RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 KIR2DL4Q99706 377 aa6.84□□□□□ -1.31
ECHDC3-203ENST00000422887 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
ECHDC3-203ENST00000422887 Q9H8V8 135 aa6.84□□□□□ -1.31
ECHDC3-203ENST00000422887 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
ECHDC3-203ENST00000422887 PRSS47A8MTI9 375 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 GAS8-AS1O95177 125 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 NPYP01303 97 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 DNAH10OSP0CZ25 163 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 PMCHP20382 165 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 C10orf126Q8N4M7 172 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 SMIM2Q9BVW6 85 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 MAP1LC3AQ9H492 121 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 TRAPPC1Q9Y5R8 145 aa6.83□□□□□ -1.32
ECHDC3-203ENST00000422887 TRAV9-2A0A087WT02 112 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 H7C423 109 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 K7EMI3 77 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 AMTP48728 403 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 FABP9Q0Z7S8 132 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 WFDC10BQ8IUB3 73 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 PKD1P98161 4303 aa6.82□□□□□ -1.32
ECHDC3-203ENST00000422887 DNAH11Q96DT5 4516 aa6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 UBE2L6O14933 153 aa6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 FCER1GP30273 86 aa6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 SMAGPQ0VAQ4 97 aa6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 NTM-AS1Q6ZSK4 140 aa6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 NIT1Q86X76 327 aa6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 NXT2Q9NPJ8 142 aaKnown RBP6.81□□□□□ -1.32
ECHDC3-203ENST00000422887 A0A087WX48 190 aa6.8□□□□□ -1.32
ECHDC3-203ENST00000422887 NBDYA0A0U1RRE5 68 aa6.8□□□□□ -1.32
ECHDC3-203ENST00000422887 TSHBP01222 138 aa6.8□□□□□ -1.32
ECHDC3-203ENST00000422887 KIAA1644Q3SXP7 199 aa6.8□□□□□ -1.32
ECHDC3-203ENST00000422887 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
ECHDC3-203ENST00000422887 COLCA2A8K830 154 aa6.79□□□□□ -1.32
ECHDC3-203ENST00000422887 ESDP10768 282 aa6.79□□□□□ -1.32
ECHDC3-203ENST00000422887 RAB5AP20339 215 aa6.79□□□□□ -1.32
ECHDC3-203ENST00000422887 LAGE3Q14657 143 aa6.79□□□□□ -1.32
ECHDC3-203ENST00000422887 Q8N8P6 123 aa6.79□□□□□ -1.32
ECHDC3-203ENST00000422887 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
ECHDC3-203ENST00000422887 IGLV2-18A0A075B6J9 118 aa6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 A0A1B0GUV1 79 aa6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 TMEM262E9PQX1 116 aa6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 SCO1O75880 301 aa6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 ZNF25P17030 456 aaPredicted RBP6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 G0S2P27469 103 aa6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 ORMDL2Q53FV1 153 aa6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 Q6ZR54 194 aa6.78□□□□□ -1.32
ECHDC3-203ENST00000422887 PKHD1P08F94 4074 aa6.77□□□□□ -1.33
ECHDC3-203ENST00000422887 LOC389332A0A1B0GUA5 103 aa6.77□□□□□ -1.33
ECHDC3-203ENST00000422887 GAGE6Q13070 117 aa6.77□□□□□ -1.33
ECHDC3-203ENST00000422887 MPV17L2Q567V2 206 aa6.77□□□□□ -1.33
ECHDC3-203ENST00000422887 LINC01549A6NIU2 74 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 IBA57-AS1B1ANH7 110 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 IGHV3-30P01768 117 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 IGHV3-33P01772 117 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 IGHV3-30-3P0DP02 117 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 IGHV3-30-5P0DP03 117 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 RBX1P62877 108 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 AMMECR1LQ6DCA0 310 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 MRPL52Q86TS9 123 aaKnown RBP6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 NFE4Q86UQ8 179 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 PRSS3P2Q8NHM4 247 aa6.76□□□□□ -1.33
ECHDC3-203ENST00000422887 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 TRAV8-3A0A0A6YYJ7 113 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 IGKV2-29A2NJV5 120 aaPredicted RBP6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 LINC01546A6NGU7 62 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 CRPP02741 224 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 TRGC2P03986 189 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 FGF6P10767 208 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 IFI27P40305 119 aaPredicted RBP6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 RAB5BP61020 215 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 Q0VG73 95 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 FA2HQ7L5A8 372 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 C18orf32Q8TCD1 76 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 TMEM101Q96IK0 257 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 TIMM21Q9BVV7 248 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 CSDC2Q9Y534 153 aaKnown RBP6.75□□□□□ -1.33
ECHDC3-203ENST00000422887 M0R2N4 97 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 ANGP03950 147 aaKnown RBP6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 C1orf134Q5TEV5 83 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 RNASEKQ6P5S7 137 aaKnown RBP6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 C6orf223Q8N319 242 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 Q8N976 141 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 OR5A1Q8NGJ0 315 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 RMI2Q96E14 147 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 UBE2D4Q9Y2X8 147 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 DNAH5Q8TE73 4624 aa6.74□□□□□ -1.33
ECHDC3-203ENST00000422887 NPSP0C0P6 89 aa6.73□□□□□ -1.33
ECHDC3-203ENST00000422887 MIAQ16674 131 aa6.73□□□□□ -1.33
ECHDC3-203ENST00000422887 DGAT2L7PQ6IED9 249 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms