RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
FIRRE-201ENST00000427391 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 SIGMAR1Q99720 223 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 TRBV6-5A0A0K0K1A5 114 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 Q6ZSV7 163 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 SPAG8Q99932 426 aaPredicted RBP8.5□□□□□ -1.05
FIRRE-201ENST00000427391 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 IGLL5B9A064 214 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 G3V4G9 280 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 Q8N2B8 174 aa8.5□□□□□ -1.05
FIRRE-201ENST00000427391 HIVEP1P15822 2718 aa8.49□□□□□ -1.05
FIRRE-201ENST00000427391 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
FIRRE-201ENST00000427391 ESM1Q9NQ30 184 aa8.49□□□□□ -1.05
FIRRE-201ENST00000427391 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
FIRRE-201ENST00000427391 IGHV3OR16-12A0A075B7B8 117 aa8.48□□□□□ -1.05
FIRRE-201ENST00000427391 C4orf3Q8WVX3 66 aa8.48□□□□□ -1.05
FIRRE-201ENST00000427391 TIMM17AQ99595 171 aa8.48□□□□□ -1.05
FIRRE-201ENST00000427391 DNAJC9-AS1A6NH13 148 aa8.48□□□□□ -1.05
FIRRE-201ENST00000427391 DEFB114Q30KQ6 69 aa8.48□□□□□ -1.05
FIRRE-201ENST00000427391 MRPL16Q9NX20 251 aaKnown RBP8.48□□□□□ -1.05
FIRRE-201ENST00000427391 XCL2Q9UBD3 114 aa8.48□□□□□ -1.05
FIRRE-201ENST00000427391 SRSF9Q13242 221 aaKnown RBP eCLIP8.47□□□□□ -1.05
FIRRE-201ENST00000427391 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
FIRRE-201ENST00000427391 TMEM141Q96I45 108 aa8.47□□□□□ -1.05
FIRRE-201ENST00000427391 LINC01587Q99440 93 aa8.47□□□□□ -1.05
FIRRE-201ENST00000427391 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
FIRRE-201ENST00000427391 A0A0J9YXV3 536 aa8.47□□□□□ -1.05
FIRRE-201ENST00000427391 I3L3M4 83 aa8.47□□□□□ -1.05
FIRRE-201ENST00000427391 PEMTQ9UBM1 199 aa8.47□□□□□ -1.05
FIRRE-201ENST00000427391 H3BMG7 143 aa8.46□□□□□ -1.06
FIRRE-201ENST00000427391 CD28P10747 220 aa8.46□□□□□ -1.06
FIRRE-201ENST00000427391 TAL2Q16559 108 aa8.46□□□□□ -1.06
FIRRE-201ENST00000427391 LRRC75A-AS1Q8N1F1 130 aa8.46□□□□□ -1.06
FIRRE-201ENST00000427391 PTH2Q96A98 100 aa8.46□□□□□ -1.06
FIRRE-201ENST00000427391 ANK3Q12955 4377 aaKnown RBP8.46□□□□□ -1.06
FIRRE-201ENST00000427391 NSUN5P1Q3KNT7 163 aa8.46□□□□□ -1.06
FIRRE-201ENST00000427391 ODF3L2Q3SX64 289 aa8.46□□□□□ -1.06
FIRRE-201ENST00000427391 FN1P02751 2386 aaKnown RBP8.45□□□□□ -1.06
FIRRE-201ENST00000427391 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
FIRRE-201ENST00000427391 APOMO95445 188 aa8.45□□□□□ -1.06
FIRRE-201ENST00000427391 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
FIRRE-201ENST00000427391 GTSF1LQ9H1H1 148 aa8.45□□□□□ -1.06
FIRRE-201ENST00000427391 A0A0J9YY99 117 aa8.45□□□□□ -1.06
FIRRE-201ENST00000427391 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
FIRRE-201ENST00000427391 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 HERVK_113P61574 105 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 RPL24P83731 157 aaKnown RBP8.44□□□□□ -1.06
FIRRE-201ENST00000427391 RHOHQ15669 191 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 M0R2P5 195 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 WFDC2Q14508 124 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 RRN3P1Q2M238 152 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 CFAP126Q5VTH2 177 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 AMELXQ99217 191 aa8.44□□□□□ -1.06
FIRRE-201ENST00000427391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
FIRRE-201ENST00000427391 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
FIRRE-201ENST00000427391 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 A8MTW9 85 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 J3QQQ9 107 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 ZNF22P17026 224 aaPredicted RBP8.43□□□□□ -1.06
FIRRE-201ENST00000427391 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 ZNF415Q09FC8 603 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 GAGE5Q13069 117 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 GAGE6Q13070 117 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 NBEAL2Q6ZNJ1 2754 aa8.43□□□□□ -1.06
FIRRE-201ENST00000427391 HIVEP2P31629 2446 aa8.42□□□□□ -1.06
FIRRE-201ENST00000427391 TEX48A0A1B0GUV7 120 aa8.42□□□□□ -1.06
FIRRE-201ENST00000427391 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
FIRRE-201ENST00000427391 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
FIRRE-201ENST00000427391 A8MZ25 164 aa8.42□□□□□ -1.06
FIRRE-201ENST00000427391 CCL24O00175 119 aa8.42□□□□□ -1.06
FIRRE-201ENST00000427391 VWFP04275 2813 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 TRAV8-3A0A0A6YYJ7 113 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 IGHV3-53P01767 116 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 LGALS3P17931 250 aaKnown RBP8.41□□□□□ -1.06
FIRRE-201ENST00000427391 SH2D6Q7Z4S9 175 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 F8P00451 2351 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 RHODO00212 210 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 INSP01308 110 aa8.41□□□□□ -1.06
FIRRE-201ENST00000427391 A8MWV9 139 aa8.4□□□□□ -1.06
FIRRE-201ENST00000427391 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
FIRRE-201ENST00000427391 KRTAP1-1Q07627 177 aa8.4□□□□□ -1.06
FIRRE-201ENST00000427391 STHQ8IWL8 128 aa8.4□□□□□ -1.06
FIRRE-201ENST00000427391 LINC00467Q9BRT7 94 aa8.4□□□□□ -1.06
FIRRE-201ENST00000427391 CHCHD7Q9BUK0 85 aa8.4□□□□□ -1.06
FIRRE-201ENST00000427391 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.07
FIRRE-201ENST00000427391 IGHV3-30P01768 117 aa8.4□□□□□ -1.07
FIRRE-201ENST00000427391 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.07
FIRRE-201ENST00000427391 UBE2D1P51668 147 aa8.4□□□□□ -1.07
FIRRE-201ENST00000427391 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.07
FIRRE-201ENST00000427391 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
FIRRE-201ENST00000427391 ETDBQ3ZM63 59 aa8.39□□□□□ -1.07
FIRRE-201ENST00000427391 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
FIRRE-201ENST00000427391 SMR3AQ99954 134 aa8.39□□□□□ -1.07
FIRRE-201ENST00000427391 TRGV1A0A0A0MS02 117 aa8.39□□□□□ -1.07
FIRRE-201ENST00000427391 Q6ZUT4 128 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms