RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 MAP1LC3B2A6NCE7 125 aa7.32□□□□□ -1.24
CHRNA1-207ENST00000435083 SNAI2O43623 268 aa7.32□□□□□ -1.24
CHRNA1-207ENST00000435083 C20orf203Q8NBC4 194 aa7.32□□□□□ -1.24
CHRNA1-207ENST00000435083 GTSF1Q8WW33 167 aa7.32□□□□□ -1.24
CHRNA1-207ENST00000435083 MAP1LC3BQ9GZQ8 125 aa7.32□□□□□ -1.24
CHRNA1-207ENST00000435083 CXCL1P09341 107 aa7.31□□□□□ -1.24
CHRNA1-207ENST00000435083 PEA15Q15121 130 aa7.31□□□□□ -1.24
CHRNA1-207ENST00000435083 TCEAL7Q9BRU2 100 aa7.31□□□□□ -1.24
CHRNA1-207ENST00000435083 SSBP4Q9BWG4 385 aaPredicted RBP7.31□□□□□ -1.24
CHRNA1-207ENST00000435083 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
CHRNA1-207ENST00000435083 OR5AL1P0C617 328 aa7.3□□□□□ -1.24
CHRNA1-207ENST00000435083 AP1S3Q96PC3 154 aa7.3□□□□□ -1.24
CHRNA1-207ENST00000435083 GFRA4Q9GZZ7 299 aa7.3□□□□□ -1.24
CHRNA1-207ENST00000435083 MANBALQ9NQG1 85 aa7.3□□□□□ -1.24
CHRNA1-207ENST00000435083 PAGE4O60829 102 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 MGPP08493 103 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 GZMBP10144 247 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 COX6A2Q02221 97 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 MAJINQ3KP22 176 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 BAGE2Q86Y30 109 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 EIF5A2Q9GZV4 153 aaKnown RBP7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 IGKV2-24A0A0C4DH68 120 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 NDUFS6O75380 124 aaKnown RBP7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 S100A9P06702 114 aaKnown RBP7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 WDR73Q6P4I2 378 aa7.29□□□□□ -1.24
CHRNA1-207ENST00000435083 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 A0A1B0GUV1 79 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 A0A1B0GV50 99 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 H7C1H1 209 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 M0QY20 66 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 BCL2P10415 239 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 RPS10P46783 165 aaKnown RBP7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 CFAP161Q6P656 301 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 GNG13Q9P2W3 67 aa7.28□□□□□ -1.24
CHRNA1-207ENST00000435083 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 GAGE12HA6NDE8 117 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 HIGD2BQ4VC39 106 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 SUMO4Q6EEV6 95 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 STPG4Q8N801 248 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 MLST8Q9BVC4 326 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 TNXBP22105 4242 aa7.27□□□□□ -1.25
CHRNA1-207ENST00000435083 IGKV3OR2-268A0A0C4DH90 116 aa7.26□□□□□ -1.25
CHRNA1-207ENST00000435083 TMEM218A2RU14 115 aa7.26□□□□□ -1.25
CHRNA1-207ENST00000435083 UBE2L6O14933 153 aa7.26□□□□□ -1.25
CHRNA1-207ENST00000435083 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
CHRNA1-207ENST00000435083 TPPP3Q9BW30 176 aa7.26□□□□□ -1.25
CHRNA1-207ENST00000435083 CCL20P78556 96 aa7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 MEF2BQ02080 365 aaPredicted RBP7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 RASL11AQ6T310 242 aa7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 REG3GQ6UW15 175 aa7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 SEC11CQ9BY50 192 aa7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 GAS8-AS1O95177 125 aa7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 AMTP48728 403 aa7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
CHRNA1-207ENST00000435083 F8W036 122 aa7.24□□□□□ -1.25
CHRNA1-207ENST00000435083 PDE6DO43924 150 aa7.24□□□□□ -1.25
CHRNA1-207ENST00000435083 COTL1Q14019 142 aa7.24□□□□□ -1.25
CHRNA1-207ENST00000435083 FER1L6-AS1Q8NA97 138 aa7.24□□□□□ -1.25
CHRNA1-207ENST00000435083 PGLYRP4Q96LB8 373 aa7.24□□□□□ -1.25
CHRNA1-207ENST00000435083 NIT2Q9NQR4 276 aa7.24□□□□□ -1.25
CHRNA1-207ENST00000435083 A0A096LNI7 61 aa7.23□□□□□ -1.25
CHRNA1-207ENST00000435083 TMEM250H0YL14 139 aa7.23□□□□□ -1.25
CHRNA1-207ENST00000435083 SRSF3P84103 164 aaKnown RBP7.23□□□□□ -1.25
CHRNA1-207ENST00000435083 SVBPQ8N300 66 aa7.23□□□□□ -1.25
CHRNA1-207ENST00000435083 CARHSP1Q9Y2V2 147 aaKnown RBP7.23□□□□□ -1.25
CHRNA1-207ENST00000435083 IGLC6P0CF74 106 aa7.22□□□□□ -1.25
CHRNA1-207ENST00000435083 CACNG7P62955 275 aa7.22□□□□□ -1.25
CHRNA1-207ENST00000435083 C10orf91Q5T1B1 145 aa7.22□□□□□ -1.25
CHRNA1-207ENST00000435083 OR2D3Q8NGH3 330 aa7.22□□□□□ -1.25
CHRNA1-207ENST00000435083 CHCHD10Q8WYQ3 142 aaPredicted RBP7.22□□□□□ -1.25
CHRNA1-207ENST00000435083 APOC3P02656 99 aa7.21□□□□□ -1.25
CHRNA1-207ENST00000435083 SRP19P09132 144 aaKnown RBP7.21□□□□□ -1.25
CHRNA1-207ENST00000435083 FAM74A3Q4VXF1 159 aa7.21□□□□□ -1.25
CHRNA1-207ENST00000435083 GVQW2A0A096LPI5 108 aaPredicted RBP7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 SNAPINO95295 136 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 TRGC1P0CF51 173 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 RPL35P42766 123 aaKnown RBP7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 RPS20P60866 119 aaKnown RBP7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 SRSF9Q13242 221 aaKnown RBP eCLIP7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 AMMECR1LQ6DCA0 310 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 C9JQL5 133 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 ADCYAP1P18509 176 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 CEBPGP53567 150 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 RNASEKQ6P5S7 137 aaKnown RBP7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 Q6ZRP5 223 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 LINC00474Q9P2X8 69 aa7.2□□□□□ -1.26
CHRNA1-207ENST00000435083 F2Z2F3 143 aa7.19□□□□□ -1.26
CHRNA1-207ENST00000435083 NTF3P20783 257 aa7.19□□□□□ -1.26
CHRNA1-207ENST00000435083 PNRC1Q12796 327 aaPredicted RBP7.19□□□□□ -1.26
CHRNA1-207ENST00000435083 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
CHRNA1-207ENST00000435083 C11orf52Q96A22 123 aa7.19□□□□□ -1.26
CHRNA1-207ENST00000435083 CENPWQ5EE01 88 aa7.18□□□□□ -1.26
CHRNA1-207ENST00000435083 LINC00526Q96FQ7 95 aa7.18□□□□□ -1.26
CHRNA1-207ENST00000435083 PKIGQ9Y2B9 76 aa7.18□□□□□ -1.26
CHRNA1-207ENST00000435083 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
CHRNA1-207ENST00000435083 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms