RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 INSL3P51460 131 aa12.3□□□□□ -0.44
PTPRC-206ENST00000413409 ANKRD39Q53RE8 183 aa12.3□□□□□ -0.44
PTPRC-206ENST00000413409 C1orf158Q8N1D5 194 aa12.3□□□□□ -0.44
PTPRC-206ENST00000413409 HTN1P15515 57 aa12.29□□□□□ -0.44
PTPRC-206ENST00000413409 PLNP26678 52 aa12.29□□□□□ -0.44
PTPRC-206ENST00000413409 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
PTPRC-206ENST00000413409 ERASQ7Z444 233 aa12.29□□□□□ -0.44
PTPRC-206ENST00000413409 TMEM208Q9BTX3 173 aa12.29□□□□□ -0.44
PTPRC-206ENST00000413409 DLEU1O43261 78 aa12.28□□□□□ -0.44
PTPRC-206ENST00000413409 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
PTPRC-206ENST00000413409 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
PTPRC-206ENST00000413409 RS1O15537 224 aa12.27□□□□□ -0.45
PTPRC-206ENST00000413409 IGHV4-30-4P0DP06 118 aa12.27□□□□□ -0.45
PTPRC-206ENST00000413409 FGF6P10767 208 aa12.27□□□□□ -0.45
PTPRC-206ENST00000413409 CFAP126Q5VTH2 177 aa12.27□□□□□ -0.45
PTPRC-206ENST00000413409 RNASE8Q8TDE3 154 aaKnown RBP12.27□□□□□ -0.45
PTPRC-206ENST00000413409 TMEM141Q96I45 108 aa12.27□□□□□ -0.45
PTPRC-206ENST00000413409 TIMM17AQ99595 171 aa12.27□□□□□ -0.45
PTPRC-206ENST00000413409 F8VRH5 84 aa12.26□□□□□ -0.45
PTPRC-206ENST00000413409 NEXN-AS1Q8NBZ9 246 aa12.26□□□□□ -0.45
PTPRC-206ENST00000413409 TMEM263Q8WUH6 116 aaKnown RBP12.26□□□□□ -0.45
PTPRC-206ENST00000413409 MRPL35Q9NZE8 188 aaKnown RBP12.26□□□□□ -0.45
PTPRC-206ENST00000413409 TP53TG1Q9Y2A0 90 aa12.26□□□□□ -0.45
PTPRC-206ENST00000413409 I3L3M4 83 aa12.25□□□□□ -0.45
PTPRC-206ENST00000413409 GIG44P09565 113 aaPredicted RBP12.25□□□□□ -0.45
PTPRC-206ENST00000413409 COL5A1-AS1Q5SY13 56 aa12.25□□□□□ -0.45
PTPRC-206ENST00000413409 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
PTPRC-206ENST00000413409 BAALCQ8WXS3 180 aa12.25□□□□□ -0.45
PTPRC-206ENST00000413409 SPATA25Q9BR10 227 aa12.25□□□□□ -0.45
PTPRC-206ENST00000413409 HHLA3Q9XRX5 114 aa12.25□□□□□ -0.45
PTPRC-206ENST00000413409 A0A1B0GV90 55 aa12.24□□□□□ -0.45
PTPRC-206ENST00000413409 LY6G6CO95867 125 aa12.24□□□□□ -0.45
PTPRC-206ENST00000413409 TSHBP01222 138 aa12.24□□□□□ -0.45
PTPRC-206ENST00000413409 IGHV3-53P01767 116 aa12.24□□□□□ -0.45
PTPRC-206ENST00000413409 STPG4Q8N801 248 aa12.24□□□□□ -0.45
PTPRC-206ENST00000413409 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
PTPRC-206ENST00000413409 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
PTPRC-206ENST00000413409 IGIPA6NJ69 53 aa12.23□□□□□ -0.45
PTPRC-206ENST00000413409 PRM2P04554 102 aa12.23□□□□□ -0.45
PTPRC-206ENST00000413409 CHTOPQ9Y3Y2 248 aaKnown RBP12.23□□□□□ -0.45
PTPRC-206ENST00000413409 A8MZ25 164 aa12.22□□□□□ -0.45
PTPRC-206ENST00000413409 SIVA1O15304 175 aa12.22□□□□□ -0.45
PTPRC-206ENST00000413409 AZU1P20160 251 aa12.22□□□□□ -0.45
PTPRC-206ENST00000413409 BATFQ16520 125 aa12.22□□□□□ -0.45
PTPRC-206ENST00000413409 C2orf91Q6ZV80 131 aa12.22□□□□□ -0.45
PTPRC-206ENST00000413409 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
PTPRC-206ENST00000413409 WFDC10AQ9H1F0 79 aa12.22□□□□□ -0.45
PTPRC-206ENST00000413409 DAZ2Q13117 558 aaKnown RBP12.21□□□□□ -0.45
PTPRC-206ENST00000413409 ZC2HC1BQ5TFG8 222 aa12.21□□□□□ -0.45
PTPRC-206ENST00000413409 RETNQ9HD89 108 aa12.21□□□□□ -0.45
PTPRC-206ENST00000413409 TP73-AS1Q9UF72 201 aa12.21□□□□□ -0.45
PTPRC-206ENST00000413409 NACAE9PAV3 2078 aa12.2□□□□□ -0.46
PTPRC-206ENST00000413409 IGHV3OR16-12A0A075B7B8 117 aa12.2□□□□□ -0.46
PTPRC-206ENST00000413409 C20orf203Q8NBC4 194 aa12.2□□□□□ -0.46
PTPRC-206ENST00000413409 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
PTPRC-206ENST00000413409 VPS13DQ5THJ4 4388 aa12.19□□□□□ -0.46
PTPRC-206ENST00000413409 IGHV3-73A0A0B4J1V6 119 aa12.19□□□□□ -0.46
PTPRC-206ENST00000413409 PRSS29PA6NIE9 313 aa12.19□□□□□ -0.46
PTPRC-206ENST00000413409 RPL35AP18077 110 aaKnown RBP12.19□□□□□ -0.46
PTPRC-206ENST00000413409 NMUP48645 174 aa12.19□□□□□ -0.46
PTPRC-206ENST00000413409 HINT1P49773 126 aaPredicted RBP12.19□□□□□ -0.46
PTPRC-206ENST00000413409 PMVKQ15126 192 aa12.19□□□□□ -0.46
PTPRC-206ENST00000413409 PAPPA-AS1Q5QFB9 102 aa12.19□□□□□ -0.46
PTPRC-206ENST00000413409 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
PTPRC-206ENST00000413409 TRGV1A0A0A0MS02 117 aa12.18□□□□□ -0.46
PTPRC-206ENST00000413409 TRAV4A0A0B4J268 109 aa12.18□□□□□ -0.46
PTPRC-206ENST00000413409 NPSP0C0P6 89 aa12.18□□□□□ -0.46
PTPRC-206ENST00000413409 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
PTPRC-206ENST00000413409 GTSCR1Q86UQ5 136 aa12.18□□□□□ -0.46
PTPRC-206ENST00000413409 P0DMU3 169 aa12.17□□□□□ -0.46
PTPRC-206ENST00000413409 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
PTPRC-206ENST00000413409 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
PTPRC-206ENST00000413409 OR4C5Q8NGB2 326 aa12.17□□□□□ -0.46
PTPRC-206ENST00000413409 CIDEAO60543 219 aa12.16□□□□□ -0.46
PTPRC-206ENST00000413409 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
PTPRC-206ENST00000413409 BVES-AS1Q5T3Y7 98 aa12.16□□□□□ -0.46
PTPRC-206ENST00000413409 Q6ZSN1 163 aa12.16□□□□□ -0.46
PTPRC-206ENST00000413409 HIGD1BQ9P298 99 aa12.16□□□□□ -0.46
PTPRC-206ENST00000413409 PYGO1Q9Y3Y4 419 aa12.16□□□□□ -0.46
PTPRC-206ENST00000413409 PKHD1P08F94 4074 aa12.16□□□□□ -0.46
PTPRC-206ENST00000413409 IGKV2D-26A0A0A0MRZ7 120 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 TRBV10-1A0A0K0K1A3 114 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 PLAC8L1A1L4L8 177 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 HSD52Q0P140 79 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 RRN3P1Q2M238 152 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 MPV17L2Q567V2 206 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 PCP2Q8IVA1 136 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 CST9LQ9H4G1 147 aa12.15□□□□□ -0.46
PTPRC-206ENST00000413409 IGLV4-69A0A075B6H9 119 aa12.14□□□□□ -0.47
PTPRC-206ENST00000413409 CRYBA4P53673 196 aa12.14□□□□□ -0.47
PTPRC-206ENST00000413409 Q6ZTI0 123 aa12.14□□□□□ -0.47
PTPRC-206ENST00000413409 DYNC1H1Q14204 4646 aaKnown RBP12.13□□□□□ -0.47
PTPRC-206ENST00000413409 E9PLD3 99 aa12.12□□□□□ -0.47
PTPRC-206ENST00000413409 K7EQD1 137 aa12.12□□□□□ -0.47
PTPRC-206ENST00000413409 SEC11AP67812 179 aa12.12□□□□□ -0.47
PTPRC-206ENST00000413409 KRTAP4-5Q9BYR2 181 aa12.12□□□□□ -0.47
PTPRC-206ENST00000413409 SPANXA1Q9NS26 97 aa12.12□□□□□ -0.47
PTPRC-206ENST00000413409 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
PTPRC-206ENST00000413409 TCTAP57738 103 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms