RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 TRAV8-4A0A0B4J246 113 aa14.41□□□□□ -0.1
MSH6-202ENST00000411819 TRAV26-2A0A0B4J265 109 aa14.41□□□□□ -0.1
MSH6-202ENST00000411819 A0A1B0GUV1 79 aa14.41□□□□□ -0.1
MSH6-202ENST00000411819 KRTAP29-1A8MX34 341 aaPredicted RBP14.41□□□□□ -0.1
MSH6-202ENST00000411819 C9orf163Q8N9P6 203 aa14.41□□□□□ -0.1
MSH6-202ENST00000411819 OCC1Q8TAD7 63 aa14.41□□□□□ -0.1
MSH6-202ENST00000411819 CNFNQ9BYD5 112 aa14.41□□□□□ -0.1
MSH6-202ENST00000411819 hDV102S1A0JD36 115 aa14.4□□□□□ -0.1
MSH6-202ENST00000411819 CLRN3Q8NCR9 226 aa14.4□□□□□ -0.1
MSH6-202ENST00000411819 KRTAP10-4P60372 401 aaPredicted RBP14.39□□□□□ -0.11
MSH6-202ENST00000411819 ALKAL2Q6UX46 152 aa14.39□□□□□ -0.11
MSH6-202ENST00000411819 SMIM15Q7Z3B0 74 aa14.39□□□□□ -0.11
MSH6-202ENST00000411819 AKAP14Q86UN6 197 aa14.39□□□□□ -0.11
MSH6-202ENST00000411819 GATD1Q8NB37 220 aa14.39□□□□□ -0.11
MSH6-202ENST00000411819 hCG_2014768A0A024R1R8 64 aa14.37□□□□□ -0.11
MSH6-202ENST00000411819 GATCO43716 136 aaKnown RBP14.37□□□□□ -0.11
MSH6-202ENST00000411819 CEBPGP53567 150 aa14.37□□□□□ -0.11
MSH6-202ENST00000411819 RPL37AP61513 92 aaKnown RBP14.37□□□□□ -0.11
MSH6-202ENST00000411819 BLOC1S1P78537 153 aa14.37□□□□□ -0.11
MSH6-202ENST00000411819 GTSF1Q8WW33 167 aa14.37□□□□□ -0.11
MSH6-202ENST00000411819 RPL39LQ96EH5 51 aaKnown RBP14.37□□□□□ -0.11
MSH6-202ENST00000411819 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.37□□□□□ -0.11
MSH6-202ENST00000411819 IGKV3OR2-268A0A0C4DH90 116 aa14.36□□□□□ -0.11
MSH6-202ENST00000411819 TMEM250H0YL14 139 aa14.36□□□□□ -0.11
MSH6-202ENST00000411819 Q6ZNX1 250 aa14.36□□□□□ -0.11
MSH6-202ENST00000411819 AP5S1Q9NUS5 200 aa14.36□□□□□ -0.11
MSH6-202ENST00000411819 FOXA3P55318 350 aaPredicted RBP14.34□□□□□ -0.11
MSH6-202ENST00000411819 CNBPP62633 177 aaKnown RBP14.34□□□□□ -0.11
MSH6-202ENST00000411819 AMMECR1LQ6DCA0 310 aa14.34□□□□□ -0.11
MSH6-202ENST00000411819 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.33□□□□□ -0.12
MSH6-202ENST00000411819 PANO1I0J062 215 aa14.33□□□□□ -0.12
MSH6-202ENST00000411819 SDIM1Q6ZPB5 146 aa14.33□□□□□ -0.12
MSH6-202ENST00000411819 A8MWL6 223 aa14.32□□□□□ -0.12
MSH6-202ENST00000411819 APCSP02743 223 aa14.32□□□□□ -0.12
MSH6-202ENST00000411819 RNASEKQ6P5S7 137 aaKnown RBP14.32□□□□□ -0.12
MSH6-202ENST00000411819 LRP1Q07954 4544 aaKnown RBP14.32□□□□□ -0.12
MSH6-202ENST00000411819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.31□□□□□ -0.12
MSH6-202ENST00000411819 IGKV2-29A2NJV5 120 aaPredicted RBP14.31□□□□□ -0.12
MSH6-202ENST00000411819 GAGE12HA6NDE8 117 aa14.31□□□□□ -0.12
MSH6-202ENST00000411819 TEX261Q6UWH6 196 aa14.31□□□□□ -0.12
MSH6-202ENST00000411819 FAM231DQ6ZW35 169 aa14.31□□□□□ -0.12
MSH6-202ENST00000411819 IGHV3-64A0A075B6Q5 118 aa14.3□□□□□ -0.12
MSH6-202ENST00000411819 SDHAF1A6NFY7 115 aa14.3□□□□□ -0.12
MSH6-202ENST00000411819 NCR2O95944 276 aa14.3□□□□□ -0.12
MSH6-202ENST00000411819 BORCS7Q96B45 105 aa14.3□□□□□ -0.12
MSH6-202ENST00000411819 EIF5A2Q9GZV4 153 aaKnown RBP14.29□□□□□ -0.12
MSH6-202ENST00000411819 FAT3Q8TDW7 4589 aa14.29□□□□□ -0.12
MSH6-202ENST00000411819 CT83Q5H943 113 aa14.28□□□□□ -0.12
MSH6-202ENST00000411819 LYPD6BQ8NI32 183 aa14.28□□□□□ -0.12
MSH6-202ENST00000411819 SMIM7Q9BQ49 75 aa14.28□□□□□ -0.12
MSH6-202ENST00000411819 OXTP01178 125 aa14.27□□□□□ -0.13
MSH6-202ENST00000411819 SLPIP03973 132 aa14.27□□□□□ -0.13
MSH6-202ENST00000411819 CFAP161Q6P656 301 aa14.27□□□□□ -0.13
MSH6-202ENST00000411819 C15orf56Q8N910 161 aa14.27□□□□□ -0.13
MSH6-202ENST00000411819 DPH3Q96FX2 82 aa14.27□□□□□ -0.13
MSH6-202ENST00000411819 PKHD1L1Q86WI1 4243 aa14.26□□□□□ -0.13
MSH6-202ENST00000411819 H7C423 109 aa14.26□□□□□ -0.13
MSH6-202ENST00000411819 CHTF8P0CG12 524 aa14.26□□□□□ -0.13
MSH6-202ENST00000411819 FGF6P10767 208 aa14.26□□□□□ -0.13
MSH6-202ENST00000411819 PMCHP20382 165 aa14.26□□□□□ -0.13
MSH6-202ENST00000411819 HIGD2BQ4VC39 106 aa14.26□□□□□ -0.13
MSH6-202ENST00000411819 CHCHD10Q8WYQ3 142 aaPredicted RBP14.26□□□□□ -0.13
MSH6-202ENST00000411819 I3L3M4 83 aa14.25□□□□□ -0.13
MSH6-202ENST00000411819 HNRNPA3P51991 378 aaKnown RBP14.25□□□□□ -0.13
MSH6-202ENST00000411819 CIRBPQ14011 172 aaKnown RBP14.25□□□□□ -0.13
MSH6-202ENST00000411819 LINC01551Q86U37 167 aa14.24□□□□□ -0.13
MSH6-202ENST00000411819 BTF3L4Q96K17 158 aa14.24□□□□□ -0.13
MSH6-202ENST00000411819 A0A1B0GUT8 65 aa14.23□□□□□ -0.13
MSH6-202ENST00000411819 ZNF727A8MUV8 499 aa14.23□□□□□ -0.13
MSH6-202ENST00000411819 HIGD1CA8MV81 97 aa14.23□□□□□ -0.13
MSH6-202ENST00000411819 TSKUQ8WUA8 353 aa14.23□□□□□ -0.13
MSH6-202ENST00000411819 TMEM101Q96IK0 257 aa14.23□□□□□ -0.13
MSH6-202ENST00000411819 ST20Q9HBF5 79 aa14.23□□□□□ -0.13
MSH6-202ENST00000411819 TRBV6-5A0A0K0K1A5 114 aa14.22□□□□□ -0.13
MSH6-202ENST00000411819 GAS8-AS1O95177 125 aa14.22□□□□□ -0.13
MSH6-202ENST00000411819 ZNF25P17030 456 aaPredicted RBP14.22□□□□□ -0.13
MSH6-202ENST00000411819 FAM210AQ96ND0 272 aa14.22□□□□□ -0.13
MSH6-202ENST00000411819 TMEM242Q9NWH2 141 aa14.22□□□□□ -0.13
MSH6-202ENST00000411819 A0A087WYN8 130 aa14.21□□□□□ -0.13
MSH6-202ENST00000411819 SPACA4Q8TDM5 124 aa14.21□□□□□ -0.13
MSH6-202ENST00000411819 RPS10P46783 165 aaKnown RBP14.2□□□□□ -0.14
MSH6-202ENST00000411819 OR5A1Q8NGJ0 315 aa14.2□□□□□ -0.14
MSH6-202ENST00000411819 MRAP2Q96G30 205 aa14.2□□□□□ -0.14
MSH6-202ENST00000411819 RNF185Q96GF1 192 aa14.2□□□□□ -0.14
MSH6-202ENST00000411819 TMEM191AQ9H0A3 160 aa14.2□□□□□ -0.14
MSH6-202ENST00000411819 FAM231BA6NCW3 169 aa14.19□□□□□ -0.14
MSH6-202ENST00000411819 TSHBP01222 138 aa14.19□□□□□ -0.14
MSH6-202ENST00000411819 XCL1P47992 114 aa14.19□□□□□ -0.14
MSH6-202ENST00000411819 OSTCQ9NRP0 149 aa14.19□□□□□ -0.14
MSH6-202ENST00000411819 SRP19P09132 144 aaKnown RBP14.18□□□□□ -0.14
MSH6-202ENST00000411819 COX6A2Q02221 97 aa14.18□□□□□ -0.14
MSH6-202ENST00000411819 SERTAD4-AS1Q5TG53 156 aa14.18□□□□□ -0.14
MSH6-202ENST00000411819 AMN1Q8IY45 258 aa14.18□□□□□ -0.14
MSH6-202ENST00000411819 GVQW2A0A096LPI5 108 aaPredicted RBP14.17□□□□□ -0.14
MSH6-202ENST00000411819 NDUFS6O75380 124 aaKnown RBP14.17□□□□□ -0.14
MSH6-202ENST00000411819 ESDP10768 282 aa14.17□□□□□ -0.14
MSH6-202ENST00000411819 FOXI1Q12951 378 aa14.17□□□□□ -0.14
MSH6-202ENST00000411819 IGKV2-24A0A0C4DH68 120 aa14.16□□□□□ -0.14
MSH6-202ENST00000411819 CCL25O15444 150 aa14.16□□□□□ -0.14
MSH6-202ENST00000411819 RAB4AP20338 218 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 360.1 ms