RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ST20Q9HBF5 79 aa5.79□□□□□ -1.48
GPC3-203ENST00000406757 DNAH6Q9C0G6 4158 aa5.79□□□□□ -1.48
GPC3-203ENST00000406757 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 TRBV10-1A0A0K0K1A3 114 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 SDHAF1A6NFY7 115 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 TCAPO15273 167 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 PPBPP02775 128 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 PMCHP20382 165 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 IFI27P40305 119 aaPredicted RBP5.78□□□□□ -1.48
GPC3-203ENST00000406757 UBE2D3P61077 147 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 UBE2D2P62837 147 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 LGALS9CQ6DKI2 356 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 DNAH2Q9P225 4427 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 ICOSQ9Y6W8 199 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
GPC3-203ENST00000406757 KIAA1109Q2LD37 5005 aa5.77□□□□□ -1.48
GPC3-203ENST00000406757 TRBV6-5A0A0K0K1A5 114 aa5.77□□□□□ -1.49
GPC3-203ENST00000406757 C1orf196B1AJZ1 125 aa5.77□□□□□ -1.49
GPC3-203ENST00000406757 POLR2KP53803 58 aaKnown RBP5.77□□□□□ -1.49
GPC3-203ENST00000406757 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
GPC3-203ENST00000406757 MRPL23Q16540 153 aaKnown RBP5.77□□□□□ -1.49
GPC3-203ENST00000406757 ATP6V0E2Q8NHE4 81 aa5.77□□□□□ -1.49
GPC3-203ENST00000406757 C18orf32Q8TCD1 76 aa5.77□□□□□ -1.49
GPC3-203ENST00000406757 TMEM70Q9BUB7 260 aa5.77□□□□□ -1.49
GPC3-203ENST00000406757 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
GPC3-203ENST00000406757 VCYO14598 125 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BKO60814 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BJP06899 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BOP23527 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BBP33778 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 NDUFA6P56556 154 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BDP58876 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BCP62807 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST2H2BEQ16778 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 ESRGQ1W209 222 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.76□□□□□ -1.49
GPC3-203ENST00000406757 LYPD5Q6UWN5 251 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 NTM-AS1Q6ZSK4 140 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 NIT1Q86X76 327 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 PRSS3P2Q8NHM4 247 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BHQ93079 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 URB1-AS1Q96HZ7 61 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BNQ99877 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 HIST1H2BMQ99879 126 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 C20orf78Q9BR46 151 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 SMIM2Q9BVW6 85 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 APLNQ9ULZ1 77 aa5.76□□□□□ -1.49
GPC3-203ENST00000406757 IGLV2-18A0A075B6J9 118 aa5.75□□□□□ -1.49
GPC3-203ENST00000406757 I3L3M4 83 aa5.75□□□□□ -1.49
GPC3-203ENST00000406757 NUPR1O60356 82 aa5.75□□□□□ -1.49
GPC3-203ENST00000406757 PPP1R17O96001 155 aa5.75□□□□□ -1.49
GPC3-203ENST00000406757 TSHBP01222 138 aa5.75□□□□□ -1.49
GPC3-203ENST00000406757 BAGE3Q86Y29 109 aa5.75□□□□□ -1.49
GPC3-203ENST00000406757 Q8N8P6 123 aa5.75□□□□□ -1.49
GPC3-203ENST00000406757 PKHD1P08F94 4074 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 PRSS47A8MTI9 375 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 H3BNG1 76 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 FCER1GP30273 86 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 COTL1Q14019 142 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 PMCHL1Q16048 86 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 RNASEKQ6P5S7 137 aaKnown RBP5.74□□□□□ -1.49
GPC3-203ENST00000406757 FA2HQ7L5A8 372 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 DAZ4Q86SG3 579 aaKnown RBP5.74□□□□□ -1.49
GPC3-203ENST00000406757 GTSF1LQ9H1H1 148 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 DAZ3Q9NR90 486 aaKnown RBP5.74□□□□□ -1.49
GPC3-203ENST00000406757 LAMTOR2Q9Y2Q5 125 aa5.74□□□□□ -1.49
GPC3-203ENST00000406757 TMA7Q9Y2S6 64 aaKnown RBP5.74□□□□□ -1.49
GPC3-203ENST00000406757 RYR1P21817 5038 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 DYNC1H1Q14204 4646 aaKnown RBP5.73□□□□□ -1.49
GPC3-203ENST00000406757 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.73□□□□□ -1.49
GPC3-203ENST00000406757 TRBV27A0A0K0K1C4 114 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 IGKV2-29A2NJV5 120 aaPredicted RBP5.73□□□□□ -1.49
GPC3-203ENST00000406757 AMTP48728 403 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 LINC00310P59036 64 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 RAB5BP61020 215 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 Q0VG73 95 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 GAGE6Q13070 117 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 ANKRD39Q53RE8 183 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 C15orf53Q8NAA6 179 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 KIR2DL4Q99706 377 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 CHCHD7Q9BUK0 85 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 LINC00588Q9Y4M8 146 aa5.73□□□□□ -1.49
GPC3-203ENST00000406757 TRBV6-8A0A0A6YYG3 113 aa5.72□□□□□ -1.49
GPC3-203ENST00000406757 SERF1AO75920 110 aa5.72□□□□□ -1.49
GPC3-203ENST00000406757 LINC00614P0C842 121 aa5.72□□□□□ -1.49
GPC3-203ENST00000406757 RPL32P62910 135 aaKnown RBP5.72□□□□□ -1.49
GPC3-203ENST00000406757 FAM19A2Q8N3H0 131 aa5.72□□□□□ -1.49
GPC3-203ENST00000406757 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
GPC3-203ENST00000406757 IGHV1-24A0A0C4DH33 117 aa5.71□□□□□ -1.5
GPC3-203ENST00000406757 TMEM262E9PQX1 116 aa5.71□□□□□ -1.5
GPC3-203ENST00000406757 BTF3P20290 206 aaKnown RBP5.71□□□□□ -1.5
GPC3-203ENST00000406757 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
GPC3-203ENST00000406757 LAGE3Q14657 143 aa5.71□□□□□ -1.5
GPC3-203ENST00000406757 PDZD11Q5EBL8 140 aa5.71□□□□□ -1.5
GPC3-203ENST00000406757 SH2D6Q7Z4S9 175 aa5.71□□□□□ -1.5
GPC3-203ENST00000406757 WFDC10BQ8IUB3 73 aa5.71□□□□□ -1.5
GPC3-203ENST00000406757 UBE2DNLQ8IWF7 75 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms