RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 IGF2-ASQ6U949 168 aa8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 APRG1Q8IVJ8 170 aa8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 Q9UF83 564 aa8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 MOB4Q9Y3A3 225 aa8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 HRNRQ86YZ3 2850 aaPredicted RBP8.51□□□□□ -1.05
HMGCS1-202ENST00000433297 DAZ1Q9NQZ3 744 aaKnown RBP8.5□□□□□ -1.05
HMGCS1-202ENST00000433297 VSIG2Q96IQ7 327 aa8.5□□□□□ -1.05
HMGCS1-202ENST00000433297 CEP295Q9C0D2 2601 aa8.5□□□□□ -1.05
HMGCS1-202ENST00000433297 FAM240AA0A1B0GVK7 77 aa8.5□□□□□ -1.05
HMGCS1-202ENST00000433297 IGHV1OR15-1A0A075B7D0 117 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 TRBV7-7A0A0K0K1E9 115 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 EDA2RQ9HAV5 297 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 BLCAPP62952 87 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 MRPS36P82909 103 aaKnown RBP8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 BPESC1Q9GZL8 116 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
HMGCS1-202ENST00000433297 DAZ2Q13117 558 aaKnown RBP8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 DAZ4Q86SG3 579 aaKnown RBP8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 DAZ3Q9NR90 486 aaKnown RBP8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 HERVK_113P63121 156 aa8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 GAGE2AQ6NT46 116 aa8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 CDKN2A-AS1Q9UH64 79 aa8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 KLRB1Q12918 225 aa8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 C3orf22Q8N5N4 141 aa8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 ATRXP46100 2492 aa8.48□□□□□ -1.05
HMGCS1-202ENST00000433297 NDUFA7O95182 113 aa8.47□□□□□ -1.05
HMGCS1-202ENST00000433297 KLK9Q2XQG4 91 aa8.47□□□□□ -1.05
HMGCS1-202ENST00000433297 DGAT2L7PQ6IED9 249 aa8.47□□□□□ -1.05
HMGCS1-202ENST00000433297 LINC01600Q96MT4 127 aa8.47□□□□□ -1.05
HMGCS1-202ENST00000433297 CITED2Q99967 270 aaPredicted RBP8.47□□□□□ -1.05
HMGCS1-202ENST00000433297 DOPEY2Q9Y3R5 2298 aa8.47□□□□□ -1.05
HMGCS1-202ENST00000433297 BAALC-AS2P0C853 105 aa8.47□□□□□ -1.05
HMGCS1-202ENST00000433297 Q8N2B8 174 aa8.46□□□□□ -1.05
HMGCS1-202ENST00000433297 DCANP1Q8TF63 244 aa8.46□□□□□ -1.05
HMGCS1-202ENST00000433297 C11orf71Q6IPW1 123 aa8.46□□□□□ -1.05
HMGCS1-202ENST00000433297 Q9H8V8 135 aa8.46□□□□□ -1.05
HMGCS1-202ENST00000433297 HOXD3P31249 432 aaPredicted RBP8.46□□□□□ -1.06
HMGCS1-202ENST00000433297 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
HMGCS1-202ENST00000433297 Q9HAA7 133 aa8.46□□□□□ -1.06
HMGCS1-202ENST00000433297 SNRPD3P62318 126 aaKnown RBP8.45□□□□□ -1.06
HMGCS1-202ENST00000433297 DEFB121Q5J5C9 76 aa8.45□□□□□ -1.06
HMGCS1-202ENST00000433297 USMG5Q96IX5 58 aa8.45□□□□□ -1.06
HMGCS1-202ENST00000433297 H3BUX3 64 aa8.45□□□□□ -1.06
HMGCS1-202ENST00000433297 ACYP1P07311 99 aa8.45□□□□□ -1.06
HMGCS1-202ENST00000433297 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
HMGCS1-202ENST00000433297 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
HMGCS1-202ENST00000433297 TRAV13-1A0A0B4J241 112 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 TINCRA0A1B0GVN0 87 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 A0A1W2PPR1 153 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 UQCRQO14949 82 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 LINC00308Q8TCZ7 52 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 CUBNO60494 3623 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 COX7A2LO14548 114 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 ATP5J2P56134 94 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
HMGCS1-202ENST00000433297 NOTCH3Q9UM47 2321 aa8.43□□□□□ -1.06
HMGCS1-202ENST00000433297 C2CD3Q4AC94 2353 aa8.43□□□□□ -1.06
HMGCS1-202ENST00000433297 IGHG2P01859 326 aa8.43□□□□□ -1.06
HMGCS1-202ENST00000433297 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
HMGCS1-202ENST00000433297 TIRAPP58753 221 aa8.43□□□□□ -1.06
HMGCS1-202ENST00000433297 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
HMGCS1-202ENST00000433297 LMO4P61968 165 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 C19orf54Q5BKX5 351 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 Q6ZSN1 163 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 NRGNQ92686 78 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 COX6A2Q02221 97 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 CSPG4Q6UVK1 2322 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 ZNF292O60281 2723 aa8.42□□□□□ -1.06
HMGCS1-202ENST00000433297 SPG11Q96JI7 2443 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 PTPRQQ9UMZ3 2332 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 IGKV3D-7A0A0C4DH55 119 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 C10orf99Q6UWK7 81 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 IGHV4-38-2P0DP08 117 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 CHCHD7Q9BUK0 85 aa8.41□□□□□ -1.06
HMGCS1-202ENST00000433297 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.06
HMGCS1-202ENST00000433297 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.06
HMGCS1-202ENST00000433297 SOSTDC1Q6X4U4 206 aa8.4□□□□□ -1.06
HMGCS1-202ENST00000433297 NDUFA1O15239 70 aa8.39□□□□□ -1.07
HMGCS1-202ENST00000433297 RBMY1A1P0DJD3 496 aaKnown RBP8.39□□□□□ -1.07
HMGCS1-202ENST00000433297 RBMY1CP0DJD4 496 aa8.39□□□□□ -1.07
HMGCS1-202ENST00000433297 COX7CP15954 63 aa8.39□□□□□ -1.07
HMGCS1-202ENST00000433297 RBMY1FQ15415 496 aaKnown RBP8.39□□□□□ -1.07
HMGCS1-202ENST00000433297 VPS13CQ709C8 3753 aa8.39□□□□□ -1.07
HMGCS1-202ENST00000433297 J3KT08 172 aa8.38□□□□□ -1.07
HMGCS1-202ENST00000433297 CRYBG3Q68DQ2 2970 aa8.38□□□□□ -1.07
HMGCS1-202ENST00000433297 FBXL19-AS1Q494R0 122 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms