RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GCSHP23434 173 aa6.36□□□□□ -1.39
SNCA-206ENST00000420646 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
SNCA-206ENST00000420646 GAGE12BA1L429 117 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 IGLV1-51P01701 117 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 ZNRF2Q8NHG8 242 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 ZNF479Q96JC4 524 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 IGLV4-69A0A075B6H9 119 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 K7ERJ3 54 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 PLNP26678 52 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 FXYD2P54710 66 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 UFSP1Q6NVU6 142 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 NOP10Q9NPE3 64 aaKnown RBP6.35□□□□□ -1.39
SNCA-206ENST00000420646 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
SNCA-206ENST00000420646 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
SNCA-206ENST00000420646 I3L3M4 83 aa6.34□□□□□ -1.39
SNCA-206ENST00000420646 TNFRSF18Q9Y5U5 241 aa6.34□□□□□ -1.39
SNCA-206ENST00000420646 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.34□□□□□ -1.39
SNCA-206ENST00000420646 IGKV2-29A2NJV5 120 aaPredicted RBP6.34□□□□□ -1.39
SNCA-206ENST00000420646 PF4P02776 101 aa6.34□□□□□ -1.39
SNCA-206ENST00000420646 TMEM170BQ5T4T1 132 aa6.34□□□□□ -1.39
SNCA-206ENST00000420646 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
SNCA-206ENST00000420646 CHAC1Q9BUX1 264 aa6.34□□□□□ -1.39
SNCA-206ENST00000420646 TRAV25A0A0B4J276 109 aa6.34□□□□□ -1.4
SNCA-206ENST00000420646 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
SNCA-206ENST00000420646 A8MWV9 139 aa6.33□□□□□ -1.4
SNCA-206ENST00000420646 PMVKQ15126 192 aa6.33□□□□□ -1.4
SNCA-206ENST00000420646 FAM104AQ969W3 186 aa6.33□□□□□ -1.4
SNCA-206ENST00000420646 ANK2Q01484 3957 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 PLEKHB2Q96CS7 222 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 TGP01266 2768 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 A0A0J9YXV3 536 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 GAGE7O76087 117 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 GAGE12FP0CL80 117 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 GAGE12GP0CL81 117 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 GAGE12IP0CL82 117 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 TSPEAR-AS2P59090 65 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 RPL32P62910 135 aaKnown RBP6.32□□□□□ -1.4
SNCA-206ENST00000420646 SCGB2A2Q13296 93 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 OR11H2Q8NH07 326 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 FBN3Q75N90 2809 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 NDUFA7O95182 113 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 HSD52Q0P140 79 aa6.32□□□□□ -1.4
SNCA-206ENST00000420646 LOC100131303A0A0U1RQF7 123 aa6.31□□□□□ -1.4
SNCA-206ENST00000420646 H3BUT2 72 aa6.31□□□□□ -1.4
SNCA-206ENST00000420646 BEAN1Q3B7T3 259 aa6.31□□□□□ -1.4
SNCA-206ENST00000420646 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
SNCA-206ENST00000420646 KRTAP21-3Q3LHN1 58 aa6.31□□□□□ -1.4
SNCA-206ENST00000420646 MDFIQ99750 246 aa6.31□□□□□ -1.4
SNCA-206ENST00000420646 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
SNCA-206ENST00000420646 NHP2Q9NX24 153 aaKnown RBP6.31□□□□□ -1.4
SNCA-206ENST00000420646 ZNF815PA8K554 130 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 TIMM17AQ99595 171 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 MYMXA0A1B0GTQ4 84 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 PLAC8L1A1L4L8 177 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 A8MZ25 164 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 SLC25A29Q8N8R3 303 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 VCX2Q9H322 139 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 DEFB4AO15263 64 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 SIVA1O15304 175 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 RS1O15537 224 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.3□□□□□ -1.4
SNCA-206ENST00000420646 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 HIST1H4GQ99525 98 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 SPXQ9BT56 116 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 CHCHD7Q9BUK0 85 aa6.3□□□□□ -1.4
SNCA-206ENST00000420646 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 E9PLD3 99 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 GAGE4Q13068 117 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 GAGE5Q13069 117 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 SCGB1D4Q6XE38 83 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 SEC11AP67812 179 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 RHOHQ15669 191 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 NDUFA11Q86Y39 141 aa6.29□□□□□ -1.4
SNCA-206ENST00000420646 TMEM263Q8WUH6 116 aaKnown RBP6.29□□□□□ -1.4
SNCA-206ENST00000420646 TRAV8-3A0A0A6YYJ7 113 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 DEFB130BP0DP73 79 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 DEFB130AP0DP74 79 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 Q6ZUT4 128 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 CEND1Q8N111 149 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 GTF2H5Q6ZYL4 71 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 IL17DQ8TAD2 202 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 GTSF1LQ9H1H1 148 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 G3V4G9 280 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 RRN3P1Q2M238 152 aa6.28□□□□□ -1.4
SNCA-206ENST00000420646 A6NDN8 102 aa6.27□□□□□ -1.41
SNCA-206ENST00000420646 CRLF1O75462 422 aa6.27□□□□□ -1.41
SNCA-206ENST00000420646 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
SNCA-206ENST00000420646 HIGD1BQ9P298 99 aa6.27□□□□□ -1.41
SNCA-206ENST00000420646 UBE2D4Q9Y2X8 147 aa6.27□□□□□ -1.41
SNCA-206ENST00000420646 RHODO00212 210 aa6.27□□□□□ -1.41
SNCA-206ENST00000420646 TRBV7-3A0A075B6L6 115 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms