RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 Q6ZSA8 131 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 NTM-AS1Q6ZSK4 140 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 V9GYV3 84 aa8.57□□□□□ -1.04
VRK3-203ENST00000424804 IGHV1-24A0A0C4DH33 117 aa8.56□□□□□ -1.04
VRK3-203ENST00000424804 LECT2O14960 151 aa8.56□□□□□ -1.04
VRK3-203ENST00000424804 CRPP02741 224 aa8.56□□□□□ -1.04
VRK3-203ENST00000424804 Q8N976 141 aa8.56□□□□□ -1.04
VRK3-203ENST00000424804 RPL39LQ96EH5 51 aaKnown RBP8.56□□□□□ -1.04
VRK3-203ENST00000424804 SMDT1Q9H4I9 107 aa8.56□□□□□ -1.04
VRK3-203ENST00000424804 FAM229AH3BQW9 127 aa8.55□□□□□ -1.04
VRK3-203ENST00000424804 ATRAIDQ6UW56 229 aa8.55□□□□□ -1.04
VRK3-203ENST00000424804 CLPSL2Q6UWE3 100 aa8.55□□□□□ -1.04
VRK3-203ENST00000424804 RMI2Q96E14 147 aa8.55□□□□□ -1.04
VRK3-203ENST00000424804 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
VRK3-203ENST00000424804 GFRA4Q9GZZ7 299 aa8.55□□□□□ -1.04
VRK3-203ENST00000424804 UBE2L6O14933 153 aa8.54□□□□□ -1.04
VRK3-203ENST00000424804 AMTP48728 403 aa8.54□□□□□ -1.04
VRK3-203ENST00000424804 PKIAP61925 76 aa8.54□□□□□ -1.04
VRK3-203ENST00000424804 RIGQ13278 110 aa8.54□□□□□ -1.04
VRK3-203ENST00000424804 COTL1Q14019 142 aa8.54□□□□□ -1.04
VRK3-203ENST00000424804 NUP35Q8NFH5 326 aa8.54□□□□□ -1.04
VRK3-203ENST00000424804 NAT8BQ9UHF3 227 aa8.54□□□□□ -1.04
VRK3-203ENST00000424804 FAM231BA6NCW3 169 aa8.53□□□□□ -1.04
VRK3-203ENST00000424804 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
VRK3-203ENST00000424804 TMEM243Q9BU79 118 aa8.53□□□□□ -1.04
VRK3-203ENST00000424804 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.04
VRK3-203ENST00000424804 CAMPP49913 170 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
VRK3-203ENST00000424804 RBX1P62877 108 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 Q0VG73 95 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 IQCJQ1A5X6 159 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 AMN1Q8IY45 258 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 TMEM191AQ9H0A3 160 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 COX11Q9Y6N1 276 aa8.52□□□□□ -1.05
VRK3-203ENST00000424804 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.51□□□□□ -1.05
VRK3-203ENST00000424804 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
VRK3-203ENST00000424804 SMKR1H3BMG3 65 aa8.51□□□□□ -1.05
VRK3-203ENST00000424804 GAS8-AS1O95177 125 aa8.51□□□□□ -1.05
VRK3-203ENST00000424804 NCR2O95944 276 aa8.51□□□□□ -1.05
VRK3-203ENST00000424804 PMCHP20382 165 aa8.51□□□□□ -1.05
VRK3-203ENST00000424804 HLA-DQA1P01909 254 aa8.5□□□□□ -1.05
VRK3-203ENST00000424804 CLLU1Q5K131 121 aa8.5□□□□□ -1.05
VRK3-203ENST00000424804 MRPL54Q6P161 138 aaKnown RBP8.5□□□□□ -1.05
VRK3-203ENST00000424804 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
VRK3-203ENST00000424804 LINC00269Q8N2A0 174 aa8.5□□□□□ -1.05
VRK3-203ENST00000424804 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
VRK3-203ENST00000424804 APCSP02743 223 aa8.49□□□□□ -1.05
VRK3-203ENST00000424804 RAB4AP20338 218 aa8.49□□□□□ -1.05
VRK3-203ENST00000424804 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
VRK3-203ENST00000424804 AMMECR1LQ6DCA0 310 aa8.49□□□□□ -1.05
VRK3-203ENST00000424804 RNF185Q96GF1 192 aa8.49□□□□□ -1.05
VRK3-203ENST00000424804 ST20Q9HBF5 79 aa8.49□□□□□ -1.05
VRK3-203ENST00000424804 IGLV10-54A0A075B6I4 117 aa8.48□□□□□ -1.05
VRK3-203ENST00000424804 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.48□□□□□ -1.05
VRK3-203ENST00000424804 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
VRK3-203ENST00000424804 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
VRK3-203ENST00000424804 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
VRK3-203ENST00000424804 IFITM2Q01629 132 aa8.48□□□□□ -1.05
VRK3-203ENST00000424804 RNASEKQ6P5S7 137 aaKnown RBP8.48□□□□□ -1.05
VRK3-203ENST00000424804 IGLV4-60A0A075B6I1 120 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 I3L3M4 83 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
VRK3-203ENST00000424804 REG3AQ06141 175 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 MIAQ16674 131 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 LINC00528Q8N1L1 170 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 TMEM242Q9NWH2 141 aa8.47□□□□□ -1.05
VRK3-203ENST00000424804 PPP1R2P9O14990 202 aa8.46□□□□□ -1.06
VRK3-203ENST00000424804 MRPL51Q4U2R6 128 aaKnown RBP8.46□□□□□ -1.06
VRK3-203ENST00000424804 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
VRK3-203ENST00000424804 FCER1GP30273 86 aa8.45□□□□□ -1.06
VRK3-203ENST00000424804 CKS2P33552 79 aa8.45□□□□□ -1.06
VRK3-203ENST00000424804 HBBP68871 147 aa8.45□□□□□ -1.06
VRK3-203ENST00000424804 PNRC1Q12796 327 aaPredicted RBP8.45□□□□□ -1.06
VRK3-203ENST00000424804 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
VRK3-203ENST00000424804 SCXQ7RTU7 201 aa8.45□□□□□ -1.06
VRK3-203ENST00000424804 A0A1B0GW15 77 aa8.44□□□□□ -1.06
VRK3-203ENST00000424804 F8W036 122 aa8.44□□□□□ -1.06
VRK3-203ENST00000424804 MT-ND4LP03901 98 aa8.44□□□□□ -1.06
VRK3-203ENST00000424804 S100A8P05109 93 aa8.44□□□□□ -1.06
VRK3-203ENST00000424804 A0A1B0GUV1 79 aa8.43□□□□□ -1.06
VRK3-203ENST00000424804 TSHBP01222 138 aa8.43□□□□□ -1.06
VRK3-203ENST00000424804 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
VRK3-203ENST00000424804 FGF6P10767 208 aa8.43□□□□□ -1.06
VRK3-203ENST00000424804 TMEM101Q96IK0 257 aa8.43□□□□□ -1.06
VRK3-203ENST00000424804 BTF3L4Q96K17 158 aa8.43□□□□□ -1.06
VRK3-203ENST00000424804 PRR34Q9NV39 138 aa8.43□□□□□ -1.06
VRK3-203ENST00000424804 USP17L23D6RBM5 183 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 J3QL48 77 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 VCYO14598 125 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 PPP1R17O96001 155 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 POLR2KP53803 58 aaKnown RBP8.42□□□□□ -1.06
VRK3-203ENST00000424804 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
VRK3-203ENST00000424804 COMMD7Q86VX2 200 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 NRACQ8N912 160 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
VRK3-203ENST00000424804 ANAPC16Q96DE5 110 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms