RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
AC055811.2-201ENST00000427497 SCGB3A1Q96QR1 104 aa12.68□□□□□ -0.38
AC055811.2-201ENST00000427497 HUWE1Q7Z6Z7 4374 aaKnown RBP12.68□□□□□ -0.38
AC055811.2-201ENST00000427497 TRGV4A0A0C4DH28 118 aa12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 ERASQ7Z444 233 aa12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 VAMP8Q9BV40 100 aa12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 DEFB4AO15263 64 aa12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 RPL36AP83881 106 aaKnown RBP12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 ATOH7Q8N100 152 aa12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 ZNRF2Q8NHG8 242 aa12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 RPL36ALQ969Q0 106 aaKnown RBP12.67□□□□□ -0.38
AC055811.2-201ENST00000427497 RPL39P62891 51 aaKnown RBP12.66□□□□□ -0.38
AC055811.2-201ENST00000427497 C20orf203Q8NBC4 194 aa12.66□□□□□ -0.38
AC055811.2-201ENST00000427497 ZMAT4Q9H898 229 aa12.66□□□□□ -0.38
AC055811.2-201ENST00000427497 IGIPA6NJ69 53 aa12.65□□□□□ -0.38
AC055811.2-201ENST00000427497 PRSS1P07477 247 aa12.65□□□□□ -0.38
AC055811.2-201ENST00000427497 UBE2D3P61077 147 aa12.65□□□□□ -0.38
AC055811.2-201ENST00000427497 PKIAP61925 76 aa12.65□□□□□ -0.38
AC055811.2-201ENST00000427497 UBE2D2P62837 147 aa12.65□□□□□ -0.38
AC055811.2-201ENST00000427497 PMCHL2Q9BQD1 86 aa12.65□□□□□ -0.38
AC055811.2-201ENST00000427497 PCP4L1A6NKN8 68 aa12.64□□□□□ -0.39
AC055811.2-201ENST00000427497 ODF1Q14990 250 aa12.64□□□□□ -0.39
AC055811.2-201ENST00000427497 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
AC055811.2-201ENST00000427497 PHLDA1Q8WV24 401 aaPredicted RBP12.64□□□□□ -0.39
AC055811.2-201ENST00000427497 TIMM17AQ99595 171 aa12.64□□□□□ -0.39
AC055811.2-201ENST00000427497 CELA1Q9UNI1 258 aa12.64□□□□□ -0.39
AC055811.2-201ENST00000427497 PAM16Q9Y3D7 125 aa12.64□□□□□ -0.39
AC055811.2-201ENST00000427497 IGHV3-38A0A0C4DH36 116 aa12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 COTL1Q14019 142 aa12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 Q6ZN92 141 aa12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 DAZ4Q86SG3 579 aaKnown RBP12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 CHCHD7Q9BUK0 85 aa12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 PRO1933Q9H354 126 aa12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 RETNQ9HD89 108 aa12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 DAZ3Q9NR90 486 aaKnown RBP12.63□□□□□ -0.39
AC055811.2-201ENST00000427497 TRAV12-1A0A0B4J245 112 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 GAGE12JA6NER3 117 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 SPART-AS1P0CW21 52 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 GAGE1Q13065 139 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 GAGE4Q13068 117 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 GAGE5Q13069 117 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 MAJINQ3KP22 176 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 GAGE13Q4V321 117 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 TMEM141Q96I45 108 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 PRADC1Q9BSG0 188 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 HHLA3Q9XRX5 114 aa12.62□□□□□ -0.39
AC055811.2-201ENST00000427497 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 TSTD3H0UI37 97 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 LINC00694P0DN24 101 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 DAD1P61803 113 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 BAALCQ8WXS3 180 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 A0A087WX48 190 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 SPATA45Q537H7 98 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 TM2D3Q9BRN9 247 aa12.61□□□□□ -0.39
AC055811.2-201ENST00000427497 DNAH7Q8WXX0 4024 aa12.6□□□□□ -0.39
AC055811.2-201ENST00000427497 TEX48A0A1B0GUV7 120 aa12.6□□□□□ -0.39
AC055811.2-201ENST00000427497 CRYBA4P53673 196 aa12.6□□□□□ -0.39
AC055811.2-201ENST00000427497 PRO0255Q9UI72 69 aa12.6□□□□□ -0.39
AC055811.2-201ENST00000427497 PYGO1Q9Y3Y4 419 aa12.59□□□□□ -0.39
AC055811.2-201ENST00000427497 hDV102S1A0JD36 115 aa12.58□□□□□ -0.4
AC055811.2-201ENST00000427497 NTM-AS1Q6ZSK4 140 aa12.58□□□□□ -0.4
AC055811.2-201ENST00000427497 MUC7Q8TAX7 377 aa12.58□□□□□ -0.4
AC055811.2-201ENST00000427497 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.4
AC055811.2-201ENST00000427497 GTSF1LQ9H1H1 148 aa12.57□□□□□ -0.4
AC055811.2-201ENST00000427497 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
AC055811.2-201ENST00000427497 ATP5G1P05496 136 aa12.57□□□□□ -0.4
AC055811.2-201ENST00000427497 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
AC055811.2-201ENST00000427497 F8VRH5 84 aa12.56□□□□□ -0.4
AC055811.2-201ENST00000427497 DPM2O94777 84 aa12.56□□□□□ -0.4
AC055811.2-201ENST00000427497 NPSP0C0P6 89 aa12.56□□□□□ -0.4
AC055811.2-201ENST00000427497 HSBP1L1C9JCN9 74 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 IGKCP01834 107 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 PMVKQ15126 192 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 RYR3Q15413 4870 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 CASC10Q5T4H9 136 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 FAM104AQ969W3 186 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 SPANXA1Q9NS26 97 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 CHTOPQ9Y3Y2 248 aaKnown RBP12.55□□□□□ -0.4
AC055811.2-201ENST00000427497 IGLV4-3A0A075B6K6 122 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 GYPEP15421 78 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 OPRPNQ99935 248 aaPredicted RBP12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 CST9LQ9H4G1 147 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 IGLC3P0DOY3 106 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 PLNP26678 52 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 VSIG2Q96IQ7 327 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 TIMM21Q9BVV7 248 aa12.54□□□□□ -0.4
AC055811.2-201ENST00000427497 PAX4O43316 350 aa12.53□□□□□ -0.4
AC055811.2-201ENST00000427497 DDTP30046 118 aa12.53□□□□□ -0.4
AC055811.2-201ENST00000427497 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
AC055811.2-201ENST00000427497 ZC2HC1BQ5TFG8 222 aa12.53□□□□□ -0.4
AC055811.2-201ENST00000427497 PAPPA-AS1Q5QFB9 102 aa12.52□□□□□ -0.4
AC055811.2-201ENST00000427497 CEMP1Q6PRD7 247 aaPredicted RBP12.51□□□□□ -0.41
AC055811.2-201ENST00000427497 STPG4Q8N801 248 aa12.51□□□□□ -0.41
AC055811.2-201ENST00000427497 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms