RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 NF1P21359 2839 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 TRBV7-3A0A075B6L6 115 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 MRPS36P82909 103 aaKnown RBP10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 RPL36AP83881 106 aaKnown RBP10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 TMEM170BQ5T4T1 132 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 SCGB1D4Q6XE38 83 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 RPL36ALQ969Q0 106 aaKnown RBP10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 PLEKHB2Q96CS7 222 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 FASNP49327 2511 aaKnown RBP10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 TRGV1A0A0A0MS02 117 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 CCL25O15444 150 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 MAPKAPK5-AS1Q8N8E1 139 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 LINC00482Q8N8I6 264 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 OR5A1Q8NGJ0 315 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 TTTY13Q9BZ97 58 aa10.5□□□□□ -0.73
HLA-DPA1-242ENST00000419277 A0A1B0GWB2 263 aa10.49□□□□□ -0.73
HLA-DPA1-242ENST00000419277 K7EQD1 137 aa10.49□□□□□ -0.73
HLA-DPA1-242ENST00000419277 LEPROTO15243 131 aa10.49□□□□□ -0.73
HLA-DPA1-242ENST00000419277 FXYD2P54710 66 aa10.49□□□□□ -0.73
HLA-DPA1-242ENST00000419277 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
HLA-DPA1-242ENST00000419277 CSDC2Q9Y534 153 aaKnown RBP10.49□□□□□ -0.73
HLA-DPA1-242ENST00000419277 IGHV3-73A0A0B4J1V6 119 aa10.48□□□□□ -0.73
HLA-DPA1-242ENST00000419277 LGALS3P17931 250 aaKnown RBP10.48□□□□□ -0.73
HLA-DPA1-242ENST00000419277 RRN3P1Q2M238 152 aa10.48□□□□□ -0.73
HLA-DPA1-242ENST00000419277 ZNRF2Q8NHG8 242 aa10.48□□□□□ -0.73
HLA-DPA1-242ENST00000419277 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
HLA-DPA1-242ENST00000419277 UBE2D4Q9Y2X8 147 aa10.48□□□□□ -0.73
HLA-DPA1-242ENST00000419277 ANK3Q12955 4377 aaKnown RBP10.48□□□□□ -0.73
HLA-DPA1-242ENST00000419277 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 TMEM223A0PJW6 202 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 J3QQQ9 107 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 FABP2P12104 132 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 TINCRA0A1B0GVN0 87 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 GAGE10A6NGK3 116 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 GIG44P09565 113 aaPredicted RBP10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 C9orf66Q5T8R8 295 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
HLA-DPA1-242ENST00000419277 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.74
HLA-DPA1-242ENST00000419277 A0A1W2PPM0 123 aa10.46□□□□□ -0.74
HLA-DPA1-242ENST00000419277 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.74
HLA-DPA1-242ENST00000419277 AMMECR1LQ6DCA0 310 aa10.46□□□□□ -0.74
HLA-DPA1-242ENST00000419277 Q6ZVH6 145 aa10.46□□□□□ -0.74
HLA-DPA1-242ENST00000419277 GTSF1LQ9H1H1 148 aa10.46□□□□□ -0.74
HLA-DPA1-242ENST00000419277 H7C423 109 aa10.45□□□□□ -0.74
HLA-DPA1-242ENST00000419277 K7EP13 123 aa10.45□□□□□ -0.74
HLA-DPA1-242ENST00000419277 K7EP34 96 aa10.45□□□□□ -0.74
HLA-DPA1-242ENST00000419277 NHP2Q9NX24 153 aaKnown RBP10.45□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SMIM9A6NGZ8 99 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 H3BUT2 72 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 Q6ZSN1 163 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 PHLDA1Q8WV24 401 aaPredicted RBP10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 A0A0J9YY99 117 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 HIST2H2BDQ6DRA6 164 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 Q6ZTI0 123 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SLC25A29Q8N8R3 303 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SMR3AQ99954 134 aa10.44□□□□□ -0.74
HLA-DPA1-242ENST00000419277 PRM2P04554 102 aa10.43□□□□□ -0.74
HLA-DPA1-242ENST00000419277 UBE2D3P61077 147 aa10.43□□□□□ -0.74
HLA-DPA1-242ENST00000419277 UBE2D2P62837 147 aa10.43□□□□□ -0.74
HLA-DPA1-242ENST00000419277 LYRM7Q5U5X0 104 aa10.43□□□□□ -0.74
HLA-DPA1-242ENST00000419277 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
HLA-DPA1-242ENST00000419277 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 TMEM238C9JI98 176 aa10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 EMP1P54849 157 aa10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 TIRAPP58753 221 aa10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 DGAT2L7PQ6IED9 249 aa10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 KIR2DL5BQ8NHK3 375 aa10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 NOP10Q9NPE3 64 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SETXQ7Z333 2677 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SETD2Q9BYW2 2564 aaPredicted RBP10.42□□□□□ -0.74
HLA-DPA1-242ENST00000419277 TRGV2A0A075B6R0 118 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 IGLV5-45A0A087WSX0 123 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 C12orf74Q32Q52 190 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 NSD1Q96L73 2696 aaPredicted RBP10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 IGHV1-58A0A0C4DH39 117 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 INAFM1C9JVW0 142 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 CRLF1O75462 422 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 HERVK_113P63121 156 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 SPCS1Q9Y6A9 102 aa10.41□□□□□ -0.74
HLA-DPA1-242ENST00000419277 UBE2D1P51668 147 aa10.4□□□□□ -0.74
HLA-DPA1-242ENST00000419277 FAM104AQ969W3 186 aa10.4□□□□□ -0.74
HLA-DPA1-242ENST00000419277 RAB37Q96AX2 223 aa10.4□□□□□ -0.74
HLA-DPA1-242ENST00000419277 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
HLA-DPA1-242ENST00000419277 GEMIN7Q9H840 131 aaKnown RBP10.4□□□□□ -0.74
HLA-DPA1-242ENST00000419277 KRTAP10-3P60369 221 aa10.39□□□□□ -0.75
HLA-DPA1-242ENST00000419277 LINC00612Q8N6U2 182 aa10.39□□□□□ -0.75
HLA-DPA1-242ENST00000419277 HECTD1Q9ULT8 2610 aa10.39□□□□□ -0.75
HLA-DPA1-242ENST00000419277 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 Q6ZUT4 128 aa10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 IGKV2-29A2NJV5 120 aaPredicted RBP10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
HLA-DPA1-242ENST00000419277 TSPEAR-AS2P59090 65 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms