RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 TRBV27A0A0K0K1C4 114 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 VCYO14598 125 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 APCSP02743 223 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 KIAA1644Q3SXP7 199 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 COX19Q49B96 90 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 CHCHD5Q9BSY4 110 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
HMGA1P7-201ENST00000406908 TRAV9-2A0A087WT02 112 aa11.36□□□□□ -0.59
HMGA1P7-201ENST00000406908 TMEM262E9PQX1 116 aa11.36□□□□□ -0.59
HMGA1P7-201ENST00000406908 PHOX2AO14813 284 aa11.36□□□□□ -0.59
HMGA1P7-201ENST00000406908 TSHBP01222 138 aa11.36□□□□□ -0.59
HMGA1P7-201ENST00000406908 AMTP48728 403 aa11.36□□□□□ -0.59
HMGA1P7-201ENST00000406908 GAGE6Q13070 117 aa11.36□□□□□ -0.59
HMGA1P7-201ENST00000406908 TMEM243Q9BU79 118 aa11.35□□□□□ -0.59
HMGA1P7-201ENST00000406908 A0A087WX48 190 aa11.34□□□□□ -0.59
HMGA1P7-201ENST00000406908 K7EP13 123 aa11.34□□□□□ -0.59
HMGA1P7-201ENST00000406908 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
HMGA1P7-201ENST00000406908 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
HMGA1P7-201ENST00000406908 MRPL18Q9H0U6 180 aaKnown RBP11.34□□□□□ -0.59
HMGA1P7-201ENST00000406908 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 IBA57-AS1B1ANH7 110 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 MT-ND6P03923 174 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 MPV17L2Q567V2 206 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 C1orf134Q5TEV5 83 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 C10orf126Q8N4M7 172 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 SMIM2Q9BVW6 85 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
HMGA1P7-201ENST00000406908 PRSS47A8MTI9 375 aa11.32□□□□□ -0.6
HMGA1P7-201ENST00000406908 ESDP10768 282 aa11.32□□□□□ -0.6
HMGA1P7-201ENST00000406908 FABP9Q0Z7S8 132 aa11.32□□□□□ -0.6
HMGA1P7-201ENST00000406908 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
HMGA1P7-201ENST00000406908 Q8N976 141 aa11.32□□□□□ -0.6
HMGA1P7-201ENST00000406908 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
HMGA1P7-201ENST00000406908 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
HMGA1P7-201ENST00000406908 LOC389332A0A1B0GUA5 103 aa11.31□□□□□ -0.6
HMGA1P7-201ENST00000406908 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
HMGA1P7-201ENST00000406908 RTL8CO15255 209 aa11.31□□□□□ -0.6
HMGA1P7-201ENST00000406908 RBX1P62877 108 aa11.31□□□□□ -0.6
HMGA1P7-201ENST00000406908 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
HMGA1P7-201ENST00000406908 KLK12Q9UKR0 248 aa11.31□□□□□ -0.6
HMGA1P7-201ENST00000406908 FCER1GP30273 86 aa11.3□□□□□ -0.6
HMGA1P7-201ENST00000406908 PKIAP61925 76 aa11.3□□□□□ -0.6
HMGA1P7-201ENST00000406908 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
HMGA1P7-201ENST00000406908 MAP1LC3AQ9H492 121 aa11.3□□□□□ -0.6
HMGA1P7-201ENST00000406908 UBE2L6O14933 153 aa11.29□□□□□ -0.6
HMGA1P7-201ENST00000406908 TCAPO15273 167 aa11.29□□□□□ -0.6
HMGA1P7-201ENST00000406908 SCO1O75880 301 aa11.29□□□□□ -0.6
HMGA1P7-201ENST00000406908 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
HMGA1P7-201ENST00000406908 IGLV4-60A0A075B6I1 120 aa11.28□□□□□ -0.6
HMGA1P7-201ENST00000406908 A0A1B0GUV1 79 aa11.28□□□□□ -0.6
HMGA1P7-201ENST00000406908 Q8N8P6 123 aa11.28□□□□□ -0.6
HMGA1P7-201ENST00000406908 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
HMGA1P7-201ENST00000406908 H7C423 109 aa11.27□□□□□ -0.61
HMGA1P7-201ENST00000406908 ANGP03950 147 aaKnown RBP11.27□□□□□ -0.61
HMGA1P7-201ENST00000406908 Q6ZRN7 208 aaPredicted RBP11.27□□□□□ -0.61
HMGA1P7-201ENST00000406908 Q9HAA7 133 aa11.27□□□□□ -0.61
HMGA1P7-201ENST00000406908 FAT2Q9NYQ8 4349 aa11.26□□□□□ -0.61
HMGA1P7-201ENST00000406908 COLCA2A8K830 154 aa11.26□□□□□ -0.61
HMGA1P7-201ENST00000406908 ATP6V1G1O75348 118 aa11.26□□□□□ -0.61
HMGA1P7-201ENST00000406908 FGF6P10767 208 aa11.26□□□□□ -0.61
HMGA1P7-201ENST00000406908 LAGE3Q14657 143 aa11.26□□□□□ -0.61
HMGA1P7-201ENST00000406908 UBE2WQ96B02 151 aa11.26□□□□□ -0.61
HMGA1P7-201ENST00000406908 RAB5AP20339 215 aa11.25□□□□□ -0.61
HMGA1P7-201ENST00000406908 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
HMGA1P7-201ENST00000406908 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
HMGA1P7-201ENST00000406908 RNASEKQ6P5S7 137 aaKnown RBP11.25□□□□□ -0.61
HMGA1P7-201ENST00000406908 ENHOQ6UWT2 76 aa11.25□□□□□ -0.61
HMGA1P7-201ENST00000406908 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
HMGA1P7-201ENST00000406908 FRAS1Q86XX4 4008 aa11.24□□□□□ -0.61
HMGA1P7-201ENST00000406908 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
HMGA1P7-201ENST00000406908 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
HMGA1P7-201ENST00000406908 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
HMGA1P7-201ENST00000406908 S100A1P23297 94 aa11.23□□□□□ -0.61
HMGA1P7-201ENST00000406908 CLPSL2Q6UWE3 100 aa11.23□□□□□ -0.61
HMGA1P7-201ENST00000406908 MRPL52Q86TS9 123 aaKnown RBP11.23□□□□□ -0.61
HMGA1P7-201ENST00000406908 PRR34Q9NV39 138 aa11.23□□□□□ -0.61
HMGA1P7-201ENST00000406908 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
HMGA1P7-201ENST00000406908 TNP2Q05952 138 aa11.22□□□□□ -0.61
HMGA1P7-201ENST00000406908 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
HMGA1P7-201ENST00000406908 PRSS3P2Q8NHM4 247 aa11.22□□□□□ -0.61
HMGA1P7-201ENST00000406908 UBE2D4Q9Y2X8 147 aa11.22□□□□□ -0.61
HMGA1P7-201ENST00000406908 PRSS29PA6NIE9 313 aa11.21□□□□□ -0.61
HMGA1P7-201ENST00000406908 CRPP02741 224 aa11.21□□□□□ -0.61
HMGA1P7-201ENST00000406908 ZNF25P17030 456 aaPredicted RBP11.21□□□□□ -0.61
HMGA1P7-201ENST00000406908 REG3AQ06141 175 aa11.21□□□□□ -0.61
HMGA1P7-201ENST00000406908 Q0VG73 95 aa11.21□□□□□ -0.61
HMGA1P7-201ENST00000406908 C18orf32Q8TCD1 76 aa11.21□□□□□ -0.61
HMGA1P7-201ENST00000406908 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
HMGA1P7-201ENST00000406908 K7EMI3 77 aa11.2□□□□□ -0.62
HMGA1P7-201ENST00000406908 TRGC2P03986 189 aa11.2□□□□□ -0.62
HMGA1P7-201ENST00000406908 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
HMGA1P7-201ENST00000406908 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
HMGA1P7-201ENST00000406908 CDC42SE2Q9NRR3 84 aa11.2□□□□□ -0.62
HMGA1P7-201ENST00000406908 MIAQ16674 131 aa11.19□□□□□ -0.62
HMGA1P7-201ENST00000406908 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
HMGA1P7-201ENST00000406908 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
HMGA1P7-201ENST00000406908 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
HMGA1P7-201ENST00000406908 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
HMGA1P7-201ENST00000406908 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms