RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RPL32P62910 135 aaKnown RBP4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 GAGE1Q13065 139 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 GAGE4Q13068 117 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 GAGE5Q13069 117 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 RHOHQ15669 191 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 NEGR1Q7Z3B1 354 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 BAGE3Q86Y29 109 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 Q8N8P6 123 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 ZNRF2Q8NHG8 242 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 PRSS3P2Q8NHM4 247 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 PRADC1Q9BSG0 188 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 TMEM70Q9BUB7 260 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 SMIM2Q9BVW6 85 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 TNFRSF18Q9Y5U5 241 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 MEGF8Q7Z7M0 2845 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 DEFB131BA0A096LNP1 70 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 VCYO14598 125 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 TCAPO15273 167 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 SERF1AO75920 110 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 LINC00614P0C842 121 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 UBE2D3P61077 147 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 UBE2D2P62837 147 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 RPL36AP83881 106 aaKnown RBP4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 RNASEKQ6P5S7 137 aaKnown RBP4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 DEFB104AQ8WTQ1 72 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 PHLDA1Q8WV24 401 aaPredicted RBP4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 TMEM18Q96B42 140 aa4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 NXT2Q9NPJ8 142 aaKnown RBP4.89□□□□□ -1.63
LSM3P3-201ENST00000436601 TRAV10A0A0B4J240 114 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 IGHV3-38A0A0C4DH36 116 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 C5orf52A6NGY3 159 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 H3BNG1 76 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 I3L3M4 83 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 TSHBP01222 138 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 ESDP10768 282 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 PMCHP20382 165 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 SNRPEP62304 92 aaKnown RBP4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 PET117Q6UWS5 81 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 FA2HQ7L5A8 372 aa4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 CHCHD1Q96BP2 118 aaKnown RBP4.88□□□□□ -1.63
LSM3P3-201ENST00000436601 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
LSM3P3-201ENST00000436601 A0A096LPF7 62 aa4.87□□□□□ -1.63
LSM3P3-201ENST00000436601 S100A6P06703 90 aa4.87□□□□□ -1.63
LSM3P3-201ENST00000436601 PMCHL1Q16048 86 aa4.87□□□□□ -1.63
LSM3P3-201ENST00000436601 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
LSM3P3-201ENST00000436601 DAZ4Q86SG3 579 aaKnown RBP4.87□□□□□ -1.63
LSM3P3-201ENST00000436601 DAZ3Q9NR90 486 aaKnown RBP4.87□□□□□ -1.63
LSM3P3-201ENST00000436601 A0A096LNJ9 63 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 IGHV1-24A0A0C4DH33 117 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 IFITM10A6NMD0 228 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 K7EMI3 77 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 HSBP1O75506 76 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 LAGE3Q14657 143 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 MRPL23Q16540 153 aaKnown RBP4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 PDZD11Q5EBL8 140 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 HIST3H2BBQ8N257 126 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 FAM19A2Q8N3H0 131 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 ATP6V0E2Q8NHE4 81 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 KIR2DL4Q99706 377 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 CHCHD7Q9BUK0 85 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 ICOSQ9Y6W8 199 aa4.86□□□□□ -1.63
LSM3P3-201ENST00000436601 VPREB1P12018 145 aa4.85□□□□□ -1.63
LSM3P3-201ENST00000436601 FCER1GP30273 86 aa4.85□□□□□ -1.63
LSM3P3-201ENST00000436601 COTL1Q14019 142 aa4.85□□□□□ -1.63
LSM3P3-201ENST00000436601 ORMDL2Q53FV1 153 aa4.85□□□□□ -1.63
LSM3P3-201ENST00000436601 GTSF1LQ9H1H1 148 aa4.85□□□□□ -1.63
LSM3P3-201ENST00000436601 TRBV6-8A0A0A6YYG3 113 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 IGLL5B9A064 214 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 NUDT3O95989 172 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 AMTP48728 403 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 CEMP1Q6PRD7 247 aaPredicted RBP4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 LYPD5Q6UWN5 251 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 SH2D6Q7Z4S9 175 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 C20orf203Q8NBC4 194 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 HIST1H2BLQ99880 126 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 TENM3Q9P273 2699 aa4.84□□□□□ -1.63
LSM3P3-201ENST00000436601 HBDP02042 147 aa4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 RPL39P62891 51 aaKnown RBP4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 ESRGQ1W209 222 aa4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 C2orf66Q6UXQ4 117 aa4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 LINC00173Q6ZV60 143 aa4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 TOMM6Q96B49 74 aa4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 PACRGQ96M98 296 aaPredicted RBP4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 FBN3Q75N90 2809 aa4.83□□□□□ -1.64
LSM3P3-201ENST00000436601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 IGKV2-29A2NJV5 120 aaPredicted RBP4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 IGIPA6NJ69 53 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 FABP4P15090 132 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 S100A2P29034 98 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 TMEM97Q5BJF2 176 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 C15orf53Q8NAA6 179 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 FAM104AQ969W3 186 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 TMEM243Q9BU79 118 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 APLNQ9ULZ1 77 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 CYSLTR1Q9Y271 337 aa4.82□□□□□ -1.64
LSM3P3-201ENST00000436601 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
LSM3P3-201ENST00000436601 LOC105371267A0A1B0GV96 52 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms