RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DNAH10OSP0CZ25 163 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 SPINT3P49223 89 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 NNATQ16517 81 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 C10orf128Q5T292 105 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 NTM-AS1Q6ZSK4 140 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 CIRBP-AS1Q8TBR5 109 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 U3KQK5 164 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 DUOX1Q9NRD9 1551 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 NUMA1Q14980 2115 aa2.39□□□□□ -2.03
SF3B1-203ENST00000414174 DDX60LQ5H9U9 1706 aaKnown RBP2.39□□□□□ -2.03
SF3B1-203ENST00000414174 PAPPA2Q9BXP8 1791 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 TRIP12Q14669 1992 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-203ENST00000414174 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 C17orf98A8MV24 154 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 RTL8CO15255 209 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 SAA2P0DJI9 122 aaPredicted RBP2.38□□□□□ -2.03
SF3B1-203ENST00000414174 PLXNA3P51805 1871 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 FAM27BQ5VT28 67 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 TMEM105Q8N8V8 129 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 Q8NBF4 154 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 IMMP1LQ96LU5 166 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 FAM215AQ9Y5M1 114 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 KIF25-AS1Q9Y6Z4 181 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 AGRNO00468 2067 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 PCNX2A6NKB5 2137 aa2.38□□□□□ -2.03
SF3B1-203ENST00000414174 NINQ8N4C6 2090 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 PIKFYVEQ9Y2I7 2098 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 IGLV10-54A0A075B6I4 117 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 IGHV3OR16-8A0A075B7F1 116 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 H3BPC8 53 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 H7C2G1 150 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 IGKV3-11P04433 115 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 TLX1NBP0CAT3 122 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 PRB4P10163 310 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-203ENST00000414174 FCER1GP30273 86 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 C20orf166-AS1Q96NR2 134 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 LRP6O75581 1613 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 PCNX3Q9H6A9 2034 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 DOCK9Q9BZ29 2069 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 RICTORQ6R327 1708 aa2.37□□□□□ -2.03
SF3B1-203ENST00000414174 GREB1Q4ZG55 1949 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 DLG5Q8TDM6 1919 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 IGKV1D-37A0A075B6S9 117 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 A0A087WVE0 104 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 TRAV12-3A0A0B4J271 114 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 A8MUU9 505 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 D6R8Y8 96 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 P0C880 135 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 DEFA4P12838 97 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 ELOF1P60002 83 aaKnown RBP2.36□□□□□ -2.03
SF3B1-203ENST00000414174 LYZP61626 148 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.36□□□□□ -2.03
SF3B1-203ENST00000414174 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 MUSTN1Q8IVN3 82 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 MIR7-3HGQ8N6C7 128 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 TMEM254Q8TBM7 123 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 TMEM263Q8WUH6 116 aaKnown RBP2.36□□□□□ -2.03
SF3B1-203ENST00000414174 NDUFA4L2Q9NRX3 87 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 SNURFQ9Y675 71 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 ICOSQ9Y6W8 199 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 PLXNA2O75051 1894 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 KIAA2026Q5HYC2 2103 aa2.36□□□□□ -2.03
SF3B1-203ENST00000414174 DEPDC5O75140 1603 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 SCN7AQ01118 1682 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 PARP4Q9UKK3 1724 aaKnown RBP2.35□□□□□ -2.03
SF3B1-203ENST00000414174 IGKV1D-42A0A075B6H8 117 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.35□□□□□ -2.03
SF3B1-203ENST00000414174 IGKV1OR2-108A0A075B7D4 117 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 A0A087WYN8 130 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 LINC01546A6NGU7 62 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 HMGN4O00479 90 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 INSP01308 110 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 BAALC-AS2P0C853 105 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 Q6ZR54 194 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 WFDC6Q9BQY6 131 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 KIAA1549Q9HCM3 1950 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 MUC22E2RYF6 1773 aaPredicted RBP2.35□□□□□ -2.03
SF3B1-203ENST00000414174 KIAA1549LQ6ZVL6 1849 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 DOCK11Q5JSL3 2073 aa2.35□□□□□ -2.03
SF3B1-203ENST00000414174 ANKRD36A6QL64 1941 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 TCF20Q9UGU0 1960 aaKnown RBP2.34□□□□□ -2.03
SF3B1-203ENST00000414174 TOGARAM1Q9Y4F4 1720 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 ARID1AO14497 2285 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 A0A096LNJ9 63 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 K7EMI3 77 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 IGLV1-47P01700 117 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 IGHV3-30P01768 117 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 PATE4P0C8F1 98 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 IGHV3-30-5P0DP03 117 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 PLNP26678 52 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 LINC01547P58512 204 aaPredicted RBP2.34□□□□□ -2.03
SF3B1-203ENST00000414174 GTF3C1Q12789 2109 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 SPANXN5Q5MJ07 72 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 LYPD6Q86Y78 171 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 OBSCN-AS1Q96MR7 158 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 DEFB126Q9BYW3 111 aa2.34□□□□□ -2.03
SF3B1-203ENST00000414174 LTBP1Q14766 1721 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms