RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 RBMY1DP0C7P1 496 aaKnown RBP17.37■□□□□ 0.37
PMS1-205ENST00000409985 DEFB136Q30KP8 78 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 MAP6D1Q9H9H5 199 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 TMEM223A0PJW6 202 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 J3QQQ9 107 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 RHODO00212 210 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 DEFB114Q30KQ6 69 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 DUX3Q96PT4 197 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 IGLV4-3A0A075B6K6 122 aa17.36■□□□□ 0.37
PMS1-205ENST00000409985 DYNLRB2Q8TF09 96 aa17.36■□□□□ 0.37
PMS1-205ENST00000409985 RAX2Q96IS3 184 aa17.36■□□□□ 0.37
PMS1-205ENST00000409985 AMELXQ99217 191 aa17.36■□□□□ 0.37
PMS1-205ENST00000409985 DNAJC30Q96LL9 226 aa17.35■□□□□ 0.37
PMS1-205ENST00000409985 VCX2Q9H322 139 aa17.35■□□□□ 0.37
PMS1-205ENST00000409985 EMP1P54849 157 aa17.35■□□□□ 0.37
PMS1-205ENST00000409985 BEAN1Q3B7T3 259 aa17.35■□□□□ 0.37
PMS1-205ENST00000409985 DNAJC9-AS1A6NH13 148 aa17.34■□□□□ 0.37
PMS1-205ENST00000409985 LGALS3P17931 250 aaKnown RBP17.34■□□□□ 0.37
PMS1-205ENST00000409985 TNFRSF18Q9Y5U5 241 aa17.33■□□□□ 0.37
PMS1-205ENST00000409985 TSPEAR-AS2P59090 65 aa17.33■□□□□ 0.36
PMS1-205ENST00000409985 IGHV3-30P01768 117 aa17.32■□□□□ 0.36
PMS1-205ENST00000409985 IGHV3-30-5P0DP03 117 aa17.32■□□□□ 0.36
PMS1-205ENST00000409985 INSP01308 110 aa17.31■□□□□ 0.36
PMS1-205ENST00000409985 ZNF22P17026 224 aaPredicted RBP17.31■□□□□ 0.36
PMS1-205ENST00000409985 HILS1P60008 231 aa17.31■□□□□ 0.36
PMS1-205ENST00000409985 LYRM7Q5U5X0 104 aa17.31■□□□□ 0.36
PMS1-205ENST00000409985 C11orf72Q8NBR9 251 aa17.31■□□□□ 0.36
PMS1-205ENST00000409985 PGPEP1Q9NXJ5 209 aa17.31■□□□□ 0.36
PMS1-205ENST00000409985 DEFB104AQ8WTQ1 72 aa17.31■□□□□ 0.36
PMS1-205ENST00000409985 CFAP126Q5VTH2 177 aa17.3■□□□□ 0.36
PMS1-205ENST00000409985 SPANXA1Q9NS26 97 aa17.3■□□□□ 0.36
PMS1-205ENST00000409985 MRPL16Q9NX20 251 aaKnown RBP17.3■□□□□ 0.36
PMS1-205ENST00000409985 IGHV3-53P01767 116 aa17.29■□□□□ 0.36
PMS1-205ENST00000409985 MRPS36P82909 103 aaKnown RBP17.29■□□□□ 0.36
PMS1-205ENST00000409985 Q6ZSV7 163 aa17.29■□□□□ 0.36
PMS1-205ENST00000409985 OPRPNQ99935 248 aaPredicted RBP17.29■□□□□ 0.36
PMS1-205ENST00000409985 GAGE13Q4V321 117 aa17.29■□□□□ 0.36
PMS1-205ENST00000409985 C2CD3Q4AC94 2353 aa17.29■□□□□ 0.36
PMS1-205ENST00000409985 RS1O15537 224 aa17.28■□□□□ 0.36
PMS1-205ENST00000409985 NDUFA11Q86Y39 141 aa17.28■□□□□ 0.36
PMS1-205ENST00000409985 ZNF418Q8TF45 676 aaPredicted RBP17.28■□□□□ 0.36
PMS1-205ENST00000409985 LINC01587Q99440 93 aa17.28■□□□□ 0.36
PMS1-205ENST00000409985 H3BMG7 143 aa17.27■□□□□ 0.36
PMS1-205ENST00000409985 FHL3Q13643 280 aa17.27■□□□□ 0.36
PMS1-205ENST00000409985 PRO0461Q9UI25 63 aa17.27■□□□□ 0.36
PMS1-205ENST00000409985 HTN1P15515 57 aa17.27■□□□□ 0.35
PMS1-205ENST00000409985 UBE2D3P61077 147 aa17.27■□□□□ 0.35
PMS1-205ENST00000409985 UBE2D2P62837 147 aa17.27■□□□□ 0.35
PMS1-205ENST00000409985 KHDC1LQ5JSQ8 128 aa17.27■□□□□ 0.35
PMS1-205ENST00000409985 J3QR89 54 aa17.26■□□□□ 0.35
PMS1-205ENST00000409985 FAM104AQ969W3 186 aa17.26■□□□□ 0.35
PMS1-205ENST00000409985 A0A0J9YXV3 536 aa17.25■□□□□ 0.35
PMS1-205ENST00000409985 CD28P10747 220 aa17.25■□□□□ 0.35
PMS1-205ENST00000409985 RPL24P83731 157 aaKnown RBP17.25■□□□□ 0.35
PMS1-205ENST00000409985 TEX48A0A1B0GUV7 120 aa17.24■□□□□ 0.35
PMS1-205ENST00000409985 TSPAN13O95857 204 aa17.24■□□□□ 0.35
PMS1-205ENST00000409985 FBN1P35555 2871 aaKnown RBP17.24■□□□□ 0.35
PMS1-205ENST00000409985 PROK1P58294 105 aa17.24■□□□□ 0.35
PMS1-205ENST00000409985 WFDC2Q14508 124 aa17.24■□□□□ 0.35
PMS1-205ENST00000409985 CHCHD7Q9BUK0 85 aa17.24■□□□□ 0.35
PMS1-205ENST00000409985 RNASE1P07998 156 aaKnown RBP17.23■□□□□ 0.35
PMS1-205ENST00000409985 CMC4P56277 68 aaPredicted RBP17.23■□□□□ 0.35
PMS1-205ENST00000409985 IGHV3-73A0A0B4J1V6 119 aa17.22■□□□□ 0.35
PMS1-205ENST00000409985 TINCRA0A1B0GVN0 87 aa17.22■□□□□ 0.35
PMS1-205ENST00000409985 CFC1BP0CG36 223 aa17.22■□□□□ 0.35
PMS1-205ENST00000409985 CFC1P0CG37 223 aa17.22■□□□□ 0.35
PMS1-205ENST00000409985 TRBV20-1A0A075B6N2 111 aa17.22■□□□□ 0.35
PMS1-205ENST00000409985 TMEM238C9JI98 176 aa17.22■□□□□ 0.35
PMS1-205ENST00000409985 C10orf126Q8N4M7 172 aa17.22■□□□□ 0.35
PMS1-205ENST00000409985 ATRQ13535 2644 aa17.21■□□□□ 0.35
PMS1-205ENST00000409985 ODF3L2Q3SX64 289 aa17.21■□□□□ 0.35
PMS1-205ENST00000409985 IL17DQ8TAD2 202 aa17.21■□□□□ 0.35
PMS1-205ENST00000409985 TIMM21Q9BVV7 248 aa17.21■□□□□ 0.35
PMS1-205ENST00000409985 UBE2D4Q9Y2X8 147 aa17.21■□□□□ 0.35
PMS1-205ENST00000409985 Q6ZSN1 163 aa17.2■□□□□ 0.34
PMS1-205ENST00000409985 PRIMA1Q86XR5 153 aa17.2■□□□□ 0.34
PMS1-205ENST00000409985 PRO1854Q9UHT4 67 aa17.2■□□□□ 0.34
PMS1-205ENST00000409985 APOMO95445 188 aa17.19■□□□□ 0.34
PMS1-205ENST00000409985 COTL1Q14019 142 aa17.19■□□□□ 0.34
PMS1-205ENST00000409985 STHQ8IWL8 128 aa17.19■□□□□ 0.34
PMS1-205ENST00000409985 ATP6V0E2Q8NHE4 81 aa17.19■□□□□ 0.34
PMS1-205ENST00000409985 NACAE9PAV3 2078 aa17.19■□□□□ 0.34
PMS1-205ENST00000409985 SORL1Q92673 2214 aa17.19■□□□□ 0.34
PMS1-205ENST00000409985 A0A0B4J2C4 111 aa17.18■□□□□ 0.34
PMS1-205ENST00000409985 IGHV1-58A0A0C4DH39 117 aa17.18■□□□□ 0.34
PMS1-205ENST00000409985 CCL24O00175 119 aa17.18■□□□□ 0.34
PMS1-205ENST00000409985 IGHV3-30-3P0DP02 117 aa17.18■□□□□ 0.34
PMS1-205ENST00000409985 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.17■□□□□ 0.34
PMS1-205ENST00000409985 C21orf62-AS1Q17RA5 79 aa17.16■□□□□ 0.34
PMS1-205ENST00000409985 PRM2P04554 102 aa17.16■□□□□ 0.34
PMS1-205ENST00000409985 C16orf95Q9H693 158 aa17.16■□□□□ 0.34
PMS1-205ENST00000409985 A0A0J9YXY3 114 aa17.15■□□□□ 0.34
PMS1-205ENST00000409985 C1orf158Q8N1D5 194 aa17.15■□□□□ 0.34
PMS1-205ENST00000409985 TRBV10-1A0A0K0K1A3 114 aa17.14■□□□□ 0.33
PMS1-205ENST00000409985 FAM110AQ9BQ89 295 aa17.14■□□□□ 0.33
PMS1-205ENST00000409985 LOC107984156A0A0G2JMH3 177 aa17.14■□□□□ 0.33
PMS1-205ENST00000409985 TIRAPP58753 221 aa17.14■□□□□ 0.33
PMS1-205ENST00000409985 ETDBQ3ZM63 59 aa17.14■□□□□ 0.33
PMS1-205ENST00000409985 ARL17AQ8IVW1 177 aa17.14■□□□□ 0.33
PMS1-205ENST00000409985 TSSC4Q9Y5U2 329 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms