RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 IGLV4-3A0A075B6K6 122 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 E9PLD3 99 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 K7EQD1 137 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 NMUP48645 174 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 HINT1P49773 126 aaPredicted RBP6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 MPV17L2Q567V2 206 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 KIR2DL5BQ8NHK3 375 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 FAM104AQ969W3 186 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 ZNF479Q96JC4 524 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 AMELXQ99217 191 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 SPANXA1Q9NS26 97 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 Q9UF83 564 aa6.47□□□□□ -1.37
LINCMD1-201ENST00000418518 SMIM9A6NGZ8 99 aa6.46□□□□□ -1.38
LINCMD1-201ENST00000418518 C11orf86A6NJI1 115 aa6.46□□□□□ -1.38
LINCMD1-201ENST00000418518 HSD52Q0P140 79 aa6.46□□□□□ -1.38
LINCMD1-201ENST00000418518 BATFQ16520 125 aa6.46□□□□□ -1.38
LINCMD1-201ENST00000418518 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
LINCMD1-201ENST00000418518 NOP10Q9NPE3 64 aaKnown RBP6.46□□□□□ -1.38
LINCMD1-201ENST00000418518 TRBV7-3A0A075B6L6 115 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 TRBV6-4A0A1B0GX49 114 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 LINC00694P0DN24 101 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 UBE2D3P61077 147 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 UBE2D2P62837 147 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 SEC11AP67812 179 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 COTL1Q14019 142 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 TMEM97Q5BJF2 176 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 X6R8D5 127 aa6.45□□□□□ -1.38
LINCMD1-201ENST00000418518 TRBV25-1A0A075B6N4 114 aa6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 MRPS36P82909 103 aaKnown RBP6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 RPL36AP83881 106 aaKnown RBP6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 DAZ4Q86SG3 579 aaKnown RBP6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 SBSPONQ8IVN8 264 aa6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 OR11H2Q8NH07 326 aa6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 ZNRF2Q8NHG8 242 aa6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 RPL36ALQ969Q0 106 aaKnown RBP6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 DAZ3Q9NR90 486 aaKnown RBP6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 CMYA5Q8N3K9 4069 aa6.44□□□□□ -1.38
LINCMD1-201ENST00000418518 HERVK_113P61574 105 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 TAL2Q16559 108 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 KRTAP24-1Q3LI83 254 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 SLC25A29Q8N8R3 303 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 DEFB104AQ8WTQ1 72 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 ORAOV1Q8WV07 137 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 PRADC1Q9BSG0 188 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 CHAC1Q9BUX1 264 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 TTTY13Q9BZ97 58 aa6.43□□□□□ -1.38
LINCMD1-201ENST00000418518 DNAH3Q8TD57 4116 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 BAHCC1Q9P281 2608 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 GAGE12BA1L429 117 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 GAGE7O76087 117 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 GAGE12FP0CL80 117 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 GAGE12GP0CL81 117 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 GAGE12IP0CL82 117 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 ZNF22P17026 224 aaPredicted RBP6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 APOC4P55056 127 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 TCTAP57738 103 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 GAGE1Q13065 139 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 FHL2Q14192 279 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 MAPKAPK5-AS1Q8N8E1 139 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 OPRPNQ99935 248 aaPredicted RBP6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 GTSF1LQ9H1H1 148 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 VCX2Q9H322 139 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 CSDC2Q9Y534 153 aaKnown RBP6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 COX11Q9Y6N1 276 aa6.42□□□□□ -1.38
LINCMD1-201ENST00000418518 TRGV2A0A075B6R0 118 aa6.41□□□□□ -1.38
LINCMD1-201ENST00000418518 MYMXA0A1B0GTQ4 84 aa6.41□□□□□ -1.38
LINCMD1-201ENST00000418518 TMEM223A0PJW6 202 aa6.41□□□□□ -1.38
LINCMD1-201ENST00000418518 LYRM9A8MSI8 78 aa6.41□□□□□ -1.38
LINCMD1-201ENST00000418518 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
LINCMD1-201ENST00000418518 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
LINCMD1-201ENST00000418518 PHLDA1Q8WV24 401 aaPredicted RBP6.41□□□□□ -1.38
LINCMD1-201ENST00000418518 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 TRAV8-6A0A0B4J262 113 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 A6NDN8 102 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 H7C423 109 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 NTM-AS1Q6ZSK4 140 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 Q6ZUT4 128 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 TM2D2Q9BX73 214 aa6.4□□□□□ -1.38
LINCMD1-201ENST00000418518 TRRAPQ9Y4A5 3859 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 A0A0J9YXV3 536 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 LEPROTO15243 131 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 ZNF25P17030 456 aaPredicted RBP6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 UBE2D1P51668 147 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 EMP1P54849 157 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 TSPEAR-AS2P59090 65 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 EGFEM1PQ0D2K5 195 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 OR5A1Q8NGJ0 315 aa6.39□□□□□ -1.39
LINCMD1-201ENST00000418518 TRGV4A0A0C4DH28 118 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 GAGE12JA6NER3 117 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 ZNF815PA8K554 130 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 A8MZ25 164 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 H3BRM9 83 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 MIFP14174 115 aa6.38□□□□□ -1.39
LINCMD1-201ENST00000418518 TIRAPP58753 221 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms