000439958 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.69
CPSF7-205ENST00000439958 PMVKQ15126 192 aa10.71□□□□□ -0.69
CPSF7-205ENST00000439958 RHOHQ15669 191 aa10.71□□□□□ -0.69
CPSF7-205ENST00000439958 GYPEP15421 78 aa10.71□□□□□ -0.69
CPSF7-205ENST00000439958 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
CPSF7-205ENST00000439958 IL17DQ8TAD2 202 aa10.71□□□□□ -0.7
CPSF7-205ENST00000439958 PLNP26678 52 aa10.7□□□□□ -0.7
CPSF7-205ENST00000439958 PIK3CD-AS1Q5SR53 167 aa10.7□□□□□ -0.7
CPSF7-205ENST00000439958 CHCHD5Q9BSY4 110 aa10.7□□□□□ -0.7
CPSF7-205ENST00000439958 IGIPA6NJ69 53 aa10.7□□□□□ -0.7
CPSF7-205ENST00000439958 KIR2DL5BQ8NHK3 375 aa10.7□□□□□ -0.7
CPSF7-205ENST00000439958 CELA1Q9UNI1 258 aa10.7□□□□□ -0.7
CPSF7-205ENST00000439958 TMEM262E9PQX1 116 aa10.7□□□□□ -0.7
CPSF7-205ENST00000439958 A0A0J9YXV3 536 aa10.69□□□□□ -0.7
CPSF7-205ENST00000439958 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
CPSF7-205ENST00000439958 GAGE6Q13070 117 aa10.69□□□□□ -0.7
CPSF7-205ENST00000439958 CHAC1Q9BUX1 264 aa10.69□□□□□ -0.7
CPSF7-205ENST00000439958 CST9LQ9H4G1 147 aa10.69□□□□□ -0.7
CPSF7-205ENST00000439958 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 RPL32P62910 135 aaKnown RBP10.68□□□□□ -0.7
CPSF7-205ENST00000439958 MPV17L2Q567V2 206 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 Q6ZUT4 128 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 PAX4O43316 350 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 FHL2Q14192 279 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 TMEM141Q96I45 108 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 DNAJC30Q96LL9 226 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 MDFIQ99750 246 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
CPSF7-205ENST00000439958 IGLV4-3A0A075B6K6 122 aa10.67□□□□□ -0.7
CPSF7-205ENST00000439958 LINC00694P0DN24 101 aa10.67□□□□□ -0.7
CPSF7-205ENST00000439958 COX8AP10176 69 aa10.67□□□□□ -0.7
CPSF7-205ENST00000439958 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
CPSF7-205ENST00000439958 TIMM17AQ99595 171 aa10.67□□□□□ -0.7
CPSF7-205ENST00000439958 SMIM9A6NGZ8 99 aa10.66□□□□□ -0.7
CPSF7-205ENST00000439958 PTH2Q96A98 100 aa10.66□□□□□ -0.7
CPSF7-205ENST00000439958 ZNF25P17030 456 aaPredicted RBP10.66□□□□□ -0.7
CPSF7-205ENST00000439958 CHCHD7Q9BUK0 85 aa10.66□□□□□ -0.7
CPSF7-205ENST00000439958 TRAV26-1A0A087WT03 109 aa10.66□□□□□ -0.7
CPSF7-205ENST00000439958 TRBV10-1A0A0K0K1A3 114 aa10.66□□□□□ -0.7
CPSF7-205ENST00000439958 SCGB1D4Q6XE38 83 aa10.66□□□□□ -0.7
CPSF7-205ENST00000439958 ZMAT4Q9H898 229 aa10.66□□□□□ -0.7
CPSF7-205ENST00000439958 A0A1B0GV90 55 aa10.65□□□□□ -0.7
CPSF7-205ENST00000439958 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.7
CPSF7-205ENST00000439958 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.7
CPSF7-205ENST00000439958 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.7
CPSF7-205ENST00000439958 GEMIN7Q9H840 131 aaKnown RBP10.65□□□□□ -0.7
CPSF7-205ENST00000439958 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.7
CPSF7-205ENST00000439958 FGF6P10767 208 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 UBE2D3P61077 147 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 UBE2D2P62837 147 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 PAPPA-AS1Q5QFB9 102 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 TRBV25-1A0A075B6N4 114 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 CLPSL2Q6UWE3 100 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 RNF183Q96D59 192 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 TMEM243Q9BU79 118 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 HERVK_113P61574 105 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 NTM-AS1Q6ZSK4 140 aa10.64□□□□□ -0.71
CPSF7-205ENST00000439958 LINC00469Q8N7U9 141 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms