RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 SPINK6Q6UWN8 80 aa6.29□□□□□ -1.4
MDC1-202ENST00000416571 C15orf56Q8N910 161 aa6.29□□□□□ -1.4
MDC1-202ENST00000416571 PKIGQ9Y2B9 76 aa6.29□□□□□ -1.4
MDC1-202ENST00000416571 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
MDC1-202ENST00000416571 SCO2A0A1W2PP80 73 aa6.28□□□□□ -1.4
MDC1-202ENST00000416571 COTL1Q14019 142 aa6.28□□□□□ -1.4
MDC1-202ENST00000416571 RASL11AQ6T310 242 aa6.28□□□□□ -1.4
MDC1-202ENST00000416571 FER1L6-AS1Q8NA97 138 aa6.28□□□□□ -1.4
MDC1-202ENST00000416571 PGLYRP4Q96LB8 373 aa6.28□□□□□ -1.4
MDC1-202ENST00000416571 MLST8Q9BVC4 326 aa6.28□□□□□ -1.4
MDC1-202ENST00000416571 A0A1B0GV50 99 aa6.27□□□□□ -1.41
MDC1-202ENST00000416571 GAS8-AS1O95177 125 aa6.27□□□□□ -1.41
MDC1-202ENST00000416571 CACNG7P62955 275 aa6.27□□□□□ -1.41
MDC1-202ENST00000416571 SFT2D1Q8WV19 159 aa6.27□□□□□ -1.41
MDC1-202ENST00000416571 NIT2Q9NQR4 276 aa6.27□□□□□ -1.41
MDC1-202ENST00000416571 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
MDC1-202ENST00000416571 A0A096LNI7 61 aa6.26□□□□□ -1.41
MDC1-202ENST00000416571 TRGC1P0CF51 173 aa6.26□□□□□ -1.41
MDC1-202ENST00000416571 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
MDC1-202ENST00000416571 RPS20P60866 119 aaKnown RBP6.26□□□□□ -1.41
MDC1-202ENST00000416571 AMMECR1LQ6DCA0 310 aa6.26□□□□□ -1.41
MDC1-202ENST00000416571 TMUB2Q71RG4 321 aa6.26□□□□□ -1.41
MDC1-202ENST00000416571 CHCHD10Q8WYQ3 142 aaPredicted RBP6.26□□□□□ -1.41
MDC1-202ENST00000416571 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
MDC1-202ENST00000416571 XKRY2A2RUG3 117 aa6.25□□□□□ -1.41
MDC1-202ENST00000416571 ARPC5O15511 151 aa6.25□□□□□ -1.41
MDC1-202ENST00000416571 RNASEKQ6P5S7 137 aaKnown RBP6.25□□□□□ -1.41
MDC1-202ENST00000416571 Q6ZRP5 223 aa6.25□□□□□ -1.41
MDC1-202ENST00000416571 KCNRGQ8N5I3 272 aa6.25□□□□□ -1.41
MDC1-202ENST00000416571 OR2D3Q8NGH3 330 aa6.25□□□□□ -1.41
MDC1-202ENST00000416571 FAM213BQ8TBF2 198 aa6.25□□□□□ -1.41
MDC1-202ENST00000416571 F2Z2F3 143 aa6.24□□□□□ -1.41
MDC1-202ENST00000416571 IGLC6P0CF74 106 aa6.24□□□□□ -1.41
MDC1-202ENST00000416571 RPL35P42766 123 aaKnown RBP6.24□□□□□ -1.41
MDC1-202ENST00000416571 UMAD1C9J7I0 102 aa6.23□□□□□ -1.41
MDC1-202ENST00000416571 MBD3L1Q8WWY6 194 aa6.23□□□□□ -1.41
MDC1-202ENST00000416571 CYTL1Q9NRR1 136 aa6.23□□□□□ -1.41
MDC1-202ENST00000416571 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
MDC1-202ENST00000416571 IFNA1P01562 189 aa6.22□□□□□ -1.41
MDC1-202ENST00000416571 H2AFB1P0C5Y9 115 aa6.22□□□□□ -1.41
MDC1-202ENST00000416571 CENPWQ5EE01 88 aa6.22□□□□□ -1.41
MDC1-202ENST00000416571 CARD19Q96LW7 228 aa6.22□□□□□ -1.41
MDC1-202ENST00000416571 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
MDC1-202ENST00000416571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
MDC1-202ENST00000416571 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
MDC1-202ENST00000416571 H7C423 109 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 ZNF561-AS1K7EIQ3 104 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 NCR2O95944 276 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 APCSP02743 223 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 NTF3P20783 257 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 XCL1P47992 114 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 SRSF9Q13242 221 aaKnown RBP eCLIP6.21□□□□□ -1.42
MDC1-202ENST00000416571 LYZL1Q6UWQ5 148 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 TMEM101Q96IK0 257 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 BTF3L4Q96K17 158 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 MANBALQ9NQG1 85 aa6.21□□□□□ -1.42
MDC1-202ENST00000416571 FGF6P10767 208 aa6.2□□□□□ -1.42
MDC1-202ENST00000416571 ZNF25P17030 456 aaPredicted RBP6.2□□□□□ -1.42
MDC1-202ENST00000416571 GNG4P50150 75 aa6.2□□□□□ -1.42
MDC1-202ENST00000416571 FOXI1Q12951 378 aa6.2□□□□□ -1.42
MDC1-202ENST00000416571 TWIST1Q15672 202 aa6.2□□□□□ -1.42
MDC1-202ENST00000416571 Q6ZNX1 250 aa6.2□□□□□ -1.42
MDC1-202ENST00000416571 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
MDC1-202ENST00000416571 LINC00526Q96FQ7 95 aa6.2□□□□□ -1.42
MDC1-202ENST00000416571 TRAV26-2A0A0B4J265 109 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 C19orf71A6NCJ1 209 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 CCL25O15444 150 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 SYCNQ0VAF6 134 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 SMIM15Q7Z3B0 74 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 GATD1Q8NB37 220 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 C11orf52Q96A22 123 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 ISOC2Q96AB3 205 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 SMIM12Q96EX1 92 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 BIN3Q9NQY0 253 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 GNG13Q9P2W3 67 aa6.19□□□□□ -1.42
MDC1-202ENST00000416571 LOC107984640A0A0U1RRK4 108 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 G3V3Q6 166 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 MT-ND6P03923 174 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 CTRLP40313 264 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 PTTG1IPP53801 180 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 CCL20P78556 96 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 ZNF345Q14585 488 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 SS18Q15532 418 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 ZNF664Q8N3J9 261 aa6.18□□□□□ -1.42
MDC1-202ENST00000416571 RPL39LQ96EH5 51 aaKnown RBP6.18□□□□□ -1.42
MDC1-202ENST00000416571 LINC00959A0A1B0GUT2 108 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 KANTRA0A1W2PQU2 76 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 RAB19A4D1S5 217 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 SDHAF1A6NFY7 115 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 CAMPP49913 170 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 EIF5AP63241 154 aaKnown RBP6.17□□□□□ -1.42
MDC1-202ENST00000416571 EIF5AL1Q6IS14 154 aaKnown RBP6.17□□□□□ -1.42
MDC1-202ENST00000416571 TEX261Q6UWH6 196 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 C9orf62Q8N4C0 152 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 PSORS1C2Q9UIG4 136 aa6.17□□□□□ -1.42
MDC1-202ENST00000416571 TMA7Q9Y2S6 64 aaKnown RBP6.17□□□□□ -1.42
MDC1-202ENST00000416571 TEX46H3BTG2 121 aa6.16□□□□□ -1.42
MDC1-202ENST00000416571 I3L3M4 83 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 1552 ms