RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
PTPRN-204ENST00000423636 POM121L12Q8N7R1 296 aa8.66□□□□□ -1.02
PTPRN-204ENST00000423636 MYMXA0A1B0GTQ4 84 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 INAFM1C9JVW0 142 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 CEND1Q8N111 149 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 A0A096LPF7 62 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 GAGE7O76087 117 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 GAGE12FP0CL80 117 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 GAGE12GP0CL81 117 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 GAGE12IP0CL82 117 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 DAND5Q8N907 189 aa8.65□□□□□ -1.02
PTPRN-204ENST00000423636 C9orf118A6NHY6 69 aa8.65□□□□□ -1.03
PTPRN-204ENST00000423636 PMVKQ15126 192 aa8.65□□□□□ -1.03
PTPRN-204ENST00000423636 CFAP126Q5VTH2 177 aa8.65□□□□□ -1.03
PTPRN-204ENST00000423636 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.03
PTPRN-204ENST00000423636 COL6A5A8TX70 2615 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 TRGV11A0A075B6L2 103 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 GAGE12JA6NER3 117 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 H3BMG7 143 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 RPL24P83731 157 aaKnown RBP8.64□□□□□ -1.03
PTPRN-204ENST00000423636 GAGE4Q13068 117 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 GAGE5Q13069 117 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 GAGE13Q4V321 117 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 NXPH4O95158 308 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 SEC11AP67812 179 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 LINC00482Q8N8I6 264 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 VCX2Q9H322 139 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 TRPT1Q86TN4 253 aaKnown RBP8.64□□□□□ -1.03
PTPRN-204ENST00000423636 LRRC75A-AS1Q8N1F1 130 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 LINC00467Q9BRT7 94 aa8.64□□□□□ -1.03
PTPRN-204ENST00000423636 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 I3L3M4 83 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 KRTAP10-3P60369 221 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 PRSS47A8MTI9 375 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 DEFB130BP0DP73 79 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 DEFB130AP0DP74 79 aa8.63□□□□□ -1.03
PTPRN-204ENST00000423636 M0R2P5 195 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 INSP01308 110 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 RNF152Q8N8N0 203 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 A0A1W2PPM0 123 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 H3BRM9 83 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 PRSS2P07478 247 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 C12orf74Q32Q52 190 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 Q8N2B8 174 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 C20orf203Q8NBC4 194 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 LY6G6DO95868 133 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 Q6ZUT4 128 aa8.62□□□□□ -1.03
PTPRN-204ENST00000423636 IGLV4-3A0A075B6K6 122 aa8.61□□□□□ -1.03
PTPRN-204ENST00000423636 TRAV13-1A0A0B4J241 112 aa8.61□□□□□ -1.03
PTPRN-204ENST00000423636 LINC01549A6NIU2 74 aa8.61□□□□□ -1.03
PTPRN-204ENST00000423636 LINC00694P0DN24 101 aa8.61□□□□□ -1.03
PTPRN-204ENST00000423636 TRGV2A0A075B6R0 118 aa8.61□□□□□ -1.03
PTPRN-204ENST00000423636 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
PTPRN-204ENST00000423636 C11orf72Q8NBR9 251 aa8.61□□□□□ -1.03
PTPRN-204ENST00000423636 TRBV7-9A0A0J9YWB2 115 aa8.6□□□□□ -1.03
PTPRN-204ENST00000423636 FABP2P12104 132 aa8.6□□□□□ -1.03
PTPRN-204ENST00000423636 SH2D6Q7Z4S9 175 aa8.6□□□□□ -1.03
PTPRN-204ENST00000423636 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
PTPRN-204ENST00000423636 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
PTPRN-204ENST00000423636 E9PLD3 99 aa8.59□□□□□ -1.03
PTPRN-204ENST00000423636 PF4P02776 101 aa8.59□□□□□ -1.03
PTPRN-204ENST00000423636 WFDC2Q14508 124 aa8.59□□□□□ -1.03
PTPRN-204ENST00000423636 DGAT2L7PQ6IED9 249 aa8.59□□□□□ -1.03
PTPRN-204ENST00000423636 TSSC4Q9Y5U2 329 aaPredicted RBP8.59□□□□□ -1.03
PTPRN-204ENST00000423636 PPP1R17O96001 155 aa8.59□□□□□ -1.03
PTPRN-204ENST00000423636 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
PTPRN-204ENST00000423636 J3QQQ9 107 aa8.59□□□□□ -1.04
PTPRN-204ENST00000423636 ZNF418Q8TF45 676 aaPredicted RBP8.59□□□□□ -1.04
PTPRN-204ENST00000423636 IGLL5B9A064 214 aa8.58□□□□□ -1.04
PTPRN-204ENST00000423636 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
PTPRN-204ENST00000423636 FAM104AQ969W3 186 aa8.58□□□□□ -1.04
PTPRN-204ENST00000423636 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
PTPRN-204ENST00000423636 RBX1P62877 108 aa8.58□□□□□ -1.04
PTPRN-204ENST00000423636 OCIAD2Q56VL3 154 aa8.58□□□□□ -1.04
PTPRN-204ENST00000423636 TRBV7-3A0A075B6L6 115 aa8.57□□□□□ -1.04
PTPRN-204ENST00000423636 SIVA1O15304 175 aa8.57□□□□□ -1.04
PTPRN-204ENST00000423636 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
PTPRN-204ENST00000423636 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
PTPRN-204ENST00000423636 SLC25A29Q8N8R3 303 aa8.57□□□□□ -1.04
PTPRN-204ENST00000423636 ODF3Q96PU9 254 aa8.57□□□□□ -1.04
PTPRN-204ENST00000423636 K7EP34 96 aa8.57□□□□□ -1.04
PTPRN-204ENST00000423636 EIF4EBP3O60516 100 aaPredicted RBP8.57□□□□□ -1.04
PTPRN-204ENST00000423636 COX6A2Q02221 97 aa8.57□□□□□ -1.04
PTPRN-204ENST00000423636 PTH2Q96A98 100 aa8.57□□□□□ -1.04
PTPRN-204ENST00000423636 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
PTPRN-204ENST00000423636 TENM3Q9P273 2699 aa8.56□□□□□ -1.04
PTPRN-204ENST00000423636 A0A0J9YY99 117 aa8.56□□□□□ -1.04
PTPRN-204ENST00000423636 PSMB2P49721 201 aa8.56□□□□□ -1.04
PTPRN-204ENST00000423636 GTF2H5Q6ZYL4 71 aa8.56□□□□□ -1.04
PTPRN-204ENST00000423636 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
PTPRN-204ENST00000423636 A8MWV9 139 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 K7ERU9 68 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 HERVK_113P61574 105 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 ETDBQ3ZM63 59 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
PTPRN-204ENST00000423636 C11orf68Q9H3H3 251 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms