RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
USB1-202ENST00000423271 CAMPP49913 170 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 C10orf91Q5T1B1 145 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 MRPL54Q6P161 138 aaKnown RBP10.03□□□□□ -0.8
USB1-202ENST00000423271 AMN1Q8IY45 258 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 BAALCQ8WXS3 180 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 FRZBQ92765 325 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 RNF185Q96GF1 192 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 TMEM70Q9BUB7 260 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
USB1-202ENST00000423271 UBE2WQ96B02 151 aa10.02□□□□□ -0.81
USB1-202ENST00000423271 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.81
USB1-202ENST00000423271 CARHSP1Q9Y2V2 147 aaKnown RBP10.02□□□□□ -0.81
USB1-202ENST00000423271 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.01□□□□□ -0.81
USB1-202ENST00000423271 IGKV2D-24A0A075B6R9 120 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 A0A087WX48 190 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 A0A1B0GW15 77 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 A0A1B0GXF2 115 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 A6NJY4 79 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 RAB4AP20338 218 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
USB1-202ENST00000423271 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
USB1-202ENST00000423271 GAS8-AS1O95177 125 aa10□□□□□ -0.81
USB1-202ENST00000423271 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
USB1-202ENST00000423271 HBBP68871 147 aa10□□□□□ -0.81
USB1-202ENST00000423271 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
USB1-202ENST00000423271 SREK1IP1Q8N9Q2 155 aaPredicted RBP10□□□□□ -0.81
USB1-202ENST00000423271 RMI2Q96E14 147 aa10□□□□□ -0.81
USB1-202ENST00000423271 MPV17L2Q567V2 206 aa9.99□□□□□ -0.81
USB1-202ENST00000423271 KCNIP4Q6PIL6 250 aa9.99□□□□□ -0.81
USB1-202ENST00000423271 ATP5L2Q7Z4Y8 100 aa9.99□□□□□ -0.81
USB1-202ENST00000423271 CTDSP1Q9GZU7 261 aa9.99□□□□□ -0.81
USB1-202ENST00000423271 COX11Q9Y6N1 276 aa9.99□□□□□ -0.81
USB1-202ENST00000423271 SRRM2Q9UQ35 2752 aaKnown RBP9.99□□□□□ -0.81
USB1-202ENST00000423271 TMEM262E9PQX1 116 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 SMKR1H3BMG3 65 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 NCR2O95944 276 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 S100A8P05109 93 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 ELOBQ15370 118 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 LINC01620Q4KN68 170 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 CLRN3Q8NCR9 226 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 DEFB104AQ8WTQ1 72 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 MRAP2Q96G30 205 aa9.98□□□□□ -0.81
USB1-202ENST00000423271 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
USB1-202ENST00000423271 C7orf77A4D0Y5 90 aa9.97□□□□□ -0.81
USB1-202ENST00000423271 RPS10P46783 165 aaKnown RBP9.97□□□□□ -0.81
USB1-202ENST00000423271 MRPL51Q4U2R6 128 aaKnown RBP9.97□□□□□ -0.81
USB1-202ENST00000423271 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
USB1-202ENST00000423271 ATRAIDQ6UW56 229 aa9.97□□□□□ -0.81
USB1-202ENST00000423271 ENHOQ6UWT2 76 aa9.97□□□□□ -0.81
USB1-202ENST00000423271 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.82
USB1-202ENST00000423271 RHEBQ15382 184 aa9.96□□□□□ -0.82
USB1-202ENST00000423271 Q6ZSA8 131 aa9.96□□□□□ -0.82
USB1-202ENST00000423271 BTF3L4Q96K17 158 aa9.96□□□□□ -0.82
USB1-202ENST00000423271 IMMP2LQ96T52 175 aa9.96□□□□□ -0.82
USB1-202ENST00000423271 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.82
USB1-202ENST00000423271 TRBV25-1A0A075B6N4 114 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 IGHV1-24A0A0C4DH33 117 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 TRBV6-5A0A0K0K1A5 114 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 APOC3P02656 99 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 NRACQ8N912 160 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 Q8N976 141 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 ST20Q9HBF5 79 aa9.95□□□□□ -0.82
USB1-202ENST00000423271 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 CRPP02741 224 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 ANGP03950 147 aaKnown RBP9.94□□□□□ -0.82
USB1-202ENST00000423271 Q0VG73 95 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 COTL1Q14019 142 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 RPS10P5Q9NQ39 176 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 TMEM242Q9NWH2 141 aa9.94□□□□□ -0.82
USB1-202ENST00000423271 CKS2P33552 79 aa9.93□□□□□ -0.82
USB1-202ENST00000423271 GAGE6Q13070 117 aa9.93□□□□□ -0.82
USB1-202ENST00000423271 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
USB1-202ENST00000423271 D6R8Y8 96 aa9.92□□□□□ -0.82
USB1-202ENST00000423271 AMTP48728 403 aa9.92□□□□□ -0.82
USB1-202ENST00000423271 POLR2KP53803 58 aaKnown RBP9.92□□□□□ -0.82
USB1-202ENST00000423271 RBX1P62877 108 aa9.92□□□□□ -0.82
USB1-202ENST00000423271 CLPSL2Q6UWE3 100 aa9.92□□□□□ -0.82
USB1-202ENST00000423271 TMEM243Q9BU79 118 aa9.92□□□□□ -0.82
USB1-202ENST00000423271 PKHD1L1Q86WI1 4243 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 TRAV9-1A0A075B6T8 112 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 I3L3M4 83 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 SNAPINO95295 136 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 PPP1R17O96001 155 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 PMCHP20382 165 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 S100PP25815 95 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 PKIAP61925 76 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 SVBPQ8N300 66 aa9.91□□□□□ -0.82
USB1-202ENST00000423271 TRBV27A0A0K0K1C4 114 aa9.9□□□□□ -0.82
USB1-202ENST00000423271 TSHBP01222 138 aa9.9□□□□□ -0.82
USB1-202ENST00000423271 NPYP01303 97 aa9.9□□□□□ -0.82
USB1-202ENST00000423271 HLA-DQA1P01909 254 aa9.9□□□□□ -0.82
USB1-202ENST00000423271 SUMO2P61956 95 aaKnown RBP9.9□□□□□ -0.82
USB1-202ENST00000423271 TMEM136Q6ZRR5 245 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms