RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PFDN1O60925 122 aa9.59□□□□□ -0.87
DDX56-202ENST00000415758 CACNG7P62955 275 aa9.59□□□□□ -0.87
DDX56-202ENST00000415758 FER1L6-AS1Q8NA97 138 aa9.59□□□□□ -0.87
DDX56-202ENST00000415758 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
DDX56-202ENST00000415758 RPL35P42766 123 aaKnown RBP9.58□□□□□ -0.88
DDX56-202ENST00000415758 RPS20P60866 119 aaKnown RBP9.58□□□□□ -0.88
DDX56-202ENST00000415758 COTL1Q14019 142 aa9.58□□□□□ -0.88
DDX56-202ENST00000415758 LYPD6BQ8NI32 183 aa9.58□□□□□ -0.88
DDX56-202ENST00000415758 LINC00474Q9P2X8 69 aa9.58□□□□□ -0.88
DDX56-202ENST00000415758 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
DDX56-202ENST00000415758 F2Z2F3 143 aa9.57□□□□□ -0.88
DDX56-202ENST00000415758 AMTP48728 403 aa9.57□□□□□ -0.88
DDX56-202ENST00000415758 HIGD2BQ4VC39 106 aa9.57□□□□□ -0.88
DDX56-202ENST00000415758 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
DDX56-202ENST00000415758 A0A096LNI7 61 aa9.56□□□□□ -0.88
DDX56-202ENST00000415758 C19orf71A6NCJ1 209 aa9.56□□□□□ -0.88
DDX56-202ENST00000415758 ARPC5O15511 151 aa9.56□□□□□ -0.88
DDX56-202ENST00000415758 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
DDX56-202ENST00000415758 CHCHD10Q8WYQ3 142 aaPredicted RBP9.56□□□□□ -0.88
DDX56-202ENST00000415758 GAS8-AS1O95177 125 aa9.55□□□□□ -0.88
DDX56-202ENST00000415758 KCNRGQ8N5I3 272 aa9.55□□□□□ -0.88
DDX56-202ENST00000415758 OR2D3Q8NGH3 330 aa9.55□□□□□ -0.88
DDX56-202ENST00000415758 FAM213BQ8TBF2 198 aa9.55□□□□□ -0.88
DDX56-202ENST00000415758 C11orf52Q96A22 123 aa9.55□□□□□ -0.88
DDX56-202ENST00000415758 A0A1B0GV50 99 aa9.54□□□□□ -0.88
DDX56-202ENST00000415758 Q6ZRP5 223 aa9.54□□□□□ -0.88
DDX56-202ENST00000415758 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
DDX56-202ENST00000415758 IGKV3OR2-268A0A0C4DH90 116 aa9.53□□□□□ -0.88
DDX56-202ENST00000415758 XKRY2A2RUG3 117 aa9.53□□□□□ -0.88
DDX56-202ENST00000415758 H7C423 109 aa9.53□□□□□ -0.88
DDX56-202ENST00000415758 NTF3P20783 257 aa9.53□□□□□ -0.88
DDX56-202ENST00000415758 FOXI1Q12951 378 aa9.53□□□□□ -0.88
DDX56-202ENST00000415758 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
DDX56-202ENST00000415758 SMIM12Q96EX1 92 aa9.53□□□□□ -0.88
DDX56-202ENST00000415758 NCR2O95944 276 aa9.52□□□□□ -0.89
DDX56-202ENST00000415758 H2AFB1P0C5Y9 115 aa9.52□□□□□ -0.89
DDX56-202ENST00000415758 CENPWQ5EE01 88 aa9.52□□□□□ -0.89
DDX56-202ENST00000415758 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
DDX56-202ENST00000415758 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
DDX56-202ENST00000415758 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
DDX56-202ENST00000415758 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
DDX56-202ENST00000415758 IFNA1P01562 189 aa9.5□□□□□ -0.89
DDX56-202ENST00000415758 ZNF345Q14585 488 aa9.5□□□□□ -0.89
DDX56-202ENST00000415758 Q6ZNX1 250 aa9.5□□□□□ -0.89
DDX56-202ENST00000415758 FGF6P10767 208 aa9.49□□□□□ -0.89
DDX56-202ENST00000415758 CTRLP40313 264 aa9.49□□□□□ -0.89
DDX56-202ENST00000415758 CCL20P78556 96 aa9.49□□□□□ -0.89
DDX56-202ENST00000415758 RNASEKQ6P5S7 137 aaKnown RBP9.49□□□□□ -0.89
DDX56-202ENST00000415758 OR5A1Q8NGJ0 315 aa9.49□□□□□ -0.89
DDX56-202ENST00000415758 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
DDX56-202ENST00000415758 LPAP08519 4548 aa9.49□□□□□ -0.89
DDX56-202ENST00000415758 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
DDX56-202ENST00000415758 ZNF25P17030 456 aaPredicted RBP9.48□□□□□ -0.89
DDX56-202ENST00000415758 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
DDX56-202ENST00000415758 TRAV1-1A0A0B4J248 108 aa9.47□□□□□ -0.89
DDX56-202ENST00000415758 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
DDX56-202ENST00000415758 RAB19A4D1S5 217 aa9.47□□□□□ -0.89
DDX56-202ENST00000415758 GNG4P50150 75 aa9.47□□□□□ -0.89
DDX56-202ENST00000415758 TWIST1Q15672 202 aa9.47□□□□□ -0.89
DDX56-202ENST00000415758 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
DDX56-202ENST00000415758 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
DDX56-202ENST00000415758 GNG13Q9P2W3 67 aa9.47□□□□□ -0.89
DDX56-202ENST00000415758 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.9
DDX56-202ENST00000415758 LINC00959A0A1B0GUT2 108 aa9.46□□□□□ -0.9
DDX56-202ENST00000415758 APCSP02743 223 aa9.46□□□□□ -0.9
DDX56-202ENST00000415758 XCL1P47992 114 aa9.46□□□□□ -0.9
DDX56-202ENST00000415758 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.9
DDX56-202ENST00000415758 TRBV20OR9-2A0A075B6H5 130 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 FAM231BA6NCW3 169 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 CCL25O15444 150 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 NUDT10Q8NFP7 164 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 RPL39LQ96EH5 51 aaKnown RBP9.45□□□□□ -0.9
DDX56-202ENST00000415758 NUDT11Q96G61 164 aa9.45□□□□□ -0.9
DDX56-202ENST00000415758 SDHAF1A6NFY7 115 aa9.44□□□□□ -0.9
DDX56-202ENST00000415758 HMSDA8MTL9 139 aa9.44□□□□□ -0.9
DDX56-202ENST00000415758 SMLR1H3BR10 107 aa9.44□□□□□ -0.9
DDX56-202ENST00000415758 BTF3L4Q96K17 158 aa9.44□□□□□ -0.9
DDX56-202ENST00000415758 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
DDX56-202ENST00000415758 PDE6DO43924 150 aa9.43□□□□□ -0.9
DDX56-202ENST00000415758 ESDP10768 282 aa9.43□□□□□ -0.9
DDX56-202ENST00000415758 EIF5AP63241 154 aaKnown RBP9.43□□□□□ -0.9
DDX56-202ENST00000415758 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
DDX56-202ENST00000415758 TMEM101Q96IK0 257 aa9.43□□□□□ -0.9
DDX56-202ENST00000415758 FAM210AQ96ND0 272 aa9.43□□□□□ -0.9
DDX56-202ENST00000415758 LOC107984640A0A0U1RRK4 108 aa9.42□□□□□ -0.9
DDX56-202ENST00000415758 A0A1W2PNN7 141 aa9.42□□□□□ -0.9
DDX56-202ENST00000415758 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
DDX56-202ENST00000415758 I3L3M4 83 aa9.42□□□□□ -0.9
DDX56-202ENST00000415758 BCL2L11O43521 198 aa9.42□□□□□ -0.9
DDX56-202ENST00000415758 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
DDX56-202ENST00000415758 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
DDX56-202ENST00000415758 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
DDX56-202ENST00000415758 CAMPP49913 170 aa9.41□□□□□ -0.9
DDX56-202ENST00000415758 SS18Q15532 418 aa9.41□□□□□ -0.9
DDX56-202ENST00000415758 ISOC2Q96AB3 205 aa9.41□□□□□ -0.9
DDX56-202ENST00000415758 CDC42SE2Q9NRR3 84 aa9.41□□□□□ -0.9
DDX56-202ENST00000415758 MED9Q9NWA0 146 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms