RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 CHCHD10Q8WYQ3 142 aaPredicted RBP6.24□□□□□ -1.41
RAPGEF1-205ENST00000419442 TMSB15BA0A087X1C1 80 aa6.23□□□□□ -1.41
RAPGEF1-205ENST00000419442 F5H697 171 aa6.23□□□□□ -1.41
RAPGEF1-205ENST00000419442 CDC34P49427 236 aaPredicted RBP6.23□□□□□ -1.41
RAPGEF1-205ENST00000419442 UBE2D1P51668 147 aa6.23□□□□□ -1.41
RAPGEF1-205ENST00000419442 FOXI1Q12951 378 aa6.23□□□□□ -1.41
RAPGEF1-205ENST00000419442 ZNF471Q9BX82 626 aaPredicted RBP6.23□□□□□ -1.41
RAPGEF1-205ENST00000419442 HSPB11Q9Y547 144 aa6.23□□□□□ -1.41
RAPGEF1-205ENST00000419442 LOC107984640A0A0U1RRK4 108 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 A0A1W2PRE2 83 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 M0QY20 66 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 SNAI2O43623 268 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 CXCL1P09341 107 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 RPL12P30050 165 aaKnown RBP6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 NKX2-5P52952 324 aaPredicted RBP6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 C9orf116Q5BN46 136 aaPredicted RBP6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 PHF5AQ7RTV0 110 aaKnown RBP6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 NUDT10Q8NFP7 164 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 NUDT11Q96G61 164 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 PGLYRP4Q96LB8 373 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 TMEM167BQ9NRX6 74 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 ZFP30Q9Y2G7 519 aa6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 CARHSP1Q9Y2V2 147 aaKnown RBP6.22□□□□□ -1.41
RAPGEF1-205ENST00000419442 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 PEX7O00628 323 aa6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 CYCSP99999 105 aaKnown RBP6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 C9orf62Q8N4C0 152 aa6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.42
RAPGEF1-205ENST00000419442 LINC00862A6NCI5 91 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 GIPP09681 153 aaPredicted RBP6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 OR5AL1P0C617 328 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 LRRC37A5PQ49AS3 106 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 Q5BKY6 102 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 KRTAP11-1Q8IUC1 163 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 SMIM3Q9BZL3 60 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 WFDC1Q9HC57 220 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 NUDT15Q9NV35 164 aa6.2□□□□□ -1.42
RAPGEF1-205ENST00000419442 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 UBE2L6O14933 153 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 TNFRSF6BO95407 300 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 TSPAN13O95857 204 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 CXorf1O96002 111 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 SLC7A5P1Q8MH63 180 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 HIST1H2BAQ96A08 127 aa6.19□□□□□ -1.42
RAPGEF1-205ENST00000419442 HMSDA8MTL9 139 aa6.18□□□□□ -1.42
RAPGEF1-205ENST00000419442 SIX6O95475 246 aa6.18□□□□□ -1.42
RAPGEF1-205ENST00000419442 FGF6P10767 208 aa6.18□□□□□ -1.42
RAPGEF1-205ENST00000419442 AP1S3Q96PC3 154 aa6.18□□□□□ -1.42
RAPGEF1-205ENST00000419442 MED9Q9NWA0 146 aa6.18□□□□□ -1.42
RAPGEF1-205ENST00000419442 SMIM17P0DL12 118 aa6.17□□□□□ -1.42
RAPGEF1-205ENST00000419442 BCL2P10415 239 aa6.17□□□□□ -1.42
RAPGEF1-205ENST00000419442 EIF5AP63241 154 aaKnown RBP6.17□□□□□ -1.42
RAPGEF1-205ENST00000419442 SPANXN1Q5VSR9 72 aa6.17□□□□□ -1.42
RAPGEF1-205ENST00000419442 SUMO4Q6EEV6 95 aa6.17□□□□□ -1.42
RAPGEF1-205ENST00000419442 RPP21Q9H633 154 aaKnown RBP6.17□□□□□ -1.42
RAPGEF1-205ENST00000419442 A0A087WZ39 114 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 MUC21A0A140T8X8 626 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 KRTAP9-7A8MTY7 169 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 SSNA1O43805 119 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 APOMO95445 188 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 LTAP01374 205 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 CAMPP49913 170 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 MEF2BQ02080 365 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 CLLU1Q5K131 121 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 TEX261Q6UWH6 196 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 TSKUQ8WUA8 353 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 FMC1Q96HJ9 113 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 MLST8Q9BVC4 326 aa6.16□□□□□ -1.42
RAPGEF1-205ENST00000419442 PRSS47A8MTI9 375 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 B5MCH6 92 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 XCL1P47992 114 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 COTL1Q14019 142 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 RASL11AQ6T310 242 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 OR5A1Q8NGJ0 315 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 PPP1R1CQ8WVI7 109 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 ISOC2Q96AB3 205 aa6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 PSMG3Q9BT73 122 aaPredicted RBP6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 NKX6-2Q9C056 277 aaPredicted RBP6.15□□□□□ -1.42
RAPGEF1-205ENST00000419442 IGLV4-69A0A075B6H9 119 aa6.14□□□□□ -1.43
RAPGEF1-205ENST00000419442 FAM74A7A6NL05 159 aa6.14□□□□□ -1.43
RAPGEF1-205ENST00000419442 G3V3Q6 166 aa6.14□□□□□ -1.43
RAPGEF1-205ENST00000419442 CCL25O15444 150 aa6.14□□□□□ -1.43
RAPGEF1-205ENST00000419442 MPC2O95563 127 aa6.14□□□□□ -1.43
RAPGEF1-205ENST00000419442 NIT2Q9NQR4 276 aa6.14□□□□□ -1.43
RAPGEF1-205ENST00000419442 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 H7C423 109 aa6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 MBP02144 154 aa6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 MGPP08493 103 aa6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 ATP6V0CP27449 155 aa6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 RAB14P61106 215 aa6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 UBE2G1P62253 170 aa6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 ACTR3CQ9C0K3 210 aaPredicted RBP6.13□□□□□ -1.43
RAPGEF1-205ENST00000419442 H2BFSP57053 126 aa6.12□□□□□ -1.43
RAPGEF1-205ENST00000419442 UBE2G2P60604 165 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms