RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 FRZBQ92765 325 aa6.67□□□□□ -1.34
NCKIPSD-202ENST00000413374 CNFNQ9BYD5 112 aa6.67□□□□□ -1.34
NCKIPSD-202ENST00000413374 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 HIGD1CA8MV81 97 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 USP17L23D6RBM5 183 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 UBE2L6O14933 153 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 REG3AQ06141 175 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 TMEM241Q24JQ0 296 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 TEX261Q6UWH6 196 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 C20orf203Q8NBC4 194 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 TSKUQ8WUA8 353 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 BORCS7Q96B45 105 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 TMEM70Q9BUB7 260 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
NCKIPSD-202ENST00000413374 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
NCKIPSD-202ENST00000413374 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
NCKIPSD-202ENST00000413374 PMCHP20382 165 aa6.65□□□□□ -1.34
NCKIPSD-202ENST00000413374 RPL23P62829 140 aaKnown RBP6.65□□□□□ -1.34
NCKIPSD-202ENST00000413374 MIAQ16674 131 aa6.65□□□□□ -1.34
NCKIPSD-202ENST00000413374 OSTCQ9NRP0 149 aa6.65□□□□□ -1.34
NCKIPSD-202ENST00000413374 PRR34Q9NV39 138 aa6.65□□□□□ -1.34
NCKIPSD-202ENST00000413374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 A0A1B0GUT8 65 aa6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 IGKV2-29A2NJV5 120 aaPredicted RBP6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 PEA15Q15121 130 aa6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 ADIRFQ15847 76 aa6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 CT83Q5H943 113 aa6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 ISOC2Q96AB3 205 aa6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 V9GYV3 84 aa6.64□□□□□ -1.35
NCKIPSD-202ENST00000413374 SDHAF1A6NFY7 115 aa6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 SMKR1H3BMG3 65 aa6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 PRSS1P07477 247 aa6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 C14orf177Q52M58 125 aa6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 RNASEKQ6P5S7 137 aaKnown RBP6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 AMN1Q8IY45 258 aa6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 NUP35Q8NFH5 326 aa6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 RNF185Q96GF1 192 aa6.63□□□□□ -1.35
NCKIPSD-202ENST00000413374 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 A0A1B0GUV1 79 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 NDUFS6O75380 124 aaKnown RBP6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 APCSP02743 223 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 RAB4AP20338 218 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 RIGQ13278 110 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 AMMECR1LQ6DCA0 310 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 TMEM191AQ9H0A3 160 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 ST20Q9HBF5 79 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 NAT8Q9UHE5 227 aa6.62□□□□□ -1.35
NCKIPSD-202ENST00000413374 I3L3M4 83 aa6.61□□□□□ -1.35
NCKIPSD-202ENST00000413374 NCR2O95944 276 aa6.61□□□□□ -1.35
NCKIPSD-202ENST00000413374 RPS10P46783 165 aaKnown RBP6.61□□□□□ -1.35
NCKIPSD-202ENST00000413374 Q6ZSA8 131 aa6.61□□□□□ -1.35
NCKIPSD-202ENST00000413374 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
NCKIPSD-202ENST00000413374 TMEM242Q9NWH2 141 aa6.61□□□□□ -1.35
NCKIPSD-202ENST00000413374 TRAV8-4A0A0B4J246 113 aa6.6□□□□□ -1.35
NCKIPSD-202ENST00000413374 TRBV6-5A0A0K0K1A5 114 aa6.6□□□□□ -1.35
NCKIPSD-202ENST00000413374 FAM231BA6NCW3 169 aa6.6□□□□□ -1.35
NCKIPSD-202ENST00000413374 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
NCKIPSD-202ENST00000413374 FGF6P10767 208 aa6.6□□□□□ -1.35
NCKIPSD-202ENST00000413374 CAMPP49913 170 aa6.6□□□□□ -1.35
NCKIPSD-202ENST00000413374 NAT8BQ9UHF3 227 aa6.6□□□□□ -1.35
NCKIPSD-202ENST00000413374 hDV102S1A0JD36 115 aa6.59□□□□□ -1.35
NCKIPSD-202ENST00000413374 TSHBP01222 138 aa6.59□□□□□ -1.35
NCKIPSD-202ENST00000413374 LINC00528Q8N1L1 170 aa6.59□□□□□ -1.35
NCKIPSD-202ENST00000413374 CHAC1Q9BUX1 264 aa6.59□□□□□ -1.35
NCKIPSD-202ENST00000413374 SMIM27A0A1W2PRY6 76 aa6.58□□□□□ -1.36
NCKIPSD-202ENST00000413374 POLR2KP53803 58 aaKnown RBP6.58□□□□□ -1.36
NCKIPSD-202ENST00000413374 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
NCKIPSD-202ENST00000413374 MRPL54Q6P161 138 aaKnown RBP6.58□□□□□ -1.36
NCKIPSD-202ENST00000413374 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
NCKIPSD-202ENST00000413374 MRAP2Q96G30 205 aa6.58□□□□□ -1.36
NCKIPSD-202ENST00000413374 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
NCKIPSD-202ENST00000413374 VCYO14598 125 aa6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 ESDP10768 282 aa6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 MRPL51Q4U2R6 128 aaKnown RBP6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 HIGD2BQ4VC39 106 aa6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 FAM104BQ5XKR9 115 aa6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 CLRN3Q8NCR9 226 aa6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 BTF3L4Q96K17 158 aa6.57□□□□□ -1.36
NCKIPSD-202ENST00000413374 H7C423 109 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 PANO1I0J062 215 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 SLPIP03973 132 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 FCER1GP30273 86 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 XCL1P47992 114 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 NRACQ8N912 160 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 OR5A1Q8NGJ0 315 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 SMDT1Q9H4I9 107 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
NCKIPSD-202ENST00000413374 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
NCKIPSD-202ENST00000413374 CKS2P33552 79 aa6.55□□□□□ -1.36
NCKIPSD-202ENST00000413374 RAB14P61106 215 aa6.55□□□□□ -1.36
NCKIPSD-202ENST00000413374 SUMO2P61956 95 aaKnown RBP6.55□□□□□ -1.36
NCKIPSD-202ENST00000413374 SDIM1Q6ZPB5 146 aa6.55□□□□□ -1.36
NCKIPSD-202ENST00000413374 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
NCKIPSD-202ENST00000413374 MYCBP2O75592 4640 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms