RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 OSTCQ9NRP0 149 aa11.99□□□□□ -0.49
SMARCAL1-205ENST00000425815 IGLV4-60A0A075B6I1 120 aa11.98□□□□□ -0.49
SMARCAL1-205ENST00000425815 CRPP02741 224 aa11.98□□□□□ -0.49
SMARCAL1-205ENST00000425815 MIAQ16674 131 aa11.98□□□□□ -0.49
SMARCAL1-205ENST00000425815 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
SMARCAL1-205ENST00000425815 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
SMARCAL1-205ENST00000425815 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
SMARCAL1-205ENST00000425815 GFRA4Q9GZZ7 299 aa11.98□□□□□ -0.49
SMARCAL1-205ENST00000425815 A0A1B0GUV1 79 aa11.97□□□□□ -0.49
SMARCAL1-205ENST00000425815 GAS8-AS1O95177 125 aa11.97□□□□□ -0.49
SMARCAL1-205ENST00000425815 V9GYV3 84 aa11.97□□□□□ -0.49
SMARCAL1-205ENST00000425815 HIGD1CA8MV81 97 aa11.96□□□□□ -0.49
SMARCAL1-205ENST00000425815 Q5VSD8 79 aa11.96□□□□□ -0.49
SMARCAL1-205ENST00000425815 ISOC2Q96AB3 205 aa11.96□□□□□ -0.49
SMARCAL1-205ENST00000425815 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
SMARCAL1-205ENST00000425815 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-205ENST00000425815 COTL1Q14019 142 aa11.95□□□□□ -0.5
SMARCAL1-205ENST00000425815 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
SMARCAL1-205ENST00000425815 SMIM15Q7Z3B0 74 aa11.95□□□□□ -0.5
SMARCAL1-205ENST00000425815 RNF185Q96GF1 192 aa11.95□□□□□ -0.5
SMARCAL1-205ENST00000425815 REG3AQ06141 175 aa11.94□□□□□ -0.5
SMARCAL1-205ENST00000425815 A0A1B0GUT8 65 aa11.93□□□□□ -0.5
SMARCAL1-205ENST00000425815 USP17L23D6RBM5 183 aa11.93□□□□□ -0.5
SMARCAL1-205ENST00000425815 AMTP48728 403 aa11.93□□□□□ -0.5
SMARCAL1-205ENST00000425815 FAM74A3Q4VXF1 159 aa11.93□□□□□ -0.5
SMARCAL1-205ENST00000425815 TMEM191AQ9H0A3 160 aa11.93□□□□□ -0.5
SMARCAL1-205ENST00000425815 TRBV6-5A0A0K0K1A5 114 aa11.92□□□□□ -0.5
SMARCAL1-205ENST00000425815 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
SMARCAL1-205ENST00000425815 NUP35Q8NFH5 326 aa11.92□□□□□ -0.5
SMARCAL1-205ENST00000425815 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
SMARCAL1-205ENST00000425815 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
SMARCAL1-205ENST00000425815 PRSS1P07477 247 aa11.91□□□□□ -0.5
SMARCAL1-205ENST00000425815 RAB4AP20338 218 aa11.91□□□□□ -0.5
SMARCAL1-205ENST00000425815 PEA15Q15121 130 aa11.91□□□□□ -0.5
SMARCAL1-205ENST00000425815 C14orf177Q52M58 125 aa11.9□□□□□ -0.5
SMARCAL1-205ENST00000425815 AMN1Q8IY45 258 aa11.9□□□□□ -0.5
SMARCAL1-205ENST00000425815 BORCS7Q96B45 105 aa11.9□□□□□ -0.5
SMARCAL1-205ENST00000425815 NAT8Q9UHE5 227 aa11.9□□□□□ -0.5
SMARCAL1-205ENST00000425815 SRRM2Q9UQ35 2752 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-205ENST00000425815 UBE2L6O14933 153 aa11.89□□□□□ -0.51
SMARCAL1-205ENST00000425815 NCR2O95944 276 aa11.89□□□□□ -0.51
SMARCAL1-205ENST00000425815 INAFM2P0DMQ5 153 aa11.89□□□□□ -0.51
SMARCAL1-205ENST00000425815 RPS10P46783 165 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-205ENST00000425815 ADIRFQ15847 76 aa11.89□□□□□ -0.51
SMARCAL1-205ENST00000425815 SMDT1Q9H4I9 107 aa11.89□□□□□ -0.51
SMARCAL1-205ENST00000425815 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-205ENST00000425815 TRAV8-4A0A0B4J246 113 aa11.88□□□□□ -0.51
SMARCAL1-205ENST00000425815 IGKV2-29A2NJV5 120 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-205ENST00000425815 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-205ENST00000425815 SMIM27A0A1W2PRY6 76 aa11.87□□□□□ -0.51
SMARCAL1-205ENST00000425815 FAM229AH3BQW9 127 aa11.87□□□□□ -0.51
SMARCAL1-205ENST00000425815 I3L3M4 83 aa11.87□□□□□ -0.51
SMARCAL1-205ENST00000425815 RIGQ13278 110 aa11.87□□□□□ -0.51
SMARCAL1-205ENST00000425815 TSHBP01222 138 aa11.86□□□□□ -0.51
SMARCAL1-205ENST00000425815 ESDP10768 282 aa11.86□□□□□ -0.51
SMARCAL1-205ENST00000425815 PMCHP20382 165 aa11.86□□□□□ -0.51
SMARCAL1-205ENST00000425815 SCXQ7RTU7 201 aa11.86□□□□□ -0.51
SMARCAL1-205ENST00000425815 ST20Q9HBF5 79 aa11.86□□□□□ -0.51
SMARCAL1-205ENST00000425815 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
SMARCAL1-205ENST00000425815 SMKR1H3BMG3 65 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 H7C423 109 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 APCSP02743 223 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 FGF6P10767 208 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 DGAT2L7PQ6IED9 249 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 MRAP2Q96G30 205 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
SMARCAL1-205ENST00000425815 NRACQ8N912 160 aa11.84□□□□□ -0.51
SMARCAL1-205ENST00000425815 TRBV27A0A0K0K1C4 114 aa11.83□□□□□ -0.52
SMARCAL1-205ENST00000425815 SLPIP03973 132 aa11.83□□□□□ -0.52
SMARCAL1-205ENST00000425815 C9orf163Q8N9P6 203 aa11.83□□□□□ -0.52
SMARCAL1-205ENST00000425815 CLRN3Q8NCR9 226 aa11.83□□□□□ -0.52
SMARCAL1-205ENST00000425815 CIRBP-AS1Q8TBR5 109 aa11.83□□□□□ -0.52
SMARCAL1-205ENST00000425815 TMEM242Q9NWH2 141 aa11.83□□□□□ -0.52
SMARCAL1-205ENST00000425815 HERC1Q15751 4861 aa11.83□□□□□ -0.52
SMARCAL1-205ENST00000425815 FAM104BQ5XKR9 115 aa11.82□□□□□ -0.52
SMARCAL1-205ENST00000425815 AMMECR1LQ6DCA0 310 aa11.82□□□□□ -0.52
SMARCAL1-205ENST00000425815 RNASEKQ6P5S7 137 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-205ENST00000425815 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
SMARCAL1-205ENST00000425815 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
SMARCAL1-205ENST00000425815 MRPL51Q4U2R6 128 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-205ENST00000425815 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
SMARCAL1-205ENST00000425815 SDIM1Q6ZPB5 146 aa11.8□□□□□ -0.52
SMARCAL1-205ENST00000425815 hDV102S1A0JD36 115 aa11.79□□□□□ -0.52
SMARCAL1-205ENST00000425815 PANO1I0J062 215 aa11.79□□□□□ -0.52
SMARCAL1-205ENST00000425815 VCYO14598 125 aa11.79□□□□□ -0.52
SMARCAL1-205ENST00000425815 CAMPP49913 170 aa11.79□□□□□ -0.52
SMARCAL1-205ENST00000425815 CNBPP62633 177 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-205ENST00000425815 C15orf56Q8N910 161 aa11.79□□□□□ -0.52
SMARCAL1-205ENST00000425815 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-205ENST00000425815 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
SMARCAL1-205ENST00000425815 KRTAP10-4P60372 401 aaPredicted RBP11.78□□□□□ -0.52
SMARCAL1-205ENST00000425815 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
SMARCAL1-205ENST00000425815 A0A1B0GXF2 115 aa11.77□□□□□ -0.53
SMARCAL1-205ENST00000425815 SUMO2P61956 95 aaKnown RBP11.77□□□□□ -0.53
SMARCAL1-205ENST00000425815 FOXI1Q12951 378 aa11.77□□□□□ -0.53
SMARCAL1-205ENST00000425815 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.53
SMARCAL1-205ENST00000425815 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.53
SMARCAL1-205ENST00000425815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-205ENST00000425815 A0A1B0GW15 77 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms