RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 PGLYRP4Q96LB8 373 aa10.02□□□□□ -0.81
ACTB-202ENST00000414620 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.81
ACTB-202ENST00000414620 PANO1I0J062 215 aa10.01□□□□□ -0.81
ACTB-202ENST00000414620 COTL1Q14019 142 aa10.01□□□□□ -0.81
ACTB-202ENST00000414620 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
ACTB-202ENST00000414620 IGKV3OR2-268A0A0C4DH90 116 aa10□□□□□ -0.81
ACTB-202ENST00000414620 hDV102S1A0JD36 115 aa10□□□□□ -0.81
ACTB-202ENST00000414620 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
ACTB-202ENST00000414620 RPL37AP61513 92 aaKnown RBP10□□□□□ -0.81
ACTB-202ENST00000414620 GATD1Q8NB37 220 aa10□□□□□ -0.81
ACTB-202ENST00000414620 RPL39LQ96EH5 51 aaKnown RBP10□□□□□ -0.81
ACTB-202ENST00000414620 hCG_2014768A0A024R1R8 64 aa9.99□□□□□ -0.81
ACTB-202ENST00000414620 A0A1B0GUV1 79 aa9.99□□□□□ -0.81
ACTB-202ENST00000414620 CEBPGP53567 150 aa9.99□□□□□ -0.81
ACTB-202ENST00000414620 FOXA3P55318 350 aaPredicted RBP9.99□□□□□ -0.81
ACTB-202ENST00000414620 WDR73Q6P4I2 378 aa9.99□□□□□ -0.81
ACTB-202ENST00000414620 ALKAL2Q6UX46 152 aa9.99□□□□□ -0.81
ACTB-202ENST00000414620 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
ACTB-202ENST00000414620 CNFNQ9BYD5 112 aa9.99□□□□□ -0.81
ACTB-202ENST00000414620 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
ACTB-202ENST00000414620 Q6ZNX1 250 aa9.98□□□□□ -0.81
ACTB-202ENST00000414620 CLRN3Q8NCR9 226 aa9.98□□□□□ -0.81
ACTB-202ENST00000414620 GATCO43716 136 aaKnown RBP9.97□□□□□ -0.81
ACTB-202ENST00000414620 AKAP14Q86UN6 197 aa9.97□□□□□ -0.81
ACTB-202ENST00000414620 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.82
ACTB-202ENST00000414620 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.82
ACTB-202ENST00000414620 GAGE12HA6NDE8 117 aa9.96□□□□□ -0.82
ACTB-202ENST00000414620 HNRNPA3P51991 378 aaKnown RBP9.96□□□□□ -0.82
ACTB-202ENST00000414620 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
ACTB-202ENST00000414620 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.82
ACTB-202ENST00000414620 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.82
ACTB-202ENST00000414620 APCSP02743 223 aa9.95□□□□□ -0.82
ACTB-202ENST00000414620 SLPIP03973 132 aa9.95□□□□□ -0.82
ACTB-202ENST00000414620 CNBPP62633 177 aaKnown RBP9.95□□□□□ -0.82
ACTB-202ENST00000414620 AMMECR1LQ6DCA0 310 aa9.95□□□□□ -0.82
ACTB-202ENST00000414620 RNASEKQ6P5S7 137 aaKnown RBP9.95□□□□□ -0.82
ACTB-202ENST00000414620 TMEM250H0YL14 139 aa9.94□□□□□ -0.82
ACTB-202ENST00000414620 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
ACTB-202ENST00000414620 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
ACTB-202ENST00000414620 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
ACTB-202ENST00000414620 PKHD1L1Q86WI1 4243 aa9.94□□□□□ -0.82
ACTB-202ENST00000414620 LRP1Q07954 4544 aaKnown RBP9.93□□□□□ -0.82
ACTB-202ENST00000414620 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
ACTB-202ENST00000414620 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
ACTB-202ENST00000414620 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.92□□□□□ -0.82
ACTB-202ENST00000414620 SDHAF1A6NFY7 115 aa9.92□□□□□ -0.82
ACTB-202ENST00000414620 A8MWL6 223 aa9.92□□□□□ -0.82
ACTB-202ENST00000414620 GAS8-AS1O95177 125 aa9.92□□□□□ -0.82
ACTB-202ENST00000414620 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
ACTB-202ENST00000414620 DPH3Q96FX2 82 aa9.92□□□□□ -0.82
ACTB-202ENST00000414620 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
ACTB-202ENST00000414620 NCR2O95944 276 aa9.91□□□□□ -0.82
ACTB-202ENST00000414620 OXTP01178 125 aa9.91□□□□□ -0.82
ACTB-202ENST00000414620 FGF6P10767 208 aa9.91□□□□□ -0.82
ACTB-202ENST00000414620 CHCHD10Q8WYQ3 142 aaPredicted RBP9.91□□□□□ -0.82
ACTB-202ENST00000414620 BORCS7Q96B45 105 aa9.91□□□□□ -0.82
ACTB-202ENST00000414620 PMCHP20382 165 aa9.9□□□□□ -0.82
ACTB-202ENST00000414620 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
ACTB-202ENST00000414620 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
ACTB-202ENST00000414620 SMIM7Q9BQ49 75 aa9.9□□□□□ -0.82
ACTB-202ENST00000414620 EIF5A2Q9GZV4 153 aaKnown RBP9.9□□□□□ -0.82
ACTB-202ENST00000414620 I3L3M4 83 aa9.89□□□□□ -0.83
ACTB-202ENST00000414620 CT83Q5H943 113 aa9.89□□□□□ -0.83
ACTB-202ENST00000414620 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
ACTB-202ENST00000414620 TEX261Q6UWH6 196 aa9.89□□□□□ -0.83
ACTB-202ENST00000414620 TMEM242Q9NWH2 141 aa9.89□□□□□ -0.83
ACTB-202ENST00000414620 A0A087WYN8 130 aa9.88□□□□□ -0.83
ACTB-202ENST00000414620 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
ACTB-202ENST00000414620 H7C423 109 aa9.88□□□□□ -0.83
ACTB-202ENST00000414620 LINC01551Q86U37 167 aa9.88□□□□□ -0.83
ACTB-202ENST00000414620 SPACA4Q8TDM5 124 aa9.88□□□□□ -0.83
ACTB-202ENST00000414620 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
ACTB-202ENST00000414620 HIGD1CA8MV81 97 aa9.87□□□□□ -0.83
ACTB-202ENST00000414620 TSHBP01222 138 aa9.87□□□□□ -0.83
ACTB-202ENST00000414620 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
ACTB-202ENST00000414620 COX6A2Q02221 97 aa9.87□□□□□ -0.83
ACTB-202ENST00000414620 BTF3L4Q96K17 158 aa9.87□□□□□ -0.83
ACTB-202ENST00000414620 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
ACTB-202ENST00000414620 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 TRBV6-5A0A0K0K1A5 114 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 A0A1B0GUT8 65 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 SRP19P09132 144 aaKnown RBP9.86□□□□□ -0.83
ACTB-202ENST00000414620 XCL1P47992 114 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 FOXI1Q12951 378 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 OR5A1Q8NGJ0 315 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 TSKUQ8WUA8 353 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 TMEM101Q96IK0 257 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 FAM210AQ96ND0 272 aa9.86□□□□□ -0.83
ACTB-202ENST00000414620 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
ACTB-202ENST00000414620 ESDP10768 282 aa9.85□□□□□ -0.83
ACTB-202ENST00000414620 ZNF25P17030 456 aaPredicted RBP9.85□□□□□ -0.83
ACTB-202ENST00000414620 PRSS3P2Q8NHM4 247 aa9.85□□□□□ -0.83
ACTB-202ENST00000414620 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
ACTB-202ENST00000414620 MRAP2Q96G30 205 aa9.85□□□□□ -0.83
ACTB-202ENST00000414620 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
ACTB-202ENST00000414620 GVQW2A0A096LPI5 108 aaPredicted RBP9.84□□□□□ -0.83
ACTB-202ENST00000414620 CCL25O15444 150 aa9.84□□□□□ -0.83
ACTB-202ENST00000414620 RAB4AP20338 218 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms