RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 RASL10AQ92737 203 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 SNHG12Q9BXW3 62 aa6.21□□□□□ -1.42
HDAC1-202ENST00000428704 TRBV6-5A0A0K0K1A5 114 aa6.2□□□□□ -1.42
HDAC1-202ENST00000428704 G0S2P27469 103 aa6.2□□□□□ -1.42
HDAC1-202ENST00000428704 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
HDAC1-202ENST00000428704 ORMDL2Q53FV1 153 aa6.2□□□□□ -1.42
HDAC1-202ENST00000428704 TRPT1Q86TN4 253 aaKnown RBP6.2□□□□□ -1.42
HDAC1-202ENST00000428704 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
HDAC1-202ENST00000428704 SYT8Q8NBV8 401 aa6.2□□□□□ -1.42
HDAC1-202ENST00000428704 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
HDAC1-202ENST00000428704 KNCNA6PVL3 124 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 RTL8CO15255 209 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 GIG44P09565 113 aaPredicted RBP6.19□□□□□ -1.42
HDAC1-202ENST00000428704 SMIM17P0DL12 118 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 SPINK13Q1W4C9 94 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 MAJINQ3KP22 176 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 PMCHL2Q9BQD1 86 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 CSTL1Q9H114 145 aa6.19□□□□□ -1.42
HDAC1-202ENST00000428704 TRAV26-2A0A0B4J265 109 aa6.18□□□□□ -1.42
HDAC1-202ENST00000428704 CRYGDP07320 174 aa6.18□□□□□ -1.42
HDAC1-202ENST00000428704 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
HDAC1-202ENST00000428704 POLR2KP53803 58 aaKnown RBP6.18□□□□□ -1.42
HDAC1-202ENST00000428704 TCTAP57738 103 aa6.18□□□□□ -1.42
HDAC1-202ENST00000428704 Q6ZN92 141 aa6.18□□□□□ -1.42
HDAC1-202ENST00000428704 MDFICQ9P1T7 246 aa6.18□□□□□ -1.42
HDAC1-202ENST00000428704 GOLT1BQ9Y3E0 138 aa6.18□□□□□ -1.42
HDAC1-202ENST00000428704 TIMM8BQ9Y5J9 83 aaPredicted RBP6.18□□□□□ -1.42
HDAC1-202ENST00000428704 TRAV12-2A0A075B6T6 113 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 TRAV12-1A0A0B4J245 112 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 hDV102S1A0JD36 115 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 VCYO14598 125 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 DLEU1O43261 78 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 IGKV3-20P01619 116 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 RBMY1A1P0DJD3 496 aaKnown RBP6.17□□□□□ -1.42
HDAC1-202ENST00000428704 COX8AP10176 69 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 ODF1Q14990 250 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 TOMM6Q96B49 74 aa6.17□□□□□ -1.42
HDAC1-202ENST00000428704 TRBV27A0A0K0K1C4 114 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 TCAPO15273 167 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 SIVA1O15304 175 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 RBMY1CP0DJD4 496 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 NUTF2P61970 127 aaKnown RBP6.16□□□□□ -1.42
HDAC1-202ENST00000428704 STHQ8IWL8 128 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 CSNK1G2-AS1Q8NCQ2 148 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 SPXQ9BT56 116 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 C11orf68Q9H3H3 251 aaKnown RBP6.16□□□□□ -1.42
HDAC1-202ENST00000428704 HHLA3Q9XRX5 114 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
HDAC1-202ENST00000428704 A0A087WX48 190 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 M0QY20 66 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 M0R2N4 97 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 PRSS1P07477 247 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 MGPP08493 103 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 FXYD7P58549 80 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 MORN3Q6PF18 240 aaPredicted RBP6.15□□□□□ -1.42
HDAC1-202ENST00000428704 Q8NAQ8 132 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 OR11H2Q8NH07 326 aa6.15□□□□□ -1.42
HDAC1-202ENST00000428704 RPL39LQ96EH5 51 aaKnown RBP6.15□□□□□ -1.42
HDAC1-202ENST00000428704 A0A1B0GV90 55 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 CBY3A6NI87 242 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 A8MWV9 139 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 IGLL5B9A064 214 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.14□□□□□ -1.43
HDAC1-202ENST00000428704 M0R2P5 195 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 DEFB4AO15263 64 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 NUDT3O95989 172 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 ZNF415Q09FC8 603 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 ZNF876PQ49A33 203 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 COL5A1-AS1Q5SY13 56 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 ERASQ7Z444 233 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 BOD1L2Q8IYS8 172 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 KIR2DL4Q99706 377 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 JPT2Q9H910 190 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 APLNQ9ULZ1 77 aa6.14□□□□□ -1.43
HDAC1-202ENST00000428704 IGHV4-28A0A0C4DH34 117 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 H0Y8G0 127 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 H7C1H1 209 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 DPM2O94777 84 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 INSP01308 110 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 IGKCP01834 107 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 INAFM2P0DMQ5 153 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 FGF6P10767 208 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 NANOS2P60321 138 aaKnown RBP6.13□□□□□ -1.43
HDAC1-202ENST00000428704 RHOHQ15669 191 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 C2orf66Q6UXQ4 117 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 C11orf72Q8NBR9 251 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 NEXN-AS1Q8NBZ9 246 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 C11orf45Q8TAV5 145 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 C18orf15Q96N68 181 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
HDAC1-202ENST00000428704 A0A087WWL8 130 aa6.12□□□□□ -1.43
HDAC1-202ENST00000428704 SDHAF1A6NFY7 115 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms