RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 Q8N1X5 172 aa9.61□□□□□ -0.87
NCKIPSD-205ENST00000426678 SRSF3P84103 164 aaKnown RBP9.6□□□□□ -0.87
NCKIPSD-205ENST00000426678 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
NCKIPSD-205ENST00000426678 LINC00269Q8N2A0 174 aa9.6□□□□□ -0.87
NCKIPSD-205ENST00000426678 DEFB104AQ8WTQ1 72 aa9.6□□□□□ -0.87
NCKIPSD-205ENST00000426678 RPL39LQ96EH5 51 aaKnown RBP9.6□□□□□ -0.87
NCKIPSD-205ENST00000426678 V9GYV3 84 aa9.6□□□□□ -0.87
NCKIPSD-205ENST00000426678 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
NCKIPSD-205ENST00000426678 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
NCKIPSD-205ENST00000426678 RIGQ13278 110 aa9.59□□□□□ -0.87
NCKIPSD-205ENST00000426678 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
NCKIPSD-205ENST00000426678 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
NCKIPSD-205ENST00000426678 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
NCKIPSD-205ENST00000426678 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
NCKIPSD-205ENST00000426678 NUP35Q8NFH5 326 aa9.58□□□□□ -0.88
NCKIPSD-205ENST00000426678 TMEM70Q9BUB7 260 aa9.58□□□□□ -0.88
NCKIPSD-205ENST00000426678 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
NCKIPSD-205ENST00000426678 NAT8BQ9UHF3 227 aa9.58□□□□□ -0.88
NCKIPSD-205ENST00000426678 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
NCKIPSD-205ENST00000426678 NCR2O95944 276 aa9.57□□□□□ -0.88
NCKIPSD-205ENST00000426678 APCSP02743 223 aa9.57□□□□□ -0.88
NCKIPSD-205ENST00000426678 XGP55808 180 aa9.57□□□□□ -0.88
NCKIPSD-205ENST00000426678 RAB14P61106 215 aa9.57□□□□□ -0.88
NCKIPSD-205ENST00000426678 REG3AQ06141 175 aa9.57□□□□□ -0.88
NCKIPSD-205ENST00000426678 KRTAP17-1Q9BYP8 105 aa9.57□□□□□ -0.88
NCKIPSD-205ENST00000426678 C20orf203Q8NBC4 194 aa9.56□□□□□ -0.88
NCKIPSD-205ENST00000426678 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
NCKIPSD-205ENST00000426678 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
NCKIPSD-205ENST00000426678 TRBV6-5A0A0K0K1A5 114 aa9.55□□□□□ -0.88
NCKIPSD-205ENST00000426678 PMCHP20382 165 aa9.55□□□□□ -0.88
NCKIPSD-205ENST00000426678 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
NCKIPSD-205ENST00000426678 ST20Q9HBF5 79 aa9.55□□□□□ -0.88
NCKIPSD-205ENST00000426678 IGLV10-54A0A075B6I4 117 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 SMIM27A0A1W2PRY6 76 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 USP17L23D6RBM5 183 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 I3L3M4 83 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 RAB4AP20338 218 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 AMMECR1LQ6DCA0 310 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 RNF185Q96GF1 192 aa9.54□□□□□ -0.88
NCKIPSD-205ENST00000426678 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
NCKIPSD-205ENST00000426678 GAS8-AS1O95177 125 aa9.53□□□□□ -0.88
NCKIPSD-205ENST00000426678 HAMPP81172 84 aa9.53□□□□□ -0.88
NCKIPSD-205ENST00000426678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.52□□□□□ -0.89
NCKIPSD-205ENST00000426678 IGKV2-29A2NJV5 120 aaPredicted RBP9.52□□□□□ -0.89
NCKIPSD-205ENST00000426678 H7C423 109 aa9.52□□□□□ -0.89
NCKIPSD-205ENST00000426678 RPS10P46783 165 aaKnown RBP9.52□□□□□ -0.89
NCKIPSD-205ENST00000426678 CAMPP49913 170 aa9.52□□□□□ -0.89
NCKIPSD-205ENST00000426678 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
NCKIPSD-205ENST00000426678 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
NCKIPSD-205ENST00000426678 A0A1B0GW15 77 aa9.51□□□□□ -0.89
NCKIPSD-205ENST00000426678 SMKR1H3BMG3 65 aa9.51□□□□□ -0.89
NCKIPSD-205ENST00000426678 PPP1R17O96001 155 aa9.51□□□□□ -0.89
NCKIPSD-205ENST00000426678 LINC01620Q4KN68 170 aa9.51□□□□□ -0.89
NCKIPSD-205ENST00000426678 FAM30AQ9NZY2 134 aa9.51□□□□□ -0.89
NCKIPSD-205ENST00000426678 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
NCKIPSD-205ENST00000426678 S100A8P05109 93 aa9.5□□□□□ -0.89
NCKIPSD-205ENST00000426678 FGF6P10767 208 aa9.5□□□□□ -0.89
NCKIPSD-205ENST00000426678 Q5VSD8 79 aa9.5□□□□□ -0.89
NCKIPSD-205ENST00000426678 KRTAP26-1Q6PEX3 210 aa9.5□□□□□ -0.89
NCKIPSD-205ENST00000426678 BTF3L4Q96K17 158 aa9.5□□□□□ -0.89
NCKIPSD-205ENST00000426678 TRBV27A0A0K0K1C4 114 aa9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 TSHBP01222 138 aa9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 ZNF25P17030 456 aaPredicted RBP9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 POLR2KP53803 58 aaKnown RBP9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 FAM104BQ5XKR9 115 aa9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 MRPL54Q6P161 138 aaKnown RBP9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
NCKIPSD-205ENST00000426678 VCYO14598 125 aa9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 PPP1R2P9O14990 202 aa9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 PRSS1P07477 247 aa9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 HBBP68871 147 aa9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 MRPL51Q4U2R6 128 aaKnown RBP9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 Q6ZSA8 131 aa9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 CLRN3Q8NCR9 226 aa9.48□□□□□ -0.89
NCKIPSD-205ENST00000426678 C7orf77A4D0Y5 90 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 F8W036 122 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 ESDP10768 282 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 FCER1GP30273 86 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 CLLU1Q5K131 121 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 NRACQ8N912 160 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 OR5A1Q8NGJ0 315 aa9.47□□□□□ -0.89
NCKIPSD-205ENST00000426678 FAM229AH3BQW9 127 aa9.46□□□□□ -0.9
NCKIPSD-205ENST00000426678 CKS2P33552 79 aa9.46□□□□□ -0.9
NCKIPSD-205ENST00000426678 DGAT2L7PQ6IED9 249 aa9.46□□□□□ -0.9
NCKIPSD-205ENST00000426678 KIR2DL4Q99706 377 aa9.46□□□□□ -0.9
NCKIPSD-205ENST00000426678 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
NCKIPSD-205ENST00000426678 hDV102S1A0JD36 115 aa9.45□□□□□ -0.9
NCKIPSD-205ENST00000426678 GAGE12HA6NDE8 117 aa9.45□□□□□ -0.9
NCKIPSD-205ENST00000426678 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
NCKIPSD-205ENST00000426678 AP5S1Q9NUS5 200 aa9.45□□□□□ -0.9
NCKIPSD-205ENST00000426678 MT-ND4LP03901 98 aa9.44□□□□□ -0.9
NCKIPSD-205ENST00000426678 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
NCKIPSD-205ENST00000426678 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
NCKIPSD-205ENST00000426678 ATP5L2Q7Z4Y8 100 aa9.44□□□□□ -0.9
NCKIPSD-205ENST00000426678 MRPL52Q86TS9 123 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms