RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 COPS9Q8WXC6 57 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 NUDT11Q96G61 164 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 MLST8Q9BVC4 326 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 MAP1LC3CQ9BXW4 147 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 MXRA5Q9NR99 2828 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 LOC107984640A0A0U1RRK4 108 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 LINC01549A6NIU2 74 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 CCL25O15444 150 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 SCGB1C2P0DMR2 95 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 C9orf85Q96MD7 179 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 USP17L23D6RBM5 183 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 DNAH10OSP0CZ25 163 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 RPL13AP40429 203 aaKnown RBP3.19□□□□□ -1.9
UBE4A-202ENST00000431736 SERTAD4-AS1Q5TG53 156 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 TSTD3H0UI37 97 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 UQCC3Q6UW78 93 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 NIT1Q86X76 327 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 SMIM12Q96EX1 92 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 HSPB8Q9UJY1 196 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 CELSR3Q9NYQ7 3312 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 TMEM250H0YL14 139 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 ATP5LO75964 103 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 SRSF9Q13242 221 aaKnown RBP eCLIP3.19□□□□□ -1.9
UBE4A-202ENST00000431736 ZFAND2AQ8N6M9 145 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
UBE4A-202ENST00000431736 TRBV6-1A0A0K0K1D8 114 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 SCO2A0A1W2PP80 73 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 ATRAIDQ6UW56 229 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 SDHCQ99643 169 aaPredicted RBP3.18□□□□□ -1.9
UBE4A-202ENST00000431736 IGKV3D-20A0A0C4DH25 116 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 H7C423 109 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 PRM2P04554 102 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 LGALS3P17931 250 aaKnown RBP3.18□□□□□ -1.9
UBE4A-202ENST00000431736 CCL20P78556 96 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 TMEM170AQ8WVE7 144 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 CXCL1P09341 107 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 SYCNQ0VAF6 134 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 HIGD2BQ4VC39 106 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 TEX43Q6ZNM6 134 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 PPBPP02775 128 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 FGF6P10767 208 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 Q8N1X5 172 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 SMDT1Q9H4I9 107 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 PLA2G2DQ9UNK4 145 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 ADGRG4Q8IZF6 3080 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 HOXA5P20719 270 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 RNF185Q96GF1 192 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 CYSLTR1Q9Y271 337 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 AGRNO00468 2067 aa3.18□□□□□ -1.9
UBE4A-202ENST00000431736 LOC100131303A0A0U1RQF7 123 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 PDZD11Q5EBL8 140 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 TMEM170BQ5T4T1 132 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 PRELID3AQ96N28 172 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 TMEM191AQ9H0A3 160 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 SDHAF1A6NFY7 115 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 LYZL1Q6UWQ5 148 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 ORAOV1Q8WV07 137 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 PSMB2P49721 201 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 LINC01559Q495D7 138 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 TMEM136Q6ZRR5 245 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 Q8N814 137 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 SCGB3A1Q96QR1 104 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 LINC00587B1AMM8 73 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 SPAG11BQ08648 103 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 STAB2Q8WWQ8 2551 aa3.17□□□□□ -1.9
UBE4A-202ENST00000431736 NMUP48645 174 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 STPG4Q8N801 248 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 CHCHD10Q8WYQ3 142 aaPredicted RBP3.16□□□□□ -1.9
UBE4A-202ENST00000431736 NXT2Q9NPJ8 142 aaKnown RBP3.16□□□□□ -1.9
UBE4A-202ENST00000431736 H2BFSP57053 126 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 RBX1P62877 108 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 ORMDL2Q53FV1 153 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 LINC00518Q8N0U6 118 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 TMEM242Q9NWH2 141 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
UBE4A-202ENST00000431736 ORMDL3Q8N138 153 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 OR10AG1Q8NH19 301 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 DIRC1Q969H9 104 aa3.16□□□□□ -1.9
UBE4A-202ENST00000431736 SPENQ96T58 3664 aaKnown RBP3.16□□□□□ -1.9
UBE4A-202ENST00000431736 IGLV4-69A0A075B6H9 119 aa3.15□□□□□ -1.9
UBE4A-202ENST00000431736 PTH2Q96A98 100 aa3.15□□□□□ -1.9
UBE4A-202ENST00000431736 Q6ZRP5 223 aa3.15□□□□□ -1.91
UBE4A-202ENST00000431736 FAM167A-AS1Q96KT0 104 aa3.15□□□□□ -1.91
UBE4A-202ENST00000431736 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
UBE4A-202ENST00000431736 CLLU1Q5K131 121 aa3.15□□□□□ -1.91
UBE4A-202ENST00000431736 SUMO4Q6EEV6 95 aa3.15□□□□□ -1.91
UBE4A-202ENST00000431736 GIG44P09565 113 aaPredicted RBP3.15□□□□□ -1.91
UBE4A-202ENST00000431736 NBPF19A0A087WUL8 3843 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 IGKV2D-26A0A0A0MRZ7 120 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 SLC25A20O43772 301 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 PRSS46E5RG02 174 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.14□□□□□ -1.91
UBE4A-202ENST00000431736 FOXA3P55318 350 aaPredicted RBP3.14□□□□□ -1.91
UBE4A-202ENST00000431736 LYRM7Q5U5X0 104 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 Q6ZR54 194 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 NF1P21359 2839 aa3.14□□□□□ -1.91
UBE4A-202ENST00000431736 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms