RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NEK7Q8TDX7 302 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 YPEL2Q96QA6 119 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 GINS3Q9BRX5 216 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM147Q9BVK8 224 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 YIPF3Q9GZM5 350 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 IL20Q9NYY1 176 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 CCDC167Q9P0B6 97 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 ABRACLQ9P1F3 81 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 JPT1Q9UK76 154 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 DNAH11Q96DT5 4516 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 APOBP04114 4563 aaKnown RBP1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 HMCN2Q8NDA2 5059 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 HMSDA8MTL9 139 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR7C1O76099 320 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 GADD45GO95257 159 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 IGLV3-1P01715 115 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 PPBPP02775 128 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 HMGN1P05114 100 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 GYPBP06028 91 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 DEFB131AP59861 70 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 RPL37AP61513 92 aaKnown RBP1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 SNRPGP62308 76 aaKnown RBP1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 MRPS25P82663 173 aaKnown RBP1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 MRPS15P82914 257 aaKnown RBP1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 CDK10Q15131 360 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 Q1T7F1 81 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM244Q5VVB8 128 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 DHFR2Q86XF0 187 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 IFT20Q8IY31 132 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 PXT1Q8NFP0 134 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 VSTM2AQ8TAG5 236 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 GNPDA2Q8TDQ7 276 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 DGCR14Q96DF8 476 aaKnown RBP1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 GPER1Q99527 375 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 CGREF1Q99674 301 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 RHPN1-AS1Q9BWJ2 59 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 COMMD5Q9GZQ3 224 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 RNASE7Q9H1E1 156 aaKnown RBP1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 TAF9BQ9HBM6 251 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 C8orf4Q9NR00 106 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 GID8Q9NWU2 228 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 TVP23BQ9NYZ1 205 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 SMPXQ9UHP9 88 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR52A1Q9UKL2 312 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 LY96Q9Y6Y9 160 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 R4GMQ9 66 aa1.1□□□□□ -2.23
HMGB1P27-201ENST00000431429 DNAH5Q8TE73 4624 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 IGKV3-7A0A075B6H7 116 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 A6NIN4 97 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 SAA2P0DJI9 122 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 MT1HL1P0DM35 61 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 DEFB130BP0DP73 79 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 DEFB130AP0DP74 79 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 FXYD6P3P58550 94 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 ESRGQ1W209 222 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 MPV17LQ2QL34 196 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 KLK9Q2XQG4 91 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 LINC01590Q5TEZ4 76 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 Q6ZSA8 131 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 COA5Q86WW8 74 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 Q8N814 137 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 GDPD1Q8N9F7 314 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR4B1Q8NGF8 309 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR8J3Q8NGG0 315 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 DPH3Q96FX2 82 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 LINC01600Q96MT4 127 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 CMC2Q9NRP2 79 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 RABAC1Q9UI14 185 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 KLK9Q9UKQ9 250 aa1.09□□□□□ -2.23
HMGB1P27-201ENST00000431429 LRP1BQ9NZR2 4599 aa1.09□□□□□ -2.24
HMGB1P27-201ENST00000431429 DNAH17Q9UFH2 4485 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 ZNF670-ZNF695F2Z2N8 137 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 PRH1P02810 166 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 CD2P06729 351 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRGC1P0CF51 173 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 APELAP0DMC3 54 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 ETV6P41212 452 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 HAMPP81172 84 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 Q56UQ5 140 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 SAMD13Q5VXD3 122 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 C7orf65Q6ZTY9 151 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 ARPINQ7Z6K5 226 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 CROCCP2Q86T23 111 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR51A2Q8NGJ7 313 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR4K15Q8NH41 348 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 TMEM167AQ8TBQ9 72 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 TEX47Q8TBZ9 253 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 PAIP2Q9BPZ3 127 aaKnown RBP1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 SH3BGRL3Q9H299 93 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 DOK5Q9P104 306 aa1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 TIMM8BQ9Y5J9 83 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 DYNC1H1Q14204 4646 aaKnown RBP1.08□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRAV9-1A0A075B6T8 112 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 IGKV1-9A0A0C4DH69 117 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 BBIP1A8MTZ0 92 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 J3QRK9 145 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 GEMIN2O14893 280 aaKnown RBP1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 PDE6DO43924 150 aa1.07□□□□□ -2.24
HMGB1P27-201ENST00000431429 PITX3O75364 302 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms