RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 I3L3M4 83 aa9.41□□□□□ -0.9
SMARCB1-203ENST00000407082 M0QY20 66 aa9.41□□□□□ -0.9
SMARCB1-203ENST00000407082 NPSP0C0P6 89 aa9.41□□□□□ -0.9
SMARCB1-203ENST00000407082 ZNF124Q15973 351 aa9.41□□□□□ -0.9
SMARCB1-203ENST00000407082 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 SPRY2O43597 315 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 GTF2H5Q6ZYL4 71 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 PCP2Q8IVA1 136 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 OR4C5Q8NGB2 326 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 DNAJC30Q96LL9 226 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 LINC01587Q99440 93 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 TP53TG1Q9Y2A0 90 aa9.4□□□□□ -0.9
SMARCB1-203ENST00000407082 DYNC2H1Q8NCM8 4307 aaKnown RBP9.4□□□□□ -0.91
SMARCB1-203ENST00000407082 C9orf118A6NHY6 69 aa9.39□□□□□ -0.91
SMARCB1-203ENST00000407082 E9PLD3 99 aa9.39□□□□□ -0.91
SMARCB1-203ENST00000407082 CRYBA4P53673 196 aa9.39□□□□□ -0.91
SMARCB1-203ENST00000407082 STHQ8IWL8 128 aa9.39□□□□□ -0.91
SMARCB1-203ENST00000407082 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
SMARCB1-203ENST00000407082 JPT2Q9H910 190 aa9.39□□□□□ -0.91
SMARCB1-203ENST00000407082 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
SMARCB1-203ENST00000407082 IGIPA6NJ69 53 aa9.38□□□□□ -0.91
SMARCB1-203ENST00000407082 IGLV1-51P01701 117 aa9.38□□□□□ -0.91
SMARCB1-203ENST00000407082 CD300EQ496F6 205 aaPredicted RBP9.38□□□□□ -0.91
SMARCB1-203ENST00000407082 FAM110AQ9BQ89 295 aa9.38□□□□□ -0.91
SMARCB1-203ENST00000407082 TNFRSF18Q9Y5U5 241 aa9.38□□□□□ -0.91
SMARCB1-203ENST00000407082 MYMXA0A1B0GTQ4 84 aa9.37□□□□□ -0.91
SMARCB1-203ENST00000407082 CEND1Q8N111 149 aa9.37□□□□□ -0.91
SMARCB1-203ENST00000407082 TM2D2Q9BX73 214 aa9.37□□□□□ -0.91
SMARCB1-203ENST00000407082 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
SMARCB1-203ENST00000407082 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
SMARCB1-203ENST00000407082 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
SMARCB1-203ENST00000407082 GCSHP23434 173 aa9.36□□□□□ -0.91
SMARCB1-203ENST00000407082 CST9LQ9H4G1 147 aa9.36□□□□□ -0.91
SMARCB1-203ENST00000407082 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
SMARCB1-203ENST00000407082 A6NJY4 79 aa9.35□□□□□ -0.91
SMARCB1-203ENST00000407082 SMAGPQ0VAQ4 97 aa9.35□□□□□ -0.91
SMARCB1-203ENST00000407082 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
SMARCB1-203ENST00000407082 TP73-AS1Q9UF72 201 aa9.35□□□□□ -0.91
SMARCB1-203ENST00000407082 PYGO1Q9Y3Y4 419 aa9.35□□□□□ -0.91
SMARCB1-203ENST00000407082 GAGE10A6NGK3 116 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 CCL25O15444 150 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 CIDEAO60543 219 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 HTN1P15515 57 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 TCTAP57738 103 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 HIST1H4GQ99525 98 aa9.34□□□□□ -0.91
SMARCB1-203ENST00000407082 SORL1Q92673 2214 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 RS1O15537 224 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 TSHBP01222 138 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 MORN3Q6PF18 240 aaPredicted RBP9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 NEGR1Q7Z3B1 354 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 PRADC1Q9BSG0 188 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 C1QTNF4Q9BXJ3 329 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 VCX2Q9H322 139 aa9.33□□□□□ -0.92
SMARCB1-203ENST00000407082 AGRNO00468 2067 aa9.32□□□□□ -0.92
SMARCB1-203ENST00000407082 IGHV3-53P01767 116 aa9.32□□□□□ -0.92
SMARCB1-203ENST00000407082 RBMY1A1P0DJD3 496 aaKnown RBP9.32□□□□□ -0.92
SMARCB1-203ENST00000407082 RBMY1CP0DJD4 496 aa9.32□□□□□ -0.92
SMARCB1-203ENST00000407082 FABP2P12104 132 aa9.32□□□□□ -0.92
SMARCB1-203ENST00000407082 RBMY1FQ15415 496 aaKnown RBP9.32□□□□□ -0.92
SMARCB1-203ENST00000407082 SACSQ9NZJ4 4579 aa9.32□□□□□ -0.92
SMARCB1-203ENST00000407082 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
SMARCB1-203ENST00000407082 K7EP13 123 aa9.31□□□□□ -0.92
SMARCB1-203ENST00000407082 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
SMARCB1-203ENST00000407082 UFSP1Q6NVU6 142 aa9.31□□□□□ -0.92
SMARCB1-203ENST00000407082 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
SMARCB1-203ENST00000407082 SPANXA1Q9NS26 97 aa9.31□□□□□ -0.92
SMARCB1-203ENST00000407082 RPL39P62891 51 aaKnown RBP9.3□□□□□ -0.92
SMARCB1-203ENST00000407082 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
SMARCB1-203ENST00000407082 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
SMARCB1-203ENST00000407082 MAPKAPK5-AS1Q8N8E1 139 aa9.3□□□□□ -0.92
SMARCB1-203ENST00000407082 C11orf72Q8NBR9 251 aa9.3□□□□□ -0.92
SMARCB1-203ENST00000407082 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
SMARCB1-203ENST00000407082 IGLV4-69A0A075B6H9 119 aa9.29□□□□□ -0.92
SMARCB1-203ENST00000407082 A0A1W2PPM0 123 aa9.29□□□□□ -0.92
SMARCB1-203ENST00000407082 H3BUT2 72 aa9.29□□□□□ -0.92
SMARCB1-203ENST00000407082 LGALS3P17931 250 aaKnown RBP9.29□□□□□ -0.92
SMARCB1-203ENST00000407082 COTL1Q14019 142 aa9.29□□□□□ -0.92
SMARCB1-203ENST00000407082 Q6ZVH6 145 aa9.29□□□□□ -0.92
SMARCB1-203ENST00000407082 TRBV10-1A0A0K0K1A3 114 aa9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 K7EP34 96 aa9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 LEPROTO15243 131 aa9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 P0DMU3 169 aa9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 FAM231AP0DMU4 169 aa9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 FAM231CP0DMU5 169 aa9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 XCL2Q9UBD3 114 aa9.28□□□□□ -0.92
SMARCB1-203ENST00000407082 DNAH1Q9P2D7 4330 aa9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 AZU1P20160 251 aa9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 FXYD2P54710 66 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms