RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
COPS3-202ENST00000417352 BCL2L11O43521 198 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 SNAI2O43623 268 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 P01737 135 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 RPS20P60866 119 aaKnown RBP4.5□□□□□ -1.69
COPS3-202ENST00000417352 CCL20P78556 96 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 TWIST1Q15672 202 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 AMMECR1LQ6DCA0 310 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 SUMO4Q6EEV6 95 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 WDR73Q6P4I2 378 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 CLRN3Q8NCR9 226 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 MANBALQ9NQG1 85 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 MED9Q9NWA0 146 aa4.5□□□□□ -1.69
COPS3-202ENST00000417352 IGHV3-64A0A075B6Q5 118 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 G3V3Q6 166 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 M0QY20 66 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 CXCL1P09341 107 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 TRGC1P0CF51 173 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 NTF3P20783 257 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 AMTP48728 403 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 CACNG7P62955 275 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 COTL1Q14019 142 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 ZNF345Q14585 488 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 RNASEKQ6P5S7 137 aaKnown RBP4.49□□□□□ -1.69
COPS3-202ENST00000417352 RASL11AQ6T310 242 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 LYZL1Q6UWQ5 148 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 C9orf163Q8N9P6 203 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 GTSF1Q8WW33 167 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 MLST8Q9BVC4 326 aa4.49□□□□□ -1.69
COPS3-202ENST00000417352 MYCBP2O75592 4640 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 IGLV4-60A0A075B6I1 120 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 TRAV8-4A0A0B4J246 113 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 IGKV2-24A0A0C4DH68 120 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 GAGE12HA6NDE8 117 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 F2Z2F3 143 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 PANO1I0J062 215 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 ZNF561-AS1K7EIQ3 104 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 CHTF8P0CG12 524 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 IQCJQ1A5X6 159 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 EIF5AL1Q6IS14 154 aaKnown RBP4.48□□□□□ -1.69
COPS3-202ENST00000417352 SDIM1Q6ZPB5 146 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 SMIM15Q7Z3B0 74 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 LYPD6BQ8NI32 183 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 NIT2Q9NQR4 276 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 BIN3Q9NQY0 253 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 PRR34Q9NV39 138 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 VAX2Q9UIW0 290 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 KIF25-AS1Q9Y6Z4 181 aa4.48□□□□□ -1.69
COPS3-202ENST00000417352 FAT1Q14517 4588 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 TRAV26-2A0A0B4J265 109 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 HMSDA8MTL9 139 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 PDE6DO43924 150 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 HNRNPA3P51991 378 aaKnown RBP4.47□□□□□ -1.69
COPS3-202ENST00000417352 CEBPGP53567 150 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
COPS3-202ENST00000417352 MEF2BQ02080 365 aaPredicted RBP4.47□□□□□ -1.69
COPS3-202ENST00000417352 MAJINQ3KP22 176 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 HIGD2BQ4VC39 106 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 C20orf203Q8NBC4 194 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 C7orf33Q8WU49 177 aa4.47□□□□□ -1.69
COPS3-202ENST00000417352 A0A087WYN8 130 aa4.46□□□□□ -1.7
COPS3-202ENST00000417352 IGLC6P0CF74 106 aa4.46□□□□□ -1.7
COPS3-202ENST00000417352 COX6A2Q02221 97 aa4.46□□□□□ -1.7
COPS3-202ENST00000417352 GFRA4Q9GZZ7 299 aa4.46□□□□□ -1.7
COPS3-202ENST00000417352 RNASE7Q9H1E1 156 aaKnown RBP4.46□□□□□ -1.7
COPS3-202ENST00000417352 VPS13BQ7Z7G8 4022 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.45□□□□□ -1.7
COPS3-202ENST00000417352 A0A1B0GUV1 79 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 IGKV2-29A2NJV5 120 aaPredicted RBP4.45□□□□□ -1.7
COPS3-202ENST00000417352 C19orf71A6NCJ1 209 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 C9orf118A6NHY6 69 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 PMCHP20382 165 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 RPS10P46783 165 aaKnown RBP4.45□□□□□ -1.7
COPS3-202ENST00000417352 KRTAP26-1Q6PEX3 210 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 NUDT10Q8NFP7 164 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
COPS3-202ENST00000417352 C11orf52Q96A22 123 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 NUDT11Q96G61 164 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 TMEM101Q96IK0 257 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 BTF3L4Q96K17 158 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 PGLYRP4Q96LB8 373 aa4.45□□□□□ -1.7
COPS3-202ENST00000417352 RPP21Q9H633 154 aaKnown RBP4.45□□□□□ -1.7
COPS3-202ENST00000417352 TRAV1-1A0A0B4J248 108 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 PHOX2AO14813 284 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 APCSP02743 223 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 BCL2P10415 239 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 XCL1P47992 114 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 FOXA3P55318 350 aaPredicted RBP4.44□□□□□ -1.7
COPS3-202ENST00000417352 CNBPP62633 177 aaKnown RBP4.44□□□□□ -1.7
COPS3-202ENST00000417352 C9orf62Q8N4C0 152 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 GATD1Q8NB37 220 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 BORCS7Q96B45 105 aa4.44□□□□□ -1.7
COPS3-202ENST00000417352 RPL39LQ96EH5 51 aaKnown RBP4.44□□□□□ -1.7
COPS3-202ENST00000417352 TRBV20OR9-2A0A075B6H5 130 aa4.43□□□□□ -1.7
COPS3-202ENST00000417352 GATCO43716 136 aaKnown RBP4.43□□□□□ -1.7
COPS3-202ENST00000417352 NDUFS6O75380 124 aaKnown RBP4.43□□□□□ -1.7
COPS3-202ENST00000417352 Q6ZNX1 250 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms