RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 HIGD1CA8MV81 97 aa14.45□□□□□ -0.1
TRAF4-204ENST00000422344 UBE2L6O14933 153 aa14.45□□□□□ -0.1
TRAF4-204ENST00000422344 A0A1B0GUT8 65 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 FAM231BA6NCW3 169 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 AMTP48728 403 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 Q5VSD8 79 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 CLPSL2Q6UWE3 100 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 LINC00269Q8N2A0 174 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 DEFB104AQ8WTQ1 72 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 TMEM70Q9BUB7 260 aa14.44□□□□□ -0.1
TRAF4-204ENST00000422344 ADIRFQ15847 76 aa14.43□□□□□ -0.1
TRAF4-204ENST00000422344 ISOC2Q96AB3 205 aa14.43□□□□□ -0.1
TRAF4-204ENST00000422344 NAT8Q9UHE5 227 aa14.43□□□□□ -0.1
TRAF4-204ENST00000422344 MYCBP2O75592 4640 aa14.43□□□□□ -0.1
TRAF4-204ENST00000422344 FLG2Q5D862 2391 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-204ENST00000422344 HLA-DQA1P01909 254 aa14.42□□□□□ -0.1
TRAF4-204ENST00000422344 RPL39LQ96EH5 51 aaKnown RBP14.42□□□□□ -0.1
TRAF4-204ENST00000422344 SMDT1Q9H4I9 107 aa14.42□□□□□ -0.1
TRAF4-204ENST00000422344 SRRM2Q9UQ35 2752 aaKnown RBP14.41□□□□□ -0.1
TRAF4-204ENST00000422344 C9JQL5 133 aa14.41□□□□□ -0.1
TRAF4-204ENST00000422344 RPL23P62829 140 aaKnown RBP14.41□□□□□ -0.1
TRAF4-204ENST00000422344 C14orf177Q52M58 125 aa14.41□□□□□ -0.1
TRAF4-204ENST00000422344 PRR34Q9NV39 138 aa14.41□□□□□ -0.1
TRAF4-204ENST00000422344 V9GYV3 84 aa14.41□□□□□ -0.1
TRAF4-204ENST00000422344 A0A1B0GUV1 79 aa14.39□□□□□ -0.11
TRAF4-204ENST00000422344 SRSF3P84103 164 aaKnown RBP14.39□□□□□ -0.11
TRAF4-204ENST00000422344 REG3AQ06141 175 aa14.39□□□□□ -0.11
TRAF4-204ENST00000422344 RIGQ13278 110 aa14.39□□□□□ -0.11
TRAF4-204ENST00000422344 TMEM191AQ9H0A3 160 aa14.39□□□□□ -0.11
TRAF4-204ENST00000422344 SDHAF1A6NFY7 115 aa14.38□□□□□ -0.11
TRAF4-204ENST00000422344 NCR2O95944 276 aa14.38□□□□□ -0.11
TRAF4-204ENST00000422344 NAT8BQ9UHF3 227 aa14.38□□□□□ -0.11
TRAF4-204ENST00000422344 SMR3BP02814 79 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-204ENST00000422344 C20orf203Q8NBC4 194 aa14.37□□□□□ -0.11
TRAF4-204ENST00000422344 APCSP02743 223 aa14.36□□□□□ -0.11
TRAF4-204ENST00000422344 HAMPP81172 84 aa14.36□□□□□ -0.11
TRAF4-204ENST00000422344 NUP35Q8NFH5 326 aa14.36□□□□□ -0.11
TRAF4-204ENST00000422344 IGLV4-60A0A075B6I1 120 aa14.35□□□□□ -0.11
TRAF4-204ENST00000422344 IGLV10-54A0A075B6I4 117 aa14.35□□□□□ -0.11
TRAF4-204ENST00000422344 USP17L23D6RBM5 183 aa14.35□□□□□ -0.11
TRAF4-204ENST00000422344 PMCHP20382 165 aa14.35□□□□□ -0.11
TRAF4-204ENST00000422344 AMMECR1LQ6DCA0 310 aa14.35□□□□□ -0.11
TRAF4-204ENST00000422344 MRAP2Q96G30 205 aa14.35□□□□□ -0.11
TRAF4-204ENST00000422344 ST20Q9HBF5 79 aa14.35□□□□□ -0.11
TRAF4-204ENST00000422344 TRAV8-4A0A0B4J246 113 aa14.34□□□□□ -0.11
TRAF4-204ENST00000422344 TRBV6-5A0A0K0K1A5 114 aa14.34□□□□□ -0.11
TRAF4-204ENST00000422344 I3L3M4 83 aa14.34□□□□□ -0.11
TRAF4-204ENST00000422344 AMN1Q8IY45 258 aa14.34□□□□□ -0.11
TRAF4-204ENST00000422344 RAB4AP20338 218 aa14.33□□□□□ -0.12
TRAF4-204ENST00000422344 RAB14P61106 215 aa14.33□□□□□ -0.12
TRAF4-204ENST00000422344 LINC01620Q4KN68 170 aa14.33□□□□□ -0.12
TRAF4-204ENST00000422344 FAM30AQ9NZY2 134 aa14.33□□□□□ -0.12
TRAF4-204ENST00000422344 RNASEKQ6P5S7 137 aaKnown RBP14.32□□□□□ -0.12
TRAF4-204ENST00000422344 RNF185Q96GF1 192 aa14.32□□□□□ -0.12
TRAF4-204ENST00000422344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-204ENST00000422344 IGKV2-29A2NJV5 120 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-204ENST00000422344 H7C423 109 aa14.31□□□□□ -0.12
TRAF4-204ENST00000422344 SMIM27A0A1W2PRY6 76 aa14.3□□□□□ -0.12
TRAF4-204ENST00000422344 GAS8-AS1O95177 125 aa14.3□□□□□ -0.12
TRAF4-204ENST00000422344 KRTAP26-1Q6PEX3 210 aa14.3□□□□□ -0.12
TRAF4-204ENST00000422344 FAM229AH3BQW9 127 aa14.29□□□□□ -0.12
TRAF4-204ENST00000422344 PPP1R17O96001 155 aa14.29□□□□□ -0.12
TRAF4-204ENST00000422344 IGKV3OR2-268A0A0C4DH90 116 aa14.28□□□□□ -0.12
TRAF4-204ENST00000422344 A0A1B0GW15 77 aa14.28□□□□□ -0.12
TRAF4-204ENST00000422344 FGF6P10767 208 aa14.28□□□□□ -0.12
TRAF4-204ENST00000422344 RPS10P46783 165 aaKnown RBP14.28□□□□□ -0.12
TRAF4-204ENST00000422344 CAMPP49913 170 aa14.28□□□□□ -0.12
TRAF4-204ENST00000422344 Q6ZSA8 131 aa14.28□□□□□ -0.12
TRAF4-204ENST00000422344 BTF3L4Q96K17 158 aa14.28□□□□□ -0.12
TRAF4-204ENST00000422344 TMEM242Q9NWH2 141 aa14.28□□□□□ -0.12
TRAF4-204ENST00000422344 SMKR1H3BMG3 65 aa14.27□□□□□ -0.13
TRAF4-204ENST00000422344 PRSS1P07477 247 aa14.27□□□□□ -0.13
TRAF4-204ENST00000422344 TMEM101Q96IK0 257 aa14.27□□□□□ -0.13
TRAF4-204ENST00000422344 TSHBP01222 138 aa14.26□□□□□ -0.13
TRAF4-204ENST00000422344 ZNF25P17030 456 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-204ENST00000422344 CLRN3Q8NCR9 226 aa14.26□□□□□ -0.13
TRAF4-204ENST00000422344 S100A8P05109 93 aa14.25□□□□□ -0.13
TRAF4-204ENST00000422344 POLR2KP53803 58 aaKnown RBP14.25□□□□□ -0.13
TRAF4-204ENST00000422344 DGAT2L7PQ6IED9 249 aa14.25□□□□□ -0.13
TRAF4-204ENST00000422344 TRBV27A0A0K0K1C4 114 aa14.24□□□□□ -0.13
TRAF4-204ENST00000422344 VCYO14598 125 aa14.24□□□□□ -0.13
TRAF4-204ENST00000422344 FCER1GP30273 86 aa14.24□□□□□ -0.13
TRAF4-204ENST00000422344 FAM104BQ5XKR9 115 aa14.24□□□□□ -0.13
TRAF4-204ENST00000422344 hDV102S1A0JD36 115 aa14.23□□□□□ -0.13
TRAF4-204ENST00000422344 SUMO2P61956 95 aaKnown RBP14.23□□□□□ -0.13
TRAF4-204ENST00000422344 MRPL51Q4U2R6 128 aaKnown RBP14.23□□□□□ -0.13
TRAF4-204ENST00000422344 MRPL54Q6P161 138 aaKnown RBP14.23□□□□□ -0.13
TRAF4-204ENST00000422344 OR5A1Q8NGJ0 315 aa14.23□□□□□ -0.13
TRAF4-204ENST00000422344 GAGE12HA6NDE8 117 aa14.22□□□□□ -0.13
TRAF4-204ENST00000422344 F8W036 122 aa14.22□□□□□ -0.13
TRAF4-204ENST00000422344 PPP1R2P9O14990 202 aa14.22□□□□□ -0.13
TRAF4-204ENST00000422344 ESDP10768 282 aa14.22□□□□□ -0.13
TRAF4-204ENST00000422344 HBBP68871 147 aa14.22□□□□□ -0.13
TRAF4-204ENST00000422344 NRACQ8N912 160 aa14.22□□□□□ -0.13
TRAF4-204ENST00000422344 AP5S1Q9NUS5 200 aa14.22□□□□□ -0.13
TRAF4-204ENST00000422344 C7orf77A4D0Y5 90 aa14.21□□□□□ -0.13
TRAF4-204ENST00000422344 CKS2P33552 79 aa14.21□□□□□ -0.13
TRAF4-204ENST00000422344 SCXQ7RTU7 201 aa14.21□□□□□ -0.13
TRAF4-204ENST00000422344 KIR2DL4Q99706 377 aa14.21□□□□□ -0.13
TRAF4-204ENST00000422344 LINC00862A6NCI5 91 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms