RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HBZP02008 142 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 POLR2KP53803 58 aaKnown RBP-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 RANP62826 216 aaKnown RBP-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 SPANXN2Q5MJ10 180 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 LYRM7Q5U5X0 104 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 LAMTOR1Q6IAA8 161 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 Q6ZT83 130 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 AHSA2Q719I0 299 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 CCDC89Q8N998 374 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 SKA1Q96BD8 255 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 LLPHQ9BRT6 129 aaKnown RBP-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 C20orf27Q9GZN8 174 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 TMEM165Q9HC07 324 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 FAIMQ9NVQ4 179 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 COMMD9Q9P000 198 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 LSM2Q9Y333 95 aaKnown RBP-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 NOP16Q9Y3C1 178 aaKnown RBP-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 LENEPQ9Y5L5 61 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 DUOX2Q9NRD8 1548 aa-2.88□□□□□ -2.87
RNU4-88P-201ENST00000411220 A0A0U1RRA0 63 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 EXOC1LA0A1B0GW35 172 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 A0A1W2PRQ8 180 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 SUPT3HB4E1H0 165 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 SFTA3P0C7M3 94 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 GFAPP14136 432 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 DAD1P61803 113 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 BLCAPP62952 87 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 PSMG4Q5JS54 123 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 PIP5KL1Q5T9C9 394 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 C5orf46Q6UWT4 87 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 CPLX4Q7Z7G2 160 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 SYS1Q8N2H4 156 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 OR51Q1Q8NH59 317 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 HVCN1Q96D96 273 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 TEX12Q9BXU0 123 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 NPCDR1Q9BY65 106 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 CFL2Q9Y281 166 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 TMEM98Q9Y2Y6 226 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 BZW2Q9Y6E2 419 aaKnown RBP-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 PPLO60437 1756 aa-2.89□□□□□ -2.87
RNU4-88P-201ENST00000411220 ITSN1Q15811 1721 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 A0A087WV62 115 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 TNFSF15O95150 251 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 CSTBP04080 98 aaKnown RBP-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 FAM58BPP0C7Q3 252 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 CD9P21926 228 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 MAXP61244 160 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 REEP5Q00765 189 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 CAV1Q03135 178 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 GUK1Q16774 197 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 RGS21Q2M5E4 152 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 KRBOX4Q5JUW0 171 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 GLYATL2Q8WU03 294 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 TSLPQ969D9 159 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 FAM213AQ9BRX8 229 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 MAP1LC3AQ9H492 121 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 MYH16Q9H6N6 1097 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 BEX1Q9HBH7 125 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 CHRAC1Q9NRG0 131 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 LINC00312Q9Y6C7 94 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 FAM208AQ9UK61 1670 aaKnown RBP-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 CEP164Q9UPV0 1460 aa-2.9□□□□□ -2.87
RNU4-88P-201ENST00000411220 TGIF2-C20orf24A0A0A6YYL0 155 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 TRBV7-6A0A0J9YX20 115 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 MGAT4DA6NG13 374 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC169A6NNP5 214 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 BIRC5O15392 142 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 LEPROTL1O95214 131 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 NDUFC2O95298 119 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 TMEM50AO95807 157 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 APOA1P02647 267 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 IFNA4P05014 189 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 IGLC1P0CG04 106 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 SKP1P63208 163 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 YWHAHQ04917 246 aaPredicted RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 C1DQ13901 141 aaKnown RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 SSX2Q16385 188 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 WHAMMP3Q1A5X7 153 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 NKAIN1Q4KMZ8 207 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC38Q502W7 563 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 HOOK3Q86VS8 718 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 MUSTN1Q8IVN3 82 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC83Q8IWF9 413 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 ST13P4Q8IZP2 240 aaPredicted RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 HAVCR2Q8TDQ0 301 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 TOMM6Q96B49 74 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC124Q96CT7 223 aaKnown RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 MAP1LC3BQ9GZQ8 125 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 GEMIN7Q9H840 131 aaKnown RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 ACOT13Q9NPJ3 140 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 MRM2Q9UI43 246 aaKnown RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 TARBP1Q13395 1621 aaKnown RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 ROCK2O75116 1388 aaKnown RBP-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 ADGRL2O95490 1459 aa-2.91□□□□□ -2.88
RNU4-88P-201ENST00000411220 EVPLLA8MZ36 301 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 OOSP1A8MZH6 123 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 TSTD3H0UI37 97 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 H0YIV9 168 aa-2.92□□□□□ -2.88
RNU4-88P-201ENST00000411220 CCDC179H3BU77 68 aa-2.92□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms