RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 IGLV4-60A0A075B6I1 120 aa13.41□□□□□ -0.26
UBXN4-204ENST00000426921 CNBPP62633 177 aaKnown RBP13.4□□□□□ -0.26
UBXN4-204ENST00000426921 GFRA4Q9GZZ7 299 aa13.4□□□□□ -0.26
UBXN4-204ENST00000426921 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
UBXN4-204ENST00000426921 K7EN84 100 aa13.39□□□□□ -0.27
UBXN4-204ENST00000426921 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
UBXN4-204ENST00000426921 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.39□□□□□ -0.27
UBXN4-204ENST00000426921 COTL1Q14019 142 aa13.38□□□□□ -0.27
UBXN4-204ENST00000426921 SDIM1Q6ZPB5 146 aa13.38□□□□□ -0.27
UBXN4-204ENST00000426921 OXTP01178 125 aa13.37□□□□□ -0.27
UBXN4-204ENST00000426921 TWIST1Q15672 202 aa13.37□□□□□ -0.27
UBXN4-204ENST00000426921 RNASE7Q9H1E1 156 aaKnown RBP13.37□□□□□ -0.27
UBXN4-204ENST00000426921 PANO1I0J062 215 aa13.36□□□□□ -0.27
UBXN4-204ENST00000426921 AMTP48728 403 aa13.36□□□□□ -0.27
UBXN4-204ENST00000426921 RPL37AP61513 92 aaKnown RBP13.36□□□□□ -0.27
UBXN4-204ENST00000426921 CIRBPQ14011 172 aaKnown RBP13.36□□□□□ -0.27
UBXN4-204ENST00000426921 GATD1Q8NB37 220 aa13.36□□□□□ -0.27
UBXN4-204ENST00000426921 OCC1Q8TAD7 63 aa13.36□□□□□ -0.27
UBXN4-204ENST00000426921 UBE2L6O14933 153 aa13.35□□□□□ -0.27
UBXN4-204ENST00000426921 GTSF1Q8WW33 167 aa13.35□□□□□ -0.27
UBXN4-204ENST00000426921 hDV102S1A0JD36 115 aa13.34□□□□□ -0.27
UBXN4-204ENST00000426921 TRAV26-2A0A0B4J265 109 aa13.33□□□□□ -0.28
UBXN4-204ENST00000426921 TMEM250H0YL14 139 aa13.33□□□□□ -0.28
UBXN4-204ENST00000426921 HMCN2Q8NDA2 5059 aa13.32□□□□□ -0.28
UBXN4-204ENST00000426921 NCR2O95944 276 aa13.31□□□□□ -0.28
UBXN4-204ENST00000426921 SLPIP03973 132 aa13.31□□□□□ -0.28
UBXN4-204ENST00000426921 FAM231DQ6ZW35 169 aa13.31□□□□□ -0.28
UBXN4-204ENST00000426921 LYPD6BQ8NI32 183 aa13.31□□□□□ -0.28
UBXN4-204ENST00000426921 IGHV3-64A0A075B6Q5 118 aa13.3□□□□□ -0.28
UBXN4-204ENST00000426921 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
UBXN4-204ENST00000426921 HNRNPA3P51991 378 aaKnown RBP13.3□□□□□ -0.28
UBXN4-204ENST00000426921 TEX261Q6UWH6 196 aa13.3□□□□□ -0.28
UBXN4-204ENST00000426921 Q6ZNX1 250 aa13.3□□□□□ -0.28
UBXN4-204ENST00000426921 RPL39LQ96EH5 51 aaKnown RBP13.3□□□□□ -0.28
UBXN4-204ENST00000426921 AP5S1Q9NUS5 200 aa13.3□□□□□ -0.28
UBXN4-204ENST00000426921 H7C423 109 aa13.29□□□□□ -0.28
UBXN4-204ENST00000426921 CT83Q5H943 113 aa13.29□□□□□ -0.28
UBXN4-204ENST00000426921 SMIM15Q7Z3B0 74 aa13.29□□□□□ -0.28
UBXN4-204ENST00000426921 C15orf56Q8N910 161 aa13.29□□□□□ -0.28
UBXN4-204ENST00000426921 FOXA3P55318 350 aaPredicted RBP13.28□□□□□ -0.28
UBXN4-204ENST00000426921 BLOC1S1P78537 153 aa13.28□□□□□ -0.28
UBXN4-204ENST00000426921 SERTAD4-AS1Q5TG53 156 aa13.28□□□□□ -0.28
UBXN4-204ENST00000426921 RNF185Q96GF1 192 aa13.28□□□□□ -0.28
UBXN4-204ENST00000426921 A8MWL6 223 aa13.27□□□□□ -0.29
UBXN4-204ENST00000426921 GATCO43716 136 aaKnown RBP13.27□□□□□ -0.29
UBXN4-204ENST00000426921 ALKAL2Q6UX46 152 aa13.27□□□□□ -0.29
UBXN4-204ENST00000426921 TRBV6-5A0A0K0K1A5 114 aa13.26□□□□□ -0.29
UBXN4-204ENST00000426921 GAGE12HA6NDE8 117 aa13.26□□□□□ -0.29
UBXN4-204ENST00000426921 SDHAF1A6NFY7 115 aa13.26□□□□□ -0.29
UBXN4-204ENST00000426921 APCSP02743 223 aa13.26□□□□□ -0.29
UBXN4-204ENST00000426921 AKAP14Q86UN6 197 aa13.26□□□□□ -0.29
UBXN4-204ENST00000426921 SPACA4Q8TDM5 124 aa13.26□□□□□ -0.29
UBXN4-204ENST00000426921 NDUFS6O75380 124 aaKnown RBP13.25□□□□□ -0.29
UBXN4-204ENST00000426921 AMMECR1LQ6DCA0 310 aa13.25□□□□□ -0.29
UBXN4-204ENST00000426921 CFAP161Q6P656 301 aa13.25□□□□□ -0.29
UBXN4-204ENST00000426921 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
UBXN4-204ENST00000426921 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
UBXN4-204ENST00000426921 FGF6P10767 208 aa13.24□□□□□ -0.29
UBXN4-204ENST00000426921 A0A087WYN8 130 aa13.23□□□□□ -0.29
UBXN4-204ENST00000426921 CHTF8P0CG12 524 aa13.23□□□□□ -0.29
UBXN4-204ENST00000426921 ZNF25P17030 456 aaPredicted RBP13.23□□□□□ -0.29
UBXN4-204ENST00000426921 CHCHD10Q8WYQ3 142 aaPredicted RBP13.23□□□□□ -0.29
UBXN4-204ENST00000426921 GVQW2A0A096LPI5 108 aaPredicted RBP13.22□□□□□ -0.29
UBXN4-204ENST00000426921 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
UBXN4-204ENST00000426921 I3L3M4 83 aa13.22□□□□□ -0.29
UBXN4-204ENST00000426921 RNASEKQ6P5S7 137 aaKnown RBP13.22□□□□□ -0.29
UBXN4-204ENST00000426921 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
UBXN4-204ENST00000426921 FAM231BA6NCW3 169 aa13.21□□□□□ -0.29
UBXN4-204ENST00000426921 LINC01551Q86U37 167 aa13.21□□□□□ -0.29
UBXN4-204ENST00000426921 PLAC8Q9NZF1 115 aa13.21□□□□□ -0.29
UBXN4-204ENST00000426921 ESDP10768 282 aa13.2□□□□□ -0.3
UBXN4-204ENST00000426921 RPS10P46783 165 aaKnown RBP13.2□□□□□ -0.3
UBXN4-204ENST00000426921 OR5A1Q8NGJ0 315 aa13.2□□□□□ -0.3
UBXN4-204ENST00000426921 TSKUQ8WUA8 353 aa13.2□□□□□ -0.3
UBXN4-204ENST00000426921 BORCS7Q96B45 105 aa13.2□□□□□ -0.3
UBXN4-204ENST00000426921 SMIM7Q9BQ49 75 aa13.2□□□□□ -0.3
UBXN4-204ENST00000426921 TMEM191AQ9H0A3 160 aa13.2□□□□□ -0.3
UBXN4-204ENST00000426921 GAS8-AS1O95177 125 aa13.19□□□□□ -0.3
UBXN4-204ENST00000426921 TSHBP01222 138 aa13.19□□□□□ -0.3
UBXN4-204ENST00000426921 FOXI1Q12951 378 aa13.19□□□□□ -0.3
UBXN4-204ENST00000426921 HIGD2BQ4VC39 106 aa13.19□□□□□ -0.3
UBXN4-204ENST00000426921 A0A1B0GUT8 65 aa13.18□□□□□ -0.3
UBXN4-204ENST00000426921 HIGD1CA8MV81 97 aa13.18□□□□□ -0.3
UBXN4-204ENST00000426921 PMCHP20382 165 aa13.18□□□□□ -0.3
UBXN4-204ENST00000426921 CEBPGP53567 150 aa13.18□□□□□ -0.3
UBXN4-204ENST00000426921 Q6ZRU5 148 aa13.18□□□□□ -0.3
UBXN4-204ENST00000426921 POLR2KP53803 58 aaKnown RBP13.17□□□□□ -0.3
UBXN4-204ENST00000426921 COX6A2Q02221 97 aa13.17□□□□□ -0.3
UBXN4-204ENST00000426921 BTF3L4Q96K17 158 aa13.17□□□□□ -0.3
UBXN4-204ENST00000426921 ST20Q9HBF5 79 aa13.17□□□□□ -0.3
UBXN4-204ENST00000426921 OSTCQ9NRP0 149 aa13.17□□□□□ -0.3
UBXN4-204ENST00000426921 TRBV27A0A0K0K1C4 114 aa13.16□□□□□ -0.3
UBXN4-204ENST00000426921 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
UBXN4-204ENST00000426921 DPH3Q96FX2 82 aa13.16□□□□□ -0.3
UBXN4-204ENST00000426921 MRAP2Q96G30 205 aa13.16□□□□□ -0.3
UBXN4-204ENST00000426921 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
UBXN4-204ENST00000426921 TMEM242Q9NWH2 141 aa13.16□□□□□ -0.3
UBXN4-204ENST00000426921 hCG_2014768A0A024R1R8 64 aa13.15□□□□□ -0.3
UBXN4-204ENST00000426921 MT1HL1P0DM35 61 aa13.15□□□□□ -0.3
UBXN4-204ENST00000426921 PRSS3P2Q8NHM4 247 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms