RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 CHCHD10Q8WYQ3 142 aaPredicted RBP10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 MAP1LC3BQ9GZQ8 125 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 MED28Q9H204 178 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
CHCHD3-202ENST00000423635 IGKV3OR2-268A0A0C4DH90 116 aa10.25□□□□□ -0.77
CHCHD3-202ENST00000423635 AMTP48728 403 aa10.25□□□□□ -0.77
CHCHD3-202ENST00000423635 PSORS1C2Q9UIG4 136 aa10.25□□□□□ -0.77
CHCHD3-202ENST00000423635 FOXI1Q12951 378 aa10.24□□□□□ -0.77
CHCHD3-202ENST00000423635 COTL1Q14019 142 aa10.24□□□□□ -0.77
CHCHD3-202ENST00000423635 Q5BKY6 102 aa10.24□□□□□ -0.77
CHCHD3-202ENST00000423635 PAGE4O60829 102 aa10.23□□□□□ -0.77
CHCHD3-202ENST00000423635 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
CHCHD3-202ENST00000423635 A0A0U1RQV1 116 aa10.22□□□□□ -0.77
CHCHD3-202ENST00000423635 SCO2A0A1W2PP80 73 aa10.21□□□□□ -0.78
CHCHD3-202ENST00000423635 CACNG7P62955 275 aa10.21□□□□□ -0.78
CHCHD3-202ENST00000423635 CARD19Q96LW7 228 aa10.21□□□□□ -0.78
CHCHD3-202ENST00000423635 KRTAP9-6A0A140TA67 174 aa10.2□□□□□ -0.78
CHCHD3-202ENST00000423635 PTTG1IPP53801 180 aa10.2□□□□□ -0.78
CHCHD3-202ENST00000423635 DEFA1P59665 94 aa10.2□□□□□ -0.78
CHCHD3-202ENST00000423635 TMUB2Q71RG4 321 aa10.2□□□□□ -0.78
CHCHD3-202ENST00000423635 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
CHCHD3-202ENST00000423635 ALG5Q9Y673 324 aa10.2□□□□□ -0.78
CHCHD3-202ENST00000423635 IGHV1-58A0A0C4DH39 117 aa10.19□□□□□ -0.78
CHCHD3-202ENST00000423635 H7C423 109 aa10.19□□□□□ -0.78
CHCHD3-202ENST00000423635 LINC00526Q96FQ7 95 aa10.19□□□□□ -0.78
CHCHD3-202ENST00000423635 TPPP3Q9BW30 176 aa10.19□□□□□ -0.78
CHCHD3-202ENST00000423635 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
CHCHD3-202ENST00000423635 A0A1W2PNN7 141 aa10.18□□□□□ -0.78
CHCHD3-202ENST00000423635 NTF3P20783 257 aa10.18□□□□□ -0.78
CHCHD3-202ENST00000423635 RPS20P60866 119 aaKnown RBP10.18□□□□□ -0.78
CHCHD3-202ENST00000423635 AMMECR1LQ6DCA0 310 aa10.18□□□□□ -0.78
CHCHD3-202ENST00000423635 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
CHCHD3-202ENST00000423635 F2Z2F3 143 aa10.17□□□□□ -0.78
CHCHD3-202ENST00000423635 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
CHCHD3-202ENST00000423635 SYCNQ0VAF6 134 aa10.17□□□□□ -0.78
CHCHD3-202ENST00000423635 LCE2AQ5TA79 106 aaPredicted RBP10.17□□□□□ -0.78
CHCHD3-202ENST00000423635 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
CHCHD3-202ENST00000423635 NCR2O95944 276 aa10.16□□□□□ -0.78
CHCHD3-202ENST00000423635 RNASEKQ6P5S7 137 aaKnown RBP10.16□□□□□ -0.78
CHCHD3-202ENST00000423635 MBD3L1Q8WWY6 194 aa10.16□□□□□ -0.78
CHCHD3-202ENST00000423635 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 PFDN1O60925 122 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 MT-ND6P03923 174 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 GIPP09681 153 aaPredicted RBP10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 FGF6P10767 208 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 XCL1P47992 114 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 Q6ZNX1 250 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 OR2D3Q8NGH3 330 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 CYTL1Q9NRR1 136 aa10.15□□□□□ -0.78
CHCHD3-202ENST00000423635 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 IGKV2-29A2NJV5 120 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 ZNF561-AS1K7EIQ3 104 aa10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 CCL25O15444 150 aa10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 ZNF25P17030 456 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 RPL35P42766 123 aaKnown RBP10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 GAGE2BQ13066 116 aa10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
CHCHD3-202ENST00000423635 FXYD6-FXYD2A0A087WZ82 144 aa10.13□□□□□ -0.79
CHCHD3-202ENST00000423635 LYZL1Q6UWQ5 148 aa10.13□□□□□ -0.79
CHCHD3-202ENST00000423635 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
CHCHD3-202ENST00000423635 DIRC1Q969H9 104 aa10.13□□□□□ -0.79
CHCHD3-202ENST00000423635 C9orf116Q5BN46 136 aaPredicted RBP10.12□□□□□ -0.79
CHCHD3-202ENST00000423635 C9orf62Q8N4C0 152 aa10.12□□□□□ -0.79
CHCHD3-202ENST00000423635 ISOC2Q96AB3 205 aa10.12□□□□□ -0.79
CHCHD3-202ENST00000423635 XKRY2A2RUG3 117 aa10.11□□□□□ -0.79
CHCHD3-202ENST00000423635 APCSP02743 223 aa10.11□□□□□ -0.79
CHCHD3-202ENST00000423635 CAMPP49913 170 aa10.11□□□□□ -0.79
CHCHD3-202ENST00000423635 CD164L2Q6UWJ8 174 aa10.11□□□□□ -0.79
CHCHD3-202ENST00000423635 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
CHCHD3-202ENST00000423635 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
CHCHD3-202ENST00000423635 PRR4Q16378 134 aa10.1□□□□□ -0.79
CHCHD3-202ENST00000423635 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
CHCHD3-202ENST00000423635 IGLV4-69A0A075B6H9 119 aa10.09□□□□□ -0.79
CHCHD3-202ENST00000423635 PHF5AQ7RTV0 110 aaKnown RBP10.09□□□□□ -0.79
CHCHD3-202ENST00000423635 KCNRGQ8N5I3 272 aa10.09□□□□□ -0.79
CHCHD3-202ENST00000423635 C11orf52Q96A22 123 aa10.09□□□□□ -0.79
CHCHD3-202ENST00000423635 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
CHCHD3-202ENST00000423635 BTF3L4Q96K17 158 aa10.09□□□□□ -0.79
CHCHD3-202ENST00000423635 CNFNQ9BYD5 112 aa10.09□□□□□ -0.79
CHCHD3-202ENST00000423635 A0A1B0GV50 99 aa10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 H0Y9J4 135 aa10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 IFNA1P01562 189 aa10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 BCL2P10415 239 aa10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 SS18Q15532 418 aa10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 CENPWQ5EE01 88 aa10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 RPL39LQ96EH5 51 aaKnown RBP10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 SMIM12Q96EX1 92 aa10.08□□□□□ -0.8
CHCHD3-202ENST00000423635 UMAD1C9J7I0 102 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 APOMO95445 188 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 CTRLP40313 264 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 MEF2BQ02080 365 aaPredicted RBP10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 TWIST1Q15672 202 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 FAM213BQ8TBF2 198 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 SDHAF1A6NFY7 115 aa10.07□□□□□ -0.8
CHCHD3-202ENST00000423635 G3V3Q6 166 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms