RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 PHLDA1Q8WV24 401 aaPredicted RBP4.96□□□□□ -1.62
EPHA4-206ENST00000424339 UQCR10Q9UDW1 63 aa4.96□□□□□ -1.62
EPHA4-206ENST00000424339 PRO0255Q9UI72 69 aa4.96□□□□□ -1.62
EPHA4-206ENST00000424339 DNAH9Q9NYC9 4486 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 TRAV9-2A0A087WT02 112 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 TRGV4A0A0C4DH28 118 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 IGHV1-24A0A0C4DH33 117 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 TRBV6-4A0A1B0GX49 114 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 H7C1H1 209 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 TCAPO15273 167 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 TWIST1Q15672 202 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 GAGE13Q4V321 117 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 CEMP1Q6PRD7 247 aaPredicted RBP4.95□□□□□ -1.62
EPHA4-206ENST00000424339 SH2D6Q7Z4S9 175 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 SPATA12Q7Z6I5 190 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 C15orf53Q8NAA6 179 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 DPH3P1Q9H4G8 78 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 TENM3Q9P273 2699 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 STAB2Q8WWQ8 2551 aa4.95□□□□□ -1.62
EPHA4-206ENST00000424339 HUWE1Q7Z6Z7 4374 aaKnown RBP4.95□□□□□ -1.62
EPHA4-206ENST00000424339 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 TRBV10-1A0A0K0K1A3 114 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 F5H768 121 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 CRYGDP07320 174 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 RHOHQ15669 191 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 Q6ZSN1 163 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 POM121L12Q8N7R1 296 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 PRADC1Q9BSG0 188 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 TMEM70Q9BUB7 260 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 TMEM191AQ9H0A3 160 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 HHLA3Q9XRX5 114 aa4.94□□□□□ -1.62
EPHA4-206ENST00000424339 MRPS16Q9Y3D3 137 aaKnown RBP4.94□□□□□ -1.62
EPHA4-206ENST00000424339 NACAE9PAV3 2078 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 SYS1-DBNDD2H3BUS1 97 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 PPP1R17O96001 155 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 IGHV3-53P01767 116 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 LINC00614P0C842 121 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 HTN3P15516 51 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 GATA1P15976 413 aaPredicted RBP4.93□□□□□ -1.62
EPHA4-206ENST00000424339 HNRNPA3P51991 378 aaKnown RBP4.93□□□□□ -1.62
EPHA4-206ENST00000424339 GAGE1Q13065 139 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 FAM74A4Q5TZK3 123 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 UFSP1Q6NVU6 142 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 LINC00173Q6ZV60 143 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 ZNF479Q96JC4 524 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 ST20Q9HBF5 79 aa4.93□□□□□ -1.62
EPHA4-206ENST00000424339 TRAV26-1A0A087WT03 109 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 B5MCH6 92 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 K7EQD1 137 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 EVI2AP22794 236 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 CRYBA4P53673 196 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 ZNF56Q15929 161 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 MRPL23Q16540 153 aaKnown RBP4.92□□□□□ -1.62
EPHA4-206ENST00000424339 COL5A1-AS1Q5SY13 56 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 DGAT2L7PQ6IED9 249 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 PET117Q6UWS5 81 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 Q6ZN92 141 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 ATOH7Q8N100 152 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 C14orf178Q8N769 122 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-206ENST00000424339 MRAP2Q96G30 205 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 KIF25-AS1Q9Y6Z4 181 aa4.92□□□□□ -1.62
EPHA4-206ENST00000424339 MUC21A0A0G2JKD1 596 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 MUC21A0A140T8X8 626 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 IGLL5B9A064 214 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 F5H697 171 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 PPBPP02775 128 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 RPL36AP83881 106 aaKnown RBP4.91□□□□□ -1.62
EPHA4-206ENST00000424339 MAJINQ3KP22 176 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 LINC01545Q5VT33 79 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 FAM104BQ5XKR9 115 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 SLC25A29Q8N8R3 303 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
EPHA4-206ENST00000424339 DNAJC30Q96LL9 226 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 JPT2Q9H910 190 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 MSRB1Q9NZV6 116 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 HSPB8Q9UJY1 196 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 LAMTOR2Q9Y2Q5 125 aa4.91□□□□□ -1.62
EPHA4-206ENST00000424339 A0A096LNJ9 63 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 LINC01546A6NGU7 62 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
EPHA4-206ENST00000424339 DLEU1O43261 78 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 MGPP08493 103 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 TIRAPP58753 221 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 LINC00315P59091 139 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 TMEM97Q5BJF2 176 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 CASC10Q5T4H9 136 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 FA2HQ7L5A8 372 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 NEGR1Q7Z3B1 354 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 STPG4Q8N801 248 aa4.9□□□□□ -1.63
EPHA4-206ENST00000424339 TRBV7-3A0A075B6L6 115 aa4.89□□□□□ -1.63
EPHA4-206ENST00000424339 IGHV3-73A0A0B4J1V6 119 aa4.89□□□□□ -1.63
EPHA4-206ENST00000424339 M0QY20 66 aa4.89□□□□□ -1.63
EPHA4-206ENST00000424339 P0DMU3 169 aa4.89□□□□□ -1.63
EPHA4-206ENST00000424339 FAM231AP0DMU4 169 aa4.89□□□□□ -1.63
EPHA4-206ENST00000424339 FAM231CP0DMU5 169 aa4.89□□□□□ -1.63
EPHA4-206ENST00000424339 ZNF25P17030 456 aaPredicted RBP4.89□□□□□ -1.63
EPHA4-206ENST00000424339 G0S2P27469 103 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms