RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 LINC01620Q4KN68 170 aa11.72□□□□□ -0.53
ITM2C-204ENST00000409704 C20orf203Q8NBC4 194 aa11.72□□□□□ -0.53
ITM2C-204ENST00000409704 DEFB104AQ8WTQ1 72 aa11.72□□□□□ -0.53
ITM2C-204ENST00000409704 AMTP48728 403 aa11.71□□□□□ -0.53
ITM2C-204ENST00000409704 KRTAP26-1Q6PEX3 210 aa11.71□□□□□ -0.53
ITM2C-204ENST00000409704 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
ITM2C-204ENST00000409704 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
ITM2C-204ENST00000409704 USP17L23D6RBM5 183 aa11.7□□□□□ -0.54
ITM2C-204ENST00000409704 REG3AQ06141 175 aa11.7□□□□□ -0.54
ITM2C-204ENST00000409704 TSKUQ8WUA8 353 aa11.7□□□□□ -0.54
ITM2C-204ENST00000409704 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
ITM2C-204ENST00000409704 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
ITM2C-204ENST00000409704 UBE2L6O14933 153 aa11.69□□□□□ -0.54
ITM2C-204ENST00000409704 BORCS7Q96B45 105 aa11.69□□□□□ -0.54
ITM2C-204ENST00000409704 GFRA4Q9GZZ7 299 aa11.69□□□□□ -0.54
ITM2C-204ENST00000409704 OSTCQ9NRP0 149 aa11.69□□□□□ -0.54
ITM2C-204ENST00000409704 FAM229AH3BQW9 127 aa11.68□□□□□ -0.54
ITM2C-204ENST00000409704 INAFM2P0DMQ5 153 aa11.68□□□□□ -0.54
ITM2C-204ENST00000409704 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
ITM2C-204ENST00000409704 V9GYV3 84 aa11.67□□□□□ -0.54
ITM2C-204ENST00000409704 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
ITM2C-204ENST00000409704 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
ITM2C-204ENST00000409704 FAM231BA6NCW3 169 aa11.66□□□□□ -0.54
ITM2C-204ENST00000409704 NCR2O95944 276 aa11.66□□□□□ -0.54
ITM2C-204ENST00000409704 SCXQ7RTU7 201 aa11.66□□□□□ -0.54
ITM2C-204ENST00000409704 ISOC2Q96AB3 205 aa11.66□□□□□ -0.54
ITM2C-204ENST00000409704 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
ITM2C-204ENST00000409704 SDHAF1A6NFY7 115 aa11.65□□□□□ -0.54
ITM2C-204ENST00000409704 PRSS1P07477 247 aa11.65□□□□□ -0.54
ITM2C-204ENST00000409704 FAM74A3Q4VXF1 159 aa11.65□□□□□ -0.54
ITM2C-204ENST00000409704 MYCBP2O75592 4640 aa11.64□□□□□ -0.55
ITM2C-204ENST00000409704 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
ITM2C-204ENST00000409704 C9JQL5 133 aa11.64□□□□□ -0.55
ITM2C-204ENST00000409704 APCSP02743 223 aa11.64□□□□□ -0.55
ITM2C-204ENST00000409704 RPL23P62829 140 aaKnown RBP11.64□□□□□ -0.55
ITM2C-204ENST00000409704 TMEM191AQ9H0A3 160 aa11.64□□□□□ -0.55
ITM2C-204ENST00000409704 GAS8-AS1O95177 125 aa11.63□□□□□ -0.55
ITM2C-204ENST00000409704 SRSF3P84103 164 aaKnown RBP11.63□□□□□ -0.55
ITM2C-204ENST00000409704 ADIRFQ15847 76 aa11.63□□□□□ -0.55
ITM2C-204ENST00000409704 TMEM241Q24JQ0 296 aa11.63□□□□□ -0.55
ITM2C-204ENST00000409704 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
ITM2C-204ENST00000409704 RNF185Q96GF1 192 aa11.63□□□□□ -0.55
ITM2C-204ENST00000409704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.62□□□□□ -0.55
ITM2C-204ENST00000409704 IGKV2-29A2NJV5 120 aaPredicted RBP11.62□□□□□ -0.55
ITM2C-204ENST00000409704 CHAC1Q9BUX1 264 aa11.62□□□□□ -0.55
ITM2C-204ENST00000409704 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
ITM2C-204ENST00000409704 SRRM2Q9UQ35 2752 aaKnown RBP11.62□□□□□ -0.55
ITM2C-204ENST00000409704 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
ITM2C-204ENST00000409704 NUP35Q8NFH5 326 aa11.61□□□□□ -0.55
ITM2C-204ENST00000409704 H7C423 109 aa11.6□□□□□ -0.55
ITM2C-204ENST00000409704 I3L3M4 83 aa11.6□□□□□ -0.55
ITM2C-204ENST00000409704 RAB4AP20338 218 aa11.6□□□□□ -0.55
ITM2C-204ENST00000409704 RPS10P46783 165 aaKnown RBP11.6□□□□□ -0.55
ITM2C-204ENST00000409704 PEA15Q15121 130 aa11.6□□□□□ -0.55
ITM2C-204ENST00000409704 AMMECR1LQ6DCA0 310 aa11.6□□□□□ -0.55
ITM2C-204ENST00000409704 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
ITM2C-204ENST00000409704 MRAP2Q96G30 205 aa11.6□□□□□ -0.55
ITM2C-204ENST00000409704 TSHBP01222 138 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 FGF6P10767 208 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 PMCHP20382 165 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 RIGQ13278 110 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 CLRN3Q8NCR9 226 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 SMDT1Q9H4I9 107 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 ST20Q9HBF5 79 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 TMEM242Q9NWH2 141 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 NAT8BQ9UHF3 227 aa11.59□□□□□ -0.55
ITM2C-204ENST00000409704 IGKV3OR2-268A0A0C4DH90 116 aa11.58□□□□□ -0.56
ITM2C-204ENST00000409704 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
ITM2C-204ENST00000409704 C9orf163Q8N9P6 203 aa11.58□□□□□ -0.56
ITM2C-204ENST00000409704 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
ITM2C-204ENST00000409704 PLA2G1BP04054 148 aaKnown RBP11.57□□□□□ -0.56
ITM2C-204ENST00000409704 ESDP10768 282 aa11.57□□□□□ -0.56
ITM2C-204ENST00000409704 ZNF25P17030 456 aaPredicted RBP11.57□□□□□ -0.56
ITM2C-204ENST00000409704 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
ITM2C-204ENST00000409704 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
ITM2C-204ENST00000409704 SMIM27A0A1W2PRY6 76 aa11.56□□□□□ -0.56
ITM2C-204ENST00000409704 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
ITM2C-204ENST00000409704 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
ITM2C-204ENST00000409704 SMKR1H3BMG3 65 aa11.56□□□□□ -0.56
ITM2C-204ENST00000409704 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
ITM2C-204ENST00000409704 PKHD1L1Q86WI1 4243 aa11.56□□□□□ -0.56
ITM2C-204ENST00000409704 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
ITM2C-204ENST00000409704 HERC1Q15751 4861 aa11.55□□□□□ -0.56
ITM2C-204ENST00000409704 FLG2Q5D862 2391 aaPredicted RBP11.54□□□□□ -0.56
ITM2C-204ENST00000409704 NRACQ8N912 160 aa11.54□□□□□ -0.56
ITM2C-204ENST00000409704 C7orf77A4D0Y5 90 aa11.53□□□□□ -0.56
ITM2C-204ENST00000409704 OR5A1Q8NGJ0 315 aa11.53□□□□□ -0.56
ITM2C-204ENST00000409704 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
ITM2C-204ENST00000409704 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
ITM2C-204ENST00000409704 BTF3L4Q96K17 158 aa11.53□□□□□ -0.56
ITM2C-204ENST00000409704 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
ITM2C-204ENST00000409704 PPP1R17O96001 155 aa11.52□□□□□ -0.57
ITM2C-204ENST00000409704 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
ITM2C-204ENST00000409704 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
ITM2C-204ENST00000409704 MRPL52Q86TS9 123 aaKnown RBP11.52□□□□□ -0.57
ITM2C-204ENST00000409704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.52□□□□□ -0.57
ITM2C-204ENST00000409704 A0A1B0GW15 77 aa11.51□□□□□ -0.57
ITM2C-204ENST00000409704 KRTAP10-4P60372 401 aaPredicted RBP11.51□□□□□ -0.57
ITM2C-204ENST00000409704 SUMO2P61956 95 aaKnown RBP11.51□□□□□ -0.57
ITM2C-204ENST00000409704 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms