RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 TRAV4A0A0B4J268 109 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 LYRM9A8MSI8 78 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 M0R143 59 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 TCTAP57738 103 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 CFAP126Q5VTH2 177 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 Q6ZTI0 123 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 IFI27L1Q96BM0 104 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
HMGCL-204ENST00000436439 A0A087WWL8 130 aa7.71□□□□□ -1.17
HMGCL-204ENST00000436439 TRAV26-2A0A0B4J265 109 aa7.71□□□□□ -1.17
HMGCL-204ENST00000436439 LAGE3Q14657 143 aa7.71□□□□□ -1.17
HMGCL-204ENST00000436439 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 TRAV10A0A0B4J240 114 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 TEX48A0A1B0GUV7 120 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 ATP5LO75964 103 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 MGPP08493 103 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 SUMO2P61956 95 aaKnown RBP7.71□□□□□ -1.18
HMGCL-204ENST00000436439 RPL32P62910 135 aaKnown RBP7.71□□□□□ -1.18
HMGCL-204ENST00000436439 C12orf74Q32Q52 190 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 MAJINQ3KP22 176 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 FAM74A4Q5TZK3 123 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 DKK2Q9UBU2 259 aa7.71□□□□□ -1.18
HMGCL-204ENST00000436439 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
HMGCL-204ENST00000436439 H0Y8G0 127 aa7.7□□□□□ -1.18
HMGCL-204ENST00000436439 HNRNPA3P51991 378 aaKnown RBP7.7□□□□□ -1.18
HMGCL-204ENST00000436439 ORMDL2Q53FV1 153 aa7.7□□□□□ -1.18
HMGCL-204ENST00000436439 SUMO4Q6EEV6 95 aa7.7□□□□□ -1.18
HMGCL-204ENST00000436439 Q6ZN92 141 aa7.7□□□□□ -1.18
HMGCL-204ENST00000436439 OR4C5Q8NGB2 326 aa7.7□□□□□ -1.18
HMGCL-204ENST00000436439 SNHG12Q9BXW3 62 aa7.7□□□□□ -1.18
HMGCL-204ENST00000436439 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
HMGCL-204ENST00000436439 DNAH2Q9P225 4427 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 TRGV2A0A075B6R0 118 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 GAGE12BA1L429 117 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 H7C1H1 209 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 M0QY20 66 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 EREGO14944 169 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 GAGE7O76087 117 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 IGHV3-53P01767 116 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 GAGE12FP0CL80 117 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 GAGE12GP0CL81 117 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 GAGE12IP0CL82 117 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 ZNF56Q15929 161 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 FAM222AQ5U5X8 452 aa7.69□□□□□ -1.18
HMGCL-204ENST00000436439 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 DNAH17Q9UFH2 4485 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 DEFB131BA0A096LNP1 70 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 hDV102S1A0JD36 115 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 LINC01549A6NIU2 74 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 F5H697 171 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 SPART-AS1P0CW21 52 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 G0S2P27469 103 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 EMP1P54849 157 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 ZNF479Q96JC4 524 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 PMCHL2Q9BQD1 86 aa7.68□□□□□ -1.18
HMGCL-204ENST00000436439 TCAPO15273 167 aa7.67□□□□□ -1.18
HMGCL-204ENST00000436439 NUDT3O95989 172 aa7.67□□□□□ -1.18
HMGCL-204ENST00000436439 SLC25A34Q6PIV7 304 aa7.67□□□□□ -1.18
HMGCL-204ENST00000436439 RPL39LQ96EH5 51 aaKnown RBP7.67□□□□□ -1.18
HMGCL-204ENST00000436439 A0A1B0GVY2 172 aa7.66□□□□□ -1.18
HMGCL-204ENST00000436439 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
HMGCL-204ENST00000436439 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
HMGCL-204ENST00000436439 IGHV3-73A0A0B4J1V6 119 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 TRBV10-1A0A0K0K1A3 114 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 PRSS1P07477 247 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 DEFB130BP0DP73 79 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 DEFB130AP0DP74 79 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 DAD1P61803 113 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 FHL2Q14192 279 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 ODF1Q14990 250 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 Q6ZSN1 163 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 TOMM6Q96B49 74 aa7.65□□□□□ -1.18
HMGCL-204ENST00000436439 TRBV27A0A0K0K1C4 114 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.64□□□□□ -1.19
HMGCL-204ENST00000436439 K7EQD1 137 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 M0R2N4 97 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 VCYO14598 125 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 RTL8CO15255 209 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 COX8AP10176 69 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 POLR2KP53803 58 aaKnown RBP7.64□□□□□ -1.19
HMGCL-204ENST00000436439 PKHD1P08F94 4074 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 PKD1P98161 4303 aa7.64□□□□□ -1.19
HMGCL-204ENST00000436439 TRAV12-1A0A0B4J245 112 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 TRGV4A0A0C4DH28 118 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 DPM2O94777 84 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 ATP5G1P05496 136 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 P0DMU3 169 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 FAM231AP0DMU4 169 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 FAM231CP0DMU5 169 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 LINC00336Q6ZUF6 198 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 SLC25A29Q8N8R3 303 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 NEXN-AS1Q8NBZ9 246 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 KIR2DL4Q99706 377 aa7.63□□□□□ -1.19
HMGCL-204ENST00000436439 DYNC1H1Q14204 4646 aaKnown RBP7.62□□□□□ -1.19
HMGCL-204ENST00000436439 A0A087WX48 190 aa7.62□□□□□ -1.19
HMGCL-204ENST00000436439 A0A1B0GV90 55 aa7.62□□□□□ -1.19
HMGCL-204ENST00000436439 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
HMGCL-204ENST00000436439 IGKCP01834 107 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms