RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 BLOC1S1P78537 153 aa10.53□□□□□ -0.72
SNRPD3-204ENST00000439775 COTL1Q14019 142 aa10.53□□□□□ -0.72
SNRPD3-204ENST00000439775 CLRN3Q8NCR9 226 aa10.53□□□□□ -0.72
SNRPD3-204ENST00000439775 LYPD6BQ8NI32 183 aa10.53□□□□□ -0.72
SNRPD3-204ENST00000439775 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
SNRPD3-204ENST00000439775 AMTP48728 403 aa10.52□□□□□ -0.73
SNRPD3-204ENST00000439775 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
SNRPD3-204ENST00000439775 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
SNRPD3-204ENST00000439775 C9orf163Q8N9P6 203 aa10.52□□□□□ -0.73
SNRPD3-204ENST00000439775 GATD1Q8NB37 220 aa10.52□□□□□ -0.73
SNRPD3-204ENST00000439775 GTSF1Q8WW33 167 aa10.52□□□□□ -0.73
SNRPD3-204ENST00000439775 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
SNRPD3-204ENST00000439775 UBE2L6O14933 153 aa10.51□□□□□ -0.73
SNRPD3-204ENST00000439775 FAM231DQ6ZW35 169 aa10.51□□□□□ -0.73
SNRPD3-204ENST00000439775 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
SNRPD3-204ENST00000439775 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
SNRPD3-204ENST00000439775 KRTAP29-1A8MX34 341 aaPredicted RBP10.5□□□□□ -0.73
SNRPD3-204ENST00000439775 J3QL48 77 aa10.5□□□□□ -0.73
SNRPD3-204ENST00000439775 CNBPP62633 177 aaKnown RBP10.5□□□□□ -0.73
SNRPD3-204ENST00000439775 SMIM15Q7Z3B0 74 aa10.5□□□□□ -0.73
SNRPD3-204ENST00000439775 CT83Q5H943 113 aa10.49□□□□□ -0.73
SNRPD3-204ENST00000439775 TEX261Q6UWH6 196 aa10.49□□□□□ -0.73
SNRPD3-204ENST00000439775 A8MWL6 223 aa10.48□□□□□ -0.73
SNRPD3-204ENST00000439775 GATCO43716 136 aaKnown RBP10.48□□□□□ -0.73
SNRPD3-204ENST00000439775 NDUFS6O75380 124 aaKnown RBP10.48□□□□□ -0.73
SNRPD3-204ENST00000439775 NCR2O95944 276 aa10.48□□□□□ -0.73
SNRPD3-204ENST00000439775 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
SNRPD3-204ENST00000439775 FOXA3P55318 350 aaPredicted RBP10.47□□□□□ -0.73
SNRPD3-204ENST00000439775 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
SNRPD3-204ENST00000439775 hDV102S1A0JD36 115 aa10.46□□□□□ -0.73
SNRPD3-204ENST00000439775 SDIM1Q6ZPB5 146 aa10.46□□□□□ -0.73
SNRPD3-204ENST00000439775 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.46□□□□□ -0.73
SNRPD3-204ENST00000439775 H7C423 109 aa10.45□□□□□ -0.74
SNRPD3-204ENST00000439775 CEBPGP53567 150 aa10.45□□□□□ -0.74
SNRPD3-204ENST00000439775 TRBV6-5A0A0K0K1A5 114 aa10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 APCSP02743 223 aa10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 CIRBPQ14011 172 aaKnown RBP10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 LINC01551Q86U37 167 aa10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 BORCS7Q96B45 105 aa10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 SMIM7Q9BQ49 75 aa10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 EIF5A2Q9GZV4 153 aaKnown RBP10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
SNRPD3-204ENST00000439775 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
SNRPD3-204ENST00000439775 PANO1I0J062 215 aa10.43□□□□□ -0.74
SNRPD3-204ENST00000439775 RPL37AP61513 92 aaKnown RBP10.43□□□□□ -0.74
SNRPD3-204ENST00000439775 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
SNRPD3-204ENST00000439775 TSKUQ8WUA8 353 aa10.43□□□□□ -0.74
SNRPD3-204ENST00000439775 FAM210AQ96ND0 272 aa10.43□□□□□ -0.74
SNRPD3-204ENST00000439775 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
SNRPD3-204ENST00000439775 FAM231BA6NCW3 169 aa10.42□□□□□ -0.74
SNRPD3-204ENST00000439775 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
SNRPD3-204ENST00000439775 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 A0A1B0GUT8 65 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 GAGE12HA6NDE8 117 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 HIGD1CA8MV81 97 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 I3L3M4 83 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 OXTP01178 125 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 SLPIP03973 132 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 FGF6P10767 208 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 ZNF25P17030 456 aaPredicted RBP10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 OSTCQ9NRP0 149 aa10.41□□□□□ -0.74
SNRPD3-204ENST00000439775 ZNF727A8MUV8 499 aa10.4□□□□□ -0.74
SNRPD3-204ENST00000439775 RNASEKQ6P5S7 137 aaKnown RBP10.4□□□□□ -0.74
SNRPD3-204ENST00000439775 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
SNRPD3-204ENST00000439775 PMCHP20382 165 aa10.39□□□□□ -0.75
SNRPD3-204ENST00000439775 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
SNRPD3-204ENST00000439775 RNF185Q96GF1 192 aa10.39□□□□□ -0.75
SNRPD3-204ENST00000439775 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
SNRPD3-204ENST00000439775 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
SNRPD3-204ENST00000439775 GAS8-AS1O95177 125 aa10.38□□□□□ -0.75
SNRPD3-204ENST00000439775 TSHBP01222 138 aa10.38□□□□□ -0.75
SNRPD3-204ENST00000439775 SRP19P09132 144 aaKnown RBP10.38□□□□□ -0.75
SNRPD3-204ENST00000439775 ESDP10768 282 aa10.38□□□□□ -0.75
SNRPD3-204ENST00000439775 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
SNRPD3-204ENST00000439775 MRAP2Q96G30 205 aa10.38□□□□□ -0.75
SNRPD3-204ENST00000439775 OR5A1Q8NGJ0 315 aa10.37□□□□□ -0.75
SNRPD3-204ENST00000439775 BTF3L4Q96K17 158 aa10.37□□□□□ -0.75
SNRPD3-204ENST00000439775 V9GYV3 84 aa10.37□□□□□ -0.75
SNRPD3-204ENST00000439775 GVQW2A0A096LPI5 108 aaPredicted RBP10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 TRBV27A0A0K0K1C4 114 aa10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 RAB4AP20338 218 aa10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 RPS10P46783 165 aaKnown RBP10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 POLR2KP53803 58 aaKnown RBP10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 FOXI1Q12951 378 aa10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 TMEM101Q96IK0 257 aa10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 TMEM242Q9NWH2 141 aa10.36□□□□□ -0.75
SNRPD3-204ENST00000439775 HNRNPA3P51991 378 aaKnown RBP10.35□□□□□ -0.75
SNRPD3-204ENST00000439775 HIGD2BQ4VC39 106 aa10.35□□□□□ -0.75
SNRPD3-204ENST00000439775 FAM74A3Q4VXF1 159 aa10.35□□□□□ -0.75
SNRPD3-204ENST00000439775 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
SNRPD3-204ENST00000439775 AMN1Q8IY45 258 aa10.35□□□□□ -0.75
SNRPD3-204ENST00000439775 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
SNRPD3-204ENST00000439775 A0A087WYN8 130 aa10.34□□□□□ -0.75
SNRPD3-204ENST00000439775 CHTF8P0CG12 524 aa10.34□□□□□ -0.75
SNRPD3-204ENST00000439775 RIGQ13278 110 aa10.34□□□□□ -0.75
SNRPD3-204ENST00000439775 NUP35Q8NFH5 326 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms